| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is cshA [H]
Identifier: 116493289
GI number: 116493289
Start: 1529210
End: 1530790
Strand: Reverse
Name: cshA [H]
Synonym: PEPE_1561
Alternate gene names: 116493289
Gene position: 1530790-1529210 (Counterclockwise)
Preceding gene: 116493290
Following gene: 116493288
Centisome position: 83.54
GC content: 40.8
Gene sequence:
>1581_bases TTGAAATTTACCGAACTAGGGTTAGACGAAGACATTTTAAAAGCAGTTTTAGACAATGGGTATGACGAACCAACACCTAT CCAAGCTGAAACTATTCCTGGTGTTTTAGAAGGAAAAGACATCATTGGACAAGCTCAAACAGGTACTGGTAAGACAGCTG CTTTCGGATTACCAATCCTACAAAATGTTGACCTAGATAATCCTAACATTCAAGCAATTATTATCTCACCTACACGTGAG TTAGCTGCTCAAACACAAGCAGAAATCTTTAAATTAGGAAAATATAAAAAAGCTAAAGTTCAAGTGGTTTACGGTGGATC AGATATCCGTCGTCAGATTAATGCTTTAAAGAGCCATCCACAAATCGTGGTTGGTACACCTGGTCGTTTGTTGGACCATA TTGGTCGAAAGACAATTCGTTTAGACCACGTTAAAACATTAGTTCTTGATGAAGCTGACGATATGCTAGATATGGGATTC TTACCTGATATCGAACACATTATTGAACAAACACCTAGCGAACGCCAAACATTATTGTTCTCAGCCACAATGCCAGCACC AATTAAGAAAATTGGTGTTAAGTTCATGACTGATCCAAAACAAATTACAGTTAAGTCTAAAGAACTTACTGCTGATTTGG TTGATCAATACTACGTTCGTTCTAAAGAATTCGAAAAATTTGATATTTTAACCCGCGTACTTGATGTACAAGCACCAAAA CTTGCAGTTATTTTTGGTCGTACTAAGCGTCGCGTTGATGAAGTTTCTAAGGGATTAGTTACTCGTGGTTACAATGCTGC TGGAATCCATGGTGATTTAACTCAACAACGCCGGATGAGTATTTTACGTCAATTCCGTGAAGGACAATTAGATATTTTAG TTGCTACTGACGTTGCTGCACGTGGGCTTGATATCTCTGGTGTAACTCACGTTTACAACTATGATATTCCTCAAGACCCA GAAAGTTATGTTCACCGTATTGGTCGTACAGGCCGGGCCGGTGCTACAGGTACTTCAGTAACCTTCGTTACTAACTGGGA AATGGACTATCTTCGTGACGTTGAACATTTGACAAAGAAACGTTTGTTACCAATGAAGCCACCAACAGAAGAAGAAGCTT TTGCTGGACGTGCTGCAATGGCTGAACAAAGCATTGAAGAATTGGTTCAAAAAACAGATGTTGCTAAGTTCGAAGAACAA GTTGATCATCTTTTAGAACAACATGATGCTAAAACGCTGGTTGCTGCACTTCTAAATGAAGTAACTAAGTCTGACGCTAG TGAAATCAAAGTTAAGATTACTCCTGAACGCCCACTTCCTCGTAAAAAAGGTGGCAACAAAGGCGGTAAAGGTGGCGGCG GATACCGTGGCGGAAACCATCGTGGTGGTAATGGTCGTCGTAGTAATGGTAATAGCAGCAATGGCGGGGGCCGTGGTGGT AAATGGAATAACGATCGTAAGGGTGGCGGCAAGTCACGCTTTGGTCGCGATGACCGTAACCACAATGGTGGTAAGCGTAA TGATCGCAACTCAGGTAACAAGGGTGGATCAAACCGTCAATTTGTAATTAAAGAAAAATAA
Upstream 100 bases:
>100_bases ATGATTATAAAGTTATGTTTACACGATTGTCACCGTGGGCGCGGCCCTAAAAGGACGGATTTTCTTTGATGCGGTGACGA AAATTTAGGAGGAATTATAT
Downstream 100 bases:
>100_bases ACATTTTCAATAAACTAAGGGGCCCGGAAAATACATTTTTTCTTGACCTCTTTTTTTGATACAATAGGAACGACATTGGA GGTACTAGGATGATTTACGG
Product: superfamily II DNA/RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 526
Protein sequence:
>526_residues MKFTELGLDEDILKAVLDNGYDEPTPIQAETIPGVLEGKDIIGQAQTGTGKTAAFGLPILQNVDLDNPNIQAIIISPTRE LAAQTQAEIFKLGKYKKAKVQVVYGGSDIRRQINALKSHPQIVVGTPGRLLDHIGRKTIRLDHVKTLVLDEADDMLDMGF LPDIEHIIEQTPSERQTLLFSATMPAPIKKIGVKFMTDPKQITVKSKELTADLVDQYYVRSKEFEKFDILTRVLDVQAPK LAVIFGRTKRRVDEVSKGLVTRGYNAAGIHGDLTQQRRMSILRQFREGQLDILVATDVAARGLDISGVTHVYNYDIPQDP ESYVHRIGRTGRAGATGTSVTFVTNWEMDYLRDVEHLTKKRLLPMKPPTEEEAFAGRAAMAEQSIEELVQKTDVAKFEEQ VDHLLEQHDAKTLVAALLNEVTKSDASEIKVKITPERPLPRKKGGNKGGKGGGGYRGGNHRGGNGRRSNGNSSNGGGRGG KWNNDRKGGGKSRFGRDDRNHNGGKRNDRNSGNKGGSNRQFVIKEK
