Click here to switch to the map view.

The map label for this gene is bioY [H]

Identifier: 116493365

GI number: 116493365

Start: 1621269

End: 1621829

Strand: Reverse

Name: bioY [H]

Synonym: PEPE_1637

Alternate gene names: 116493365

Gene position: 1621829-1621269 (Counterclockwise)

Preceding gene: 116493366

Following gene: 116493364

Centisome position: 88.51

GC content: 37.43

Gene sequence:

>561_bases
ATGGAGAGAAGCAACCAAAGTGCAGTAAAAATGATGACTTTAGCAGCAATGATAACAGCTTTAACGATTGTGATGGGGCT
GATGCCTAGAATTCCGCTCTTGTTAATTCCAGTTCCCATTGTCTTACAAAATATGGGAGTAATGATGGCTGGTGACATGC
TAGGTACTAGATATGGAACGTTATCAGTAGGAATATTTTTATTATTAGTAAGTTTGGGATTGCCAATCCTTTCCGGTGGT
TTAGGTGGTGCCGTAGTATTTTTAGGAGCTACCGGGGGCTATTTAGTGGCTTGGTTGTTTGCGCCACTAGTAATTAATTT
AATCAAGAATGTTTTGAAAGGCAAAATTAAGAATCAATTAATACTTAGTTTACTTTCTGTTTGGCTTGGAGGAGCAGTTT
TTATTGATGTATTTGGTGCGTTCTGGTTAGCGATTCAAGCACCCATGCCACTTTCAACGGCCATGTTTTCTACTTTATTA
TTTATCTCAGGTGATACAATCAAAGCTATTTTAGTAATTATCATAGCCAATCGATTGGAGAAGATAGTACACTTAAACTA
G

Upstream 100 bases:

>100_bases
ATCGATTAAAAAATCTGTAATAGTAACCTTATTTTATAAAAATAGGTTACTATTATATATAATGAATTTGTTTCAAAATT
AAAGAAGGTAGGTTTTAAAA

Downstream 100 bases:

>100_bases
TTAAATAGATTAAGGGTGGTTATAAGATGGGGAATAAAACAAGCCAAAAAGTTTTATTAGAATTATTGAAAGATCGAGAT
CGTTGGGTATCTGGAAATGA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MERSNQSAVKMMTLAAMITALTIVMGLMPRIPLLLIPVPIVLQNMGVMMAGDMLGTRYGTLSVGIFLLLVSLGLPILSGG
LGGAVVFLGATGGYLVAWLFAPLVINLIKNVLKGKIKNQLILSLLSVWLGGAVFIDVFGAFWLAIQAPMPLSTAMFSTLL
FISGDTIKAILVIIIANRLEKIVHLN

Sequences:

>Translated_186_residues
MERSNQSAVKMMTLAAMITALTIVMGLMPRIPLLLIPVPIVLQNMGVMMAGDMLGTRYGTLSVGIFLLLVSLGLPILSGG
LGGAVVFLGATGGYLVAWLFAPLVINLIKNVLKGKIKNQLILSLLSVWLGGAVFIDVFGAFWLAIQAPMPLSTAMFSTLL
FISGDTIKAILVIIIANRLEKIVHLN
>Mature_186_residues
MERSNQSAVKMMTLAAMITALTIVMGLMPRIPLLLIPVPIVLQNMGVMMAGDMLGTRYGTLSVGIFLLLVSLGLPILSGG
LGGAVVFLGATGGYLVAWLFAPLVINLIKNVLKGKIKNQLILSLLSVWLGGAVFIDVFGAFWLAIQAPMPLSTAMFSTLL
FISGDTIKAILVIIIANRLEKIVHLN

Specific function: Probable biotin transporter [H]

COG id: COG1268

COG function: function code R; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the BioY family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003784 [H]

Pfam domain/function: PF02632 BioY [H]

EC number: NA

Molecular weight: Translated: 19804; Mature: 19804

Theoretical pI: Translated: 10.75; Mature: 10.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.5 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
6.5 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MERSNQSAVKMMTLAAMITALTIVMGLMPRIPLLLIPVPIVLQNMGVMMAGDMLGTRYGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LSVGIFLLLVSLGLPILSGGLGGAVVFLGATGGYLVAWLFAPLVINLIKNVLKGKIKNQL
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSLLSVWLGGAVFIDVFGAFWLAIQAPMPLSTAMFSTLLFISGDTIKAILVIIIANRLE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KIVHLN
HHHCCC
>Mature Secondary Structure
MERSNQSAVKMMTLAAMITALTIVMGLMPRIPLLLIPVPIVLQNMGVMMAGDMLGTRYGT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHH
LSVGIFLLLVSLGLPILSGGLGGAVVFLGATGGYLVAWLFAPLVINLIKNVLKGKIKNQL
HHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ILSLLSVWLGGAVFIDVFGAFWLAIQAPMPLSTAMFSTLLFISGDTIKAILVIIIANRLE
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHH
KIVHLN
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9579061; 9384377 [H]