The gene/protein map for NC_009784 is currently unavailable.
Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is arcC1 [H]

Identifier: 116493358

GI number: 116493358

Start: 1613181

End: 1614110

Strand: Reverse

Name: arcC1 [H]

Synonym: PEPE_1630

Alternate gene names: 116493358

Gene position: 1614110-1613181 (Counterclockwise)

Preceding gene: 116493359

Following gene: 116493357

Centisome position: 88.09

GC content: 39.89

Gene sequence:

>930_bases
ATGTCAAAAATGGTGGTTGCCTTAGGTGGTAATGCTTTAGGAAAGAGCCCTGAGGAACAGTTACAGTTAGTGAAAAATAC
GGCTGCATCATTGATTGGTTTGGTACGTGATGATCATCAAGTAGTAATTAGTCATGGGAATGGTCCTCAAGTTGGGCAAA
TCAATCTTGGGATGAACTACGCCGCCGAACATGGTAAAACAGCAGCTTTTCCGTTCCCAGAGTGTGGGGCAATGAGTCAG
GGTTATATAGGTTATCATCTACAACAAAGTTTACAAAATGAACTTGCAAAACGAAACATGGATAAAAATGTTGTGACAAC
TATAACTCAAATTGAAGTTGACCAAGATGATACTGCTTTTCAAAAACCGACTAAACCAGTGGGTGATTTCTACAGCAAAG
AACAAGCCGCACAAATTGAAGCTGAAAAAGGATATACATTTGTCGAAGATGCAGGACGTGGATATCGCCAAGTTGTAGCT
TCTCCATTACCAAAATCAATTATTGAAATCAATAGTATTAAAACGCTTGTCGAACACGGTGATTTGGTAATCGCTGGCGG
TGGTGGTGGCGTTCCAGTCATTAAAACTGAAACTGGCTTAAAGGGAGTACCAGCTGTAATTGATAAAGATCGTTCGAGCG
CCTTGCTAGCTGATAACATCGATGCCGATAAATTAATTATTCTCACAGCTGTTGACTATGTTTACGTTAACTATAATAAG
CCAGAACAAAAAGTACTCAAGCAACTAAGCGTTGAAGAAGCCCAAAAGTACATGGATGACGGACAATTTGCAGCTGGAAG
TATGCTACCAAAAGTACAGGCATGCTTATCTTTTGTTAAGGGACACCCTGAACGTGAAGCAATTATTACCTCATTAAATG
GTTTGGATGACGCTTTGAAAGGTAATTTAGGTACAGTAATTCACGGCTAA

Upstream 100 bases:

>100_bases
GAAAGTAGTCAATCAGTTGTATTCCAAGAAGCTGAAAATCGGATGCACACAATTAAAGCTGTCATGGTTGCAACTTTAGG
TGACTAAGGAGGGCGAGTTT

Downstream 100 bases:

>100_bases
ATAATTTATTTAAGTACCAGGTAGAAAAAATAAGAATAGGAGTGTGATTATAGTGGCGAACGCAATTCATGTAACTTCAG
AAATCGGAAAACTTAAGACA

Product: carbamate kinase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 309; Mature: 308

Protein sequence:

>309_residues
MSKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNYAAEHGKTAAFPFPECGAMSQ
GYIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAFQKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVA
SPLPKSIIEINSIKTLVEHGDLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNK
PEQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALKGNLGTVIHG

Sequences:

>Translated_309_residues
MSKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNYAAEHGKTAAFPFPECGAMSQ
GYIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAFQKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVA
SPLPKSIIEINSIKTLVEHGDLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNK
PEQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALKGNLGTVIHG
>Mature_308_residues
SKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNYAAEHGKTAAFPFPECGAMSQG
YIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAFQKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVAS
PLPKSIIEINSIKTLVEHGDLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNKP
EQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALKGNLGTVIHG

Specific function: Unknown

COG id: COG0549

COG function: function code E; Carbamate kinase

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbamate kinase family [H]

Homologues:

Organism=Escherichia coli, GI1789238, Length=306, Percent_Identity=49.3464052287582, Blast_Score=291, Evalue=3e-80,
Organism=Escherichia coli, GI1786516, Length=311, Percent_Identity=44.6945337620579, Blast_Score=223, Evalue=8e-60,
Organism=Escherichia coli, GI1786732, Length=312, Percent_Identity=39.7435897435897, Blast_Score=180, Evalue=1e-46,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001048
- InterPro:   IPR003964 [H]

Pfam domain/function: PF00696 AA_kinase [H]

EC number: =2.7.2.2 [H]

Molecular weight: Translated: 33132; Mature: 33001

Theoretical pI: Translated: 5.39; Mature: 5.39

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNY
CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCC
AAEHGKTAAFPFPECGAMSQGYIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAF
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHH
QKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVASPLPKSIIEINSIKTLVEHG
CCCCCCHHHHHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCC
DLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNK
CEEEECCCCCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCEEEEEEEEEEEEECCC
PEQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALK
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHC
GNLGTVIHG
CCCCCEECC
>Mature Secondary Structure 
SKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNY
CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCC
AAEHGKTAAFPFPECGAMSQGYIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAF
HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHH
QKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVASPLPKSIIEINSIKTLVEHG
CCCCCCHHHHHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCC
DLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNK
CEEEECCCCCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCEEEEEEEEEEEEECCC
PEQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALK
HHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHC
GNLGTVIHG
CCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA