| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is 116493414
Identifier: 116493414
GI number: 116493414
Start: 1663367
End: 1663894
Strand: Direct
Name: 116493414
Synonym: PEPE_1686
Alternate gene names: NA
Gene position: 1663367-1663894 (Clockwise)
Preceding gene: 116493404
Following gene: 116493415
Centisome position: 90.78
GC content: 39.2
Gene sequence:
>528_bases ATGAGTAATATATACGTTAAAAAAGCTCAACCTCAAGATTTACCTGCCATCATGAAAATTATTGATAACGCCAAAGCTTT ATTGAAAGCGGATGGTAGTCCTCAATGGCAAGATGGAAGTCCCGACGAAACTACTTTCATCAATGACATTAATCATGGAA ATTGTTGGGTACTGAAAGTCGATAATCAAATTGCAGGTACCGCCACTTTACTGACCACCCCGGATGCCAACTACGAAAAT ATTTCAGACGGTCAATGGAAAAATACTAGTGCACCATATGCTACTATTCACCGAATTGCTATTTCGCCTGACTACCGCGG AATGTCTCTCGGCAAGTTCTTCCTATCCAATTTAATCACCTTAGGAACGCACGCTGGGATTAATAATTTCCGGATTGATA CGCACGAACTTAATCAGCGAATGCAACACCTTGTTCAACAATTTAATTTTGAATACACCGGTATTATCTATGTTAACCCT ACCGAAGATAGTCGACGTTTAGCCTTTGAACTAAATTTGGAAAACTAA
Upstream 100 bases:
>100_bases TTGTCCAAAAATAACGCAGAGTTCTAATTTCCATTTCCCGATTCTCCAATTTTTTATACTATACTTAATATACAACATAC AATAAAAGGAGCCTAGCTAC
Downstream 100 bases:
>100_bases ATTTAACTTGTTACAATAATTAAATCAAATTTTGAAAGGGAGGAGTCTATTTGGCCTACGTTGGTTTTATCGCATCTGCT ACCGTAATTAAATTAGGACG
Product: acetyltransferase
Products: NA
Alternate protein names: GCN5-Related N-Acetyltransferase; Acetyltransferase GNAT Family; Acetyltransferase Family Protein; Acetyltransferase Gnat Family; Gcn5-Related N-Acetyltransferase; GNAT Family N-Acetyltransferase; Peptidyl-TRNA Hydrolase; GNAT Family Acetyltransferase
Number of amino acids: Translated: 175; Mature: 174
Protein sequence:
>175_residues MSNIYVKKAQPQDLPAIMKIIDNAKALLKADGSPQWQDGSPDETTFINDINHGNCWVLKVDNQIAGTATLLTTPDANYEN ISDGQWKNTSAPYATIHRIAISPDYRGMSLGKFFLSNLITLGTHAGINNFRIDTHELNQRMQHLVQQFNFEYTGIIYVNP TEDSRRLAFELNLEN
Sequences:
>Translated_175_residues MSNIYVKKAQPQDLPAIMKIIDNAKALLKADGSPQWQDGSPDETTFINDINHGNCWVLKVDNQIAGTATLLTTPDANYEN ISDGQWKNTSAPYATIHRIAISPDYRGMSLGKFFLSNLITLGTHAGINNFRIDTHELNQRMQHLVQQFNFEYTGIIYVNP TEDSRRLAFELNLEN >Mature_174_residues SNIYVKKAQPQDLPAIMKIIDNAKALLKADGSPQWQDGSPDETTFINDINHGNCWVLKVDNQIAGTATLLTTPDANYENI SDGQWKNTSAPYATIHRIAISPDYRGMSLGKFFLSNLITLGTHAGINNFRIDTHELNQRMQHLVQQFNFEYTGIIYVNPT EDSRRLAFELNLEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19741; Mature: 19610
Theoretical pI: Translated: 5.55; Mature: 5.55
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNIYVKKAQPQDLPAIMKIIDNAKALLKADGSPQWQDGSPDETTFINDINHGNCWVLKV CCCEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEE DNQIAGTATLLTTPDANYENISDGQWKNTSAPYATIHRIAISPDYRGMSLGKFFLSNLIT CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH LGTHAGINNFRIDTHELNQRMQHLVQQFNFEYTGIIYVNPTEDSRRLAFELNLEN HHCCCCCCCEEECHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCC >Mature Secondary Structure SNIYVKKAQPQDLPAIMKIIDNAKALLKADGSPQWQDGSPDETTFINDINHGNCWVLKV CCEEEECCCCCCHHHHHHHHHCCCEEEECCCCCCCCCCCCCCCEEEECCCCCCEEEEEE DNQIAGTATLLTTPDANYENISDGQWKNTSAPYATIHRIAISPDYRGMSLGKFFLSNLIT CCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCHHHHHHHHHHHH LGTHAGINNFRIDTHELNQRMQHLVQQFNFEYTGIIYVNPTEDSRRLAFELNLEN HHCCCCCCCEEECHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCEEEEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA