| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is arcC1 [H]
Identifier: 116493358
GI number: 116493358
Start: 1613181
End: 1614110
Strand: Reverse
Name: arcC1 [H]
Synonym: PEPE_1630
Alternate gene names: 116493358
Gene position: 1614110-1613181 (Counterclockwise)
Preceding gene: 116493359
Following gene: 116493357
Centisome position: 88.09
GC content: 39.89
Gene sequence:
>930_bases ATGTCAAAAATGGTGGTTGCCTTAGGTGGTAATGCTTTAGGAAAGAGCCCTGAGGAACAGTTACAGTTAGTGAAAAATAC GGCTGCATCATTGATTGGTTTGGTACGTGATGATCATCAAGTAGTAATTAGTCATGGGAATGGTCCTCAAGTTGGGCAAA TCAATCTTGGGATGAACTACGCCGCCGAACATGGTAAAACAGCAGCTTTTCCGTTCCCAGAGTGTGGGGCAATGAGTCAG GGTTATATAGGTTATCATCTACAACAAAGTTTACAAAATGAACTTGCAAAACGAAACATGGATAAAAATGTTGTGACAAC TATAACTCAAATTGAAGTTGACCAAGATGATACTGCTTTTCAAAAACCGACTAAACCAGTGGGTGATTTCTACAGCAAAG AACAAGCCGCACAAATTGAAGCTGAAAAAGGATATACATTTGTCGAAGATGCAGGACGTGGATATCGCCAAGTTGTAGCT TCTCCATTACCAAAATCAATTATTGAAATCAATAGTATTAAAACGCTTGTCGAACACGGTGATTTGGTAATCGCTGGCGG TGGTGGTGGCGTTCCAGTCATTAAAACTGAAACTGGCTTAAAGGGAGTACCAGCTGTAATTGATAAAGATCGTTCGAGCG CCTTGCTAGCTGATAACATCGATGCCGATAAATTAATTATTCTCACAGCTGTTGACTATGTTTACGTTAACTATAATAAG CCAGAACAAAAAGTACTCAAGCAACTAAGCGTTGAAGAAGCCCAAAAGTACATGGATGACGGACAATTTGCAGCTGGAAG TATGCTACCAAAAGTACAGGCATGCTTATCTTTTGTTAAGGGACACCCTGAACGTGAAGCAATTATTACCTCATTAAATG GTTTGGATGACGCTTTGAAAGGTAATTTAGGTACAGTAATTCACGGCTAA
Upstream 100 bases:
>100_bases GAAAGTAGTCAATCAGTTGTATTCCAAGAAGCTGAAAATCGGATGCACACAATTAAAGCTGTCATGGTTGCAACTTTAGG TGACTAAGGAGGGCGAGTTT
Downstream 100 bases:
>100_bases ATAATTTATTTAAGTACCAGGTAGAAAAAATAAGAATAGGAGTGTGATTATAGTGGCGAACGCAATTCATGTAACTTCAG AAATCGGAAAACTTAAGACA
Product: carbamate kinase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 309; Mature: 308
Protein sequence:
>309_residues MSKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNYAAEHGKTAAFPFPECGAMSQ GYIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAFQKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVA SPLPKSIIEINSIKTLVEHGDLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNK PEQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALKGNLGTVIHG
Sequences:
>Translated_309_residues MSKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNYAAEHGKTAAFPFPECGAMSQ GYIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAFQKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVA SPLPKSIIEINSIKTLVEHGDLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNK PEQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALKGNLGTVIHG >Mature_308_residues SKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNYAAEHGKTAAFPFPECGAMSQG YIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAFQKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVAS PLPKSIIEINSIKTLVEHGDLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNKP EQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALKGNLGTVIHG
Specific function: Unknown
COG id: COG0549
COG function: function code E; Carbamate kinase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the carbamate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1789238, Length=306, Percent_Identity=49.3464052287582, Blast_Score=291, Evalue=3e-80, Organism=Escherichia coli, GI1786516, Length=311, Percent_Identity=44.6945337620579, Blast_Score=223, Evalue=8e-60, Organism=Escherichia coli, GI1786732, Length=312, Percent_Identity=39.7435897435897, Blast_Score=180, Evalue=1e-46,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001048 - InterPro: IPR003964 [H]
Pfam domain/function: PF00696 AA_kinase [H]
EC number: =2.7.2.2 [H]
Molecular weight: Translated: 33132; Mature: 33001
Theoretical pI: Translated: 5.39; Mature: 5.39
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNY CCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCC AAEHGKTAAFPFPECGAMSQGYIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAF HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHH QKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVASPLPKSIIEINSIKTLVEHG CCCCCCHHHHHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCC DLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNK CEEEECCCCCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCEEEEEEEEEEEEECCC PEQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALK HHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHC GNLGTVIHG CCCCCEECC >Mature Secondary Structure SKMVVALGGNALGKSPEEQLQLVKNTAASLIGLVRDDHQVVISHGNGPQVGQINLGMNY CCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCCCEEEEECCCCC AAEHGKTAAFPFPECGAMSQGYIGYHLQQSLQNELAKRNMDKNVVTTITQIEVDQDDTAF HHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEEEEEEECCCCCHH QKPTKPVGDFYSKEQAAQIEAEKGYTFVEDAGRGYRQVVASPLPKSIIEINSIKTLVEHG CCCCCCHHHHHHHHHHHHHHHHCCCEEEHHCCCHHHHHHHCCCCHHHHHHHHHHHHHHCC DLVIAGGGGGVPVIKTETGLKGVPAVIDKDRSSALLADNIDADKLIILTAVDYVYVNYNK CEEEECCCCCCEEEEECCCCCCCCHHHCCCCCCEEEECCCCCCCEEEEEEEEEEEEECCC PEQKVLKQLSVEEAQKYMDDGQFAAGSMLPKVQACLSFVKGHPEREAIITSLNGLDDALK HHHHHHHHHHHHHHHHHHCCCCCCHHHCCHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHC GNLGTVIHG CCCCCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA