Click here to switch to the map view.

The map label for this gene is ywaC [H]

Identifier: 116493391

GI number: 116493391

Start: 1650373

End: 1651083

Strand: Direct

Name: ywaC [H]

Synonym: PEPE_1663

Alternate gene names: 116493391

Gene position: 1650373-1651083 (Clockwise)

Preceding gene: 116493385

Following gene: 116493392

Centisome position: 90.07

GC content: 35.58

Gene sequence:

>711_bases
ATGATTTTAGAACGCAGCAATATGTTTAATAACGAAGGTATCAATAAAGAACTCACACGTGTAATTGGATCTGAACACGT
TCAAGAGTTTAGCAACTTAGTACGTTACTATCGACTTTGCCAGTCCGCCGTAAATGAGATTGGAACCAAGCTTGAAAACT
TGGATGGTGAATATCGAGGAGAATATGACCATAATCCCATTCATCATATGGAACAAAGAATGAAAACTATAACCTCTCTT
TTTAATAAGGCAGAGAAAAAACATTTAGACCGTGATATCGAGTCTATTAAACAAAACATCTTTGATATTGGCGGGATTCG
CGTTGTTACTAACTATATTAGCGATGTTTACACTATCCAAAAAAATCTGCTTTCTCAAAGCGATATTAAACTCATTAAAA
CTAAAGATTACATCAAAAATCCTAAACCTAGTGGTTATCGCAGTGTTCATCTAGTAGTTAGTGTGCCCGTATTTTTGTCT
ACTGGTCCGGTAAACACTCCTGTTGAAATACAGATTCGGACCGTTGGTATGGATATGTGGGCCAGTTTAGAGCATAAGCT
TCGCTATAAGACCAACGTTGCTGACGAAAAAGTAGAACATTTTGAAAATCAGTTAGTCGAAGATGCTAATGAAATTTTTA
AGATTGAATCAAACATGCAAAATATTTATCGTGAATTATCTGACCCACGGGTGTTTAAAGATGAAGGATAA

Upstream 100 bases:

>100_bases
TAGAAAGCGATTACAATCACAAGAATAAAGCCTAAAAAGTTTAATAAAAATAAAATTCTCGTATAATGAATTATATGTAC
AAACCAAGGAGAACGATCAA

Downstream 100 bases:

>100_bases
ATATCCCGTCACGTGTTTTTATGGAGTCCCAATCAAGCTTGATAATTCCGGTCATTACATATTTAATACTGAAATTAAAA
TCCATGCCTGGCGGAATGGC

Product: RelA_SpoT domain-containing protein

Products: NA

Alternate protein names: (p)ppGpp synthase ywaC; Small alarmone synthase 2; SAS 2 [H]

Number of amino acids: Translated: 236; Mature: 236

Protein sequence:

>236_residues
MILERSNMFNNEGINKELTRVIGSEHVQEFSNLVRYYRLCQSAVNEIGTKLENLDGEYRGEYDHNPIHHMEQRMKTITSL
FNKAEKKHLDRDIESIKQNIFDIGGIRVVTNYISDVYTIQKNLLSQSDIKLIKTKDYIKNPKPSGYRSVHLVVSVPVFLS
TGPVNTPVEIQIRTVGMDMWASLEHKLRYKTNVADEKVEHFENQLVEDANEIFKIESNMQNIYRELSDPRVFKDEG

Sequences:

>Translated_236_residues
MILERSNMFNNEGINKELTRVIGSEHVQEFSNLVRYYRLCQSAVNEIGTKLENLDGEYRGEYDHNPIHHMEQRMKTITSL
FNKAEKKHLDRDIESIKQNIFDIGGIRVVTNYISDVYTIQKNLLSQSDIKLIKTKDYIKNPKPSGYRSVHLVVSVPVFLS
TGPVNTPVEIQIRTVGMDMWASLEHKLRYKTNVADEKVEHFENQLVEDANEIFKIESNMQNIYRELSDPRVFKDEG
>Mature_236_residues
MILERSNMFNNEGINKELTRVIGSEHVQEFSNLVRYYRLCQSAVNEIGTKLENLDGEYRGEYDHNPIHHMEQRMKTITSL
FNKAEKKHLDRDIESIKQNIFDIGGIRVVTNYISDVYTIQKNLLSQSDIKLIKTKDYIKNPKPSGYRSVHLVVSVPVFLS
TGPVNTPVEIQIRTVGMDMWASLEHKLRYKTNVADEKVEHFENQLVEDANEIFKIESNMQNIYRELSDPRVFKDEG

Specific function: Functions as a (p)ppGpp synthase. In eubacteria ppGpp (guanosine 3'-diphosphate 5-' diphosphate) is a mediator of the stringent response that coordinates a variety of cellular activities in response to changes in nutritional abundance. activities in respo

COG id: COG2357

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the relA/spoT family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007685 [H]

Pfam domain/function: PF04607 RelA_SpoT [H]

EC number: =2.7.6.5 [H]

Molecular weight: Translated: 27480; Mature: 27480

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MILERSNMFNNEGINKELTRVIGSEHVQEFSNLVRYYRLCQSAVNEIGTKLENLDGEYRG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EYDHNPIHHMEQRMKTITSLFNKAEKKHLDRDIESIKQNIFDIGGIRVVTNYISDVYTIQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KNLLSQSDIKLIKTKDYIKNPKPSGYRSVHLVVSVPVFLSTGPVNTPVEIQIRTVGMDMW
HHHHCCCCHHHHCCHHHHCCCCCCCCCEEEEEEEECHHEECCCCCCCEEEEEEEECHHHH
ASLEHKLRYKTNVADEKVEHFENQLVEDANEIFKIESNMQNIYRELSDPRVFKDEG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure
MILERSNMFNNEGINKELTRVIGSEHVQEFSNLVRYYRLCQSAVNEIGTKLENLDGEYRG
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
EYDHNPIHHMEQRMKTITSLFNKAEKKHLDRDIESIKQNIFDIGGIRVVTNYISDVYTIQ
CCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH
KNLLSQSDIKLIKTKDYIKNPKPSGYRSVHLVVSVPVFLSTGPVNTPVEIQIRTVGMDMW
HHHHCCCCHHHHCCHHHHCCCCCCCCCEEEEEEEECHHEECCCCCCCEEEEEEEECHHHH
ASLEHKLRYKTNVADEKVEHFENQLVEDANEIFKIESNMQNIYRELSDPRVFKDEG
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7934828; 9384377 [H]