Sequences:
>Translated_526_residues MKFTELGLDEDILKAVLDNGYDEPTPIQAETIPGVLEGKDIIGQAQTGTGKTAAFGLPILQNVDLDNPNIQAIIISPTRE LAAQTQAEIFKLGKYKKAKVQVVYGGSDIRRQINALKSHPQIVVGTPGRLLDHIGRKTIRLDHVKTLVLDEADDMLDMGF LPDIEHIIEQTPSERQTLLFSATMPAPIKKIGVKFMTDPKQITVKSKELTADLVDQYYVRSKEFEKFDILTRVLDVQAPK LAVIFGRTKRRVDEVSKGLVTRGYNAAGIHGDLTQQRRMSILRQFREGQLDILVATDVAARGLDISGVTHVYNYDIPQDP ESYVHRIGRTGRAGATGTSVTFVTNWEMDYLRDVEHLTKKRLLPMKPPTEEEAFAGRAAMAEQSIEELVQKTDVAKFEEQ VDHLLEQHDAKTLVAALLNEVTKSDASEIKVKITPERPLPRKKGGNKGGKGGGGYRGGNHRGGNGRRSNGNSSNGGGRGG KWNNDRKGGGKSRFGRDDRNHNGGKRNDRNSGNKGGSNRQFVIKEK >Mature_526_residues MKFTELGLDEDILKAVLDNGYDEPTPIQAETIPGVLEGKDIIGQAQTGTGKTAAFGLPILQNVDLDNPNIQAIIISPTRE LAAQTQAEIFKLGKYKKAKVQVVYGGSDIRRQINALKSHPQIVVGTPGRLLDHIGRKTIRLDHVKTLVLDEADDMLDMGF LPDIEHIIEQTPSERQTLLFSATMPAPIKKIGVKFMTDPKQITVKSKELTADLVDQYYVRSKEFEKFDILTRVLDVQAPK LAVIFGRTKRRVDEVSKGLVTRGYNAAGIHGDLTQQRRMSILRQFREGQLDILVATDVAARGLDISGVTHVYNYDIPQDP ESYVHRIGRTGRAGATGTSVTFVTNWEMDYLRDVEHLTKKRLLPMKPPTEEEAFAGRAAMAEQSIEELVQKTDVAKFEEQ VDHLLEQHDAKTLVAALLNEVTKSDASEIKVKITPERPLPRKKGGNKGGKGGGGYRGGNHRGGNGRRSNGNSSNGGGRGG KWNNDRKGGGKSRFGRDDRNHNGGKRNDRNSGNKGGSNRQFVIKEK
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures. Unwinds dsRNA in both 5'- and 3'-directions and shows RNA-dependent ATPase activity [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI7661920, Length=366, Percent_Identity=40.4371584699454, Blast_Score=295, Evalue=6e-80, Organism=Homo sapiens, GI4503529, Length=355, Percent_Identity=40, Blast_Score=268, Evalue=7e-72, Organism=Homo sapiens, GI83700235, Length=367, Percent_Identity=39.5095367847411, Blast_Score=268, Evalue=1e-71, Organism=Homo sapiens, GI20149629, Length=382, Percent_Identity=38.7434554973822, Blast_Score=263, Evalue=3e-70, Organism=Homo sapiens, GI301171467, Length=378, Percent_Identity=39.9470899470899, Blast_Score=257, Evalue=1e-68, Organism=Homo sapiens, GI87196351, Length=378, Percent_Identity=39.9470899470899, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI301171475, Length=378, Percent_Identity=39.9470899470899, Blast_Score=257, Evalue=2e-68, Organism=Homo sapiens, GI169881239, Length=378, Percent_Identity=39.9470899470899, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI13514809, Length=378, Percent_Identity=39.9470899470899, Blast_Score=256, Evalue=3e-68, Organism=Homo sapiens, GI45446747, Length=376, Percent_Identity=37.5, Blast_Score=254, Evalue=9e-68, Organism=Homo sapiens, GI45446743, Length=376, Percent_Identity=37.5, Blast_Score=254, Evalue=9e-68, Organism=Homo sapiens, GI148613856, Length=365, Percent_Identity=37.8082191780822, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI38201710, Length=365, Percent_Identity=37.8082191780822, Blast_Score=253, Evalue=4e-67, Organism=Homo sapiens, GI21040371, Length=347, Percent_Identity=38.0403458213257, Blast_Score=252, Evalue=6e-67, Organism=Homo sapiens, GI224593278, Length=375, Percent_Identity=37.6, Blast_Score=252, Evalue=7e-67, Organism=Homo sapiens, GI164664518, Length=355, Percent_Identity=36.9014084507042, Blast_Score=251, Evalue=8e-67, Organism=Homo sapiens, GI4758112, Length=347, Percent_Identity=38.328530259366, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI18375623, Length=347, Percent_Identity=38.328530259366, Blast_Score=251, Evalue=2e-66, Organism=Homo sapiens, GI4758138, Length=355, Percent_Identity=37.4647887323944, Blast_Score=248, Evalue=9e-66, Organism=Homo sapiens, GI41327773, Length=362, Percent_Identity=37.292817679558, Blast_Score=241, Evalue=1e-63, Organism=Homo sapiens, GI216548263, Length=359, Percent_Identity=38.4401114206128, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI13518015, Length=359, Percent_Identity=38.4401114206128, Blast_Score=240, Evalue=2e-63, Organism=Homo sapiens, GI262231852, Length=359, Percent_Identity=38.4401114206128, Blast_Score=240, Evalue=3e-63, Organism=Homo sapiens, GI262118318, Length=358, Percent_Identity=38.5474860335196, Blast_Score=239, Evalue=6e-63, Organism=Homo sapiens, GI222352149, Length=343, Percent_Identity=38.7755102040816, Blast_Score=238, Evalue=1e-62, Organism=Homo sapiens, GI21071032, Length=357, Percent_Identity=38.0952380952381, Blast_Score=238, Evalue=2e-62, Organism=Homo sapiens, GI41327771, Length=377, Percent_Identity=37.1352785145889, Blast_Score=237, Evalue=2e-62, Organism=Homo sapiens, GI31542656, Length=469, Percent_Identity=33.0490405117271, Blast_Score=234, Evalue=1e-61, Organism=Homo sapiens, GI51094101, Length=395, Percent_Identity=33.6708860759494, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI164419743, Length=395, Percent_Identity=33.6708860759494, Blast_Score=230, Evalue=3e-60, Organism=Homo sapiens, GI41327776, Length=382, Percent_Identity=36.1256544502618, Blast_Score=228, Evalue=1e-59, Organism=Homo sapiens, GI13129006, Length=379, Percent_Identity=38.7862796833773, Blast_Score=226, Evalue=5e-59, Organism=Homo sapiens, GI55749865, Length=344, Percent_Identity=37.2093023255814, Blast_Score=226, Evalue=6e-59, Organism=Homo sapiens, GI50659095, Length=424, Percent_Identity=33.7264150943396, Blast_Score=216, Evalue=5e-56, Organism=Homo sapiens, GI188035877, Length=351, Percent_Identity=35.8974358974359, Blast_Score=216, Evalue=6e-56, Organism=Homo sapiens, GI6005743, Length=372, Percent_Identity=37.0967741935484, Blast_Score=208, Evalue=9e-54, Organism=Homo sapiens, GI8922886, Length=372, Percent_Identity=36.8279569892473, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI13514831, Length=351, Percent_Identity=34.1880341880342, Blast_Score=203, Evalue=4e-52, Organism=Homo sapiens, GI62241022, Length=355, Percent_Identity=37.1830985915493, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI164419732, Length=349, Percent_Identity=35.8166189111748, Blast_Score=200, Evalue=3e-51, Organism=Homo sapiens, GI41327779, Length=382, Percent_Identity=35.3403141361257, Blast_Score=197, Evalue=1e-50, Organism=Homo sapiens, GI62241024, Length=334, Percent_Identity=37.7245508982036, Blast_Score=192, Evalue=8e-49, Organism=Homo sapiens, GI9506931, Length=456, Percent_Identity=30.9210526315789, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI256223453, Length=385, Percent_Identity=30.9090909090909, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38327634, Length=393, Percent_Identity=31.2977099236641, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI38569505, Length=371, Percent_Identity=30.9973045822102, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI38569503, Length=371, Percent_Identity=30.9973045822102, Blast_Score=179, Evalue=4e-45, Organism=Homo sapiens, GI256773275, Length=397, Percent_Identity=29.7229219143577, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI17505907, Length=417, Percent_Identity=30.4556354916067, Blast_Score=166, Evalue=6e-41, Organism=Homo sapiens, GI9966805, Length=304, Percent_Identity=31.9078947368421, Blast_Score=144, Evalue=2e-34, Organism=Homo sapiens, GI4826686, Length=337, Percent_Identity=30.8605341246291, Blast_Score=141, Evalue=2e-33, Organism=Homo sapiens, GI154759257, Length=450, Percent_Identity=28.2222222222222, Blast_Score=135, Evalue=1e-31, Organism=Homo sapiens, GI20336298, Length=217, Percent_Identity=35.4838709677419, Blast_Score=110, Evalue=2e-24, Organism=Escherichia coli, GI87082221, Length=447, Percent_Identity=42.5055928411633, Blast_Score=345, Evalue=3e-96, Organism=Escherichia coli, GI1787016, Length=368, Percent_Identity=44.0217391304348, Blast_Score=306, Evalue=3e-84, Organism=Escherichia coli, GI1787605, Length=368, Percent_Identity=41.0326086956522, Blast_Score=277, Evalue=9e-76, Organism=Escherichia coli, GI1790214, Length=353, Percent_Identity=39.6600566572238, Blast_Score=261, Evalue=8e-71, Organism=Escherichia coli, GI1788930, Length=336, Percent_Identity=39.5833333333333, Blast_Score=234, Evalue=1e-62, Organism=Escherichia coli, GI48994977, Length=348, Percent_Identity=25, Blast_Score=83, Evalue=4e-17, Organism=Caenorhabditis elegans, GI71995724, Length=366, Percent_Identity=40.1639344262295, Blast_Score=290, Evalue=1e-78, Organism=Caenorhabditis elegans, GI17507121, Length=366, Percent_Identity=39.8907103825137, Blast_Score=290, Evalue=2e-78, Organism=Caenorhabditis elegans, GI71987143, Length=364, Percent_Identity=38.4615384615385, Blast_Score=284, Evalue=9e-77, Organism=Caenorhabditis elegans, GI17555296, Length=362, Percent_Identity=38.3977900552486, Blast_Score=258, Evalue=5e-69, Organism=Caenorhabditis elegans, GI17552114, Length=386, Percent_Identity=34.1968911917098, Blast_Score=254, Evalue=6e-68, Organism=Caenorhabditis elegans, GI17510307, Length=376, Percent_Identity=39.3617021276596, Blast_Score=250, Evalue=2e-66, Organism=Caenorhabditis elegans, GI17510309, Length=376, Percent_Identity=39.3617021276596, Blast_Score=249, Evalue=2e-66, Organism=Caenorhabditis elegans, GI71995514, Length=376, Percent_Identity=39.3617021276596, Blast_Score=249, Evalue=3e-66, Organism=Caenorhabditis elegans, GI71999644, Length=356, Percent_Identity=36.7977528089888, Blast_Score=247, Evalue=1e-65, Organism=Caenorhabditis elegans, GI71999646, Length=356, Percent_Identity=36.7977528089888, Blast_Score=246, Evalue=2e-65, Organism=Caenorhabditis elegans, GI86570094, Length=352, Percent_Identity=39.4886363636364, Blast_Score=245, Evalue=4e-65, Organism=Caenorhabditis elegans, GI71982858, Length=347, Percent_Identity=37.1757925072046, Blast_Score=243, Evalue=2e-64, Organism=Caenorhabditis elegans, GI32565321, Length=377, Percent_Identity=37.6657824933687, Blast_Score=239, Evalue=3e-63, Organism=Caenorhabditis elegans, GI17510559, Length=448, Percent_Identity=33.9285714285714, Blast_Score=237, Evalue=1e-62, Organism=Caenorhabditis elegans, GI71995718, Length=378, Percent_Identity=38.6243386243386, Blast_Score=234, Evalue=9e-62, Organism=Caenorhabditis elegans, GI115532548, Length=375, Percent_Identity=37.6, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI115533224, Length=342, Percent_Identity=39.1812865497076, Blast_Score=233, Evalue=2e-61, Organism=Caenorhabditis elegans, GI115532546, Length=371, Percent_Identity=37.7358490566038, Blast_Score=232, Evalue=4e-61, Organism=Caenorhabditis elegans, GI17537549, Length=362, Percent_Identity=37.0165745856354, Blast_Score=226, Evalue=2e-59, Organism=Caenorhabditis elegans, GI17552642, Length=367, Percent_Identity=37.3297002724796, Blast_Score=224, Evalue=1e-58, Organism=Caenorhabditis elegans, GI17507945, Length=376, Percent_Identity=38.563829787234, Blast_Score=222, Evalue=4e-58, Organism=Caenorhabditis elegans, GI17507877, Length=369, Percent_Identity=37.940379403794, Blast_Score=215, Evalue=4e-56, Organism=Caenorhabditis elegans, GI17509811, Length=397, Percent_Identity=34.0050377833753, Blast_Score=214, Evalue=8e-56, Organism=Caenorhabditis elegans, GI17507879, Length=369, Percent_Identity=36.8563685636856, Blast_Score=211, Evalue=1e-54, Organism=Caenorhabditis elegans, GI17507881, Length=369, Percent_Identity=35.5013550135501, Blast_Score=206, Evalue=2e-53, Organism=Caenorhabditis elegans, GI17553716, Length=361, Percent_Identity=31.5789473684211, Blast_Score=194, Evalue=1e-49, Organism=Caenorhabditis elegans, GI193206561, Length=342, Percent_Identity=33.0409356725146, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI17505370, Length=354, Percent_Identity=33.6158192090396, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17536103, Length=392, Percent_Identity=31.6326530612245, Blast_Score=185, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17536101, Length=392, Percent_Identity=31.6326530612245, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17536099, Length=392, Percent_Identity=31.6326530612245, Blast_Score=183, Evalue=2e-46, Organism=Caenorhabditis elegans, GI193208216, Length=376, Percent_Identity=32.7127659574468, Blast_Score=176, Evalue=2e-44, Organism=Caenorhabditis elegans, GI71990816, Length=353, Percent_Identity=33.4277620396601, Blast_Score=167, Evalue=2e-41, Organism=Caenorhabditis elegans, GI17556951, Length=370, Percent_Identity=29.7297297297297, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17508543, Length=376, Percent_Identity=28.7234042553192, Blast_Score=159, Evalue=4e-39, Organism=Caenorhabditis elegans, GI25148203, Length=410, Percent_Identity=28.5365853658537, Blast_Score=158, Evalue=6e-39, Organism=Caenorhabditis elegans, GI17507641, Length=388, Percent_Identity=30.1546391752577, Blast_Score=155, Evalue=5e-38, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=30.1333333333333, Blast_Score=147, Evalue=2e-35, Organism=Caenorhabditis elegans, GI71982862, Length=204, Percent_Identity=36.7647058823529, Blast_Score=140, Evalue=2e-33, Organism=Caenorhabditis elegans, GI25148291, Length=360, Percent_Identity=26.1111111111111, Blast_Score=120, Evalue=2e-27, Organism=Caenorhabditis elegans, GI71997889, Length=369, Percent_Identity=29.2682926829268, Blast_Score=119, Evalue=4e-27, Organism=Caenorhabditis elegans, GI25148205, Length=334, Percent_Identity=27.2455089820359, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71987152, Length=92, Percent_Identity=42.3913043478261, Blast_Score=92, Evalue=8e-19, Organism=Saccharomyces cerevisiae, GI6320224, Length=367, Percent_Identity=38.6920980926431, Blast_Score=280, Evalue=4e-76, Organism=Saccharomyces cerevisiae, GI6324217, Length=353, Percent_Identity=42.7762039660057, Blast_Score=279, Evalue=9e-76, Organism=Saccharomyces cerevisiae, GI6321856, Length=362, Percent_Identity=41.7127071823204, Blast_Score=273, Evalue=4e-74, Organism=Saccharomyces cerevisiae, GI6322912, Length=362, Percent_Identity=40.6077348066298, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6322323, Length=362, Percent_Identity=40.6077348066298, Blast_Score=268, Evalue=2e-72, Organism=Saccharomyces cerevisiae, GI6324778, Length=363, Percent_Identity=42.1487603305785, Blast_Score=261, Evalue=2e-70, Organism=Saccharomyces cerevisiae, GI6325138, Length=364, Percent_Identity=39.2857142857143, Blast_Score=254, Evalue=3e-68, Organism=Saccharomyces cerevisiae, GI6321360, Length=359, Percent_Identity=42.3398328690808, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6320041, Length=344, Percent_Identity=38.3720930232558, Blast_Score=251, Evalue=2e-67, Organism=Saccharomyces cerevisiae, GI6324620, Length=352, Percent_Identity=37.5, Blast_Score=233, Evalue=8e-62, Organism=Saccharomyces cerevisiae, GI6323021, Length=352, Percent_Identity=38.6363636363636, Blast_Score=229, Evalue=6e-61, Organism=Saccharomyces cerevisiae, GI6320119, Length=351, Percent_Identity=35.042735042735, Blast_Score=229, Evalue=9e-61, Organism=Saccharomyces cerevisiae, GI6323947, Length=399, Percent_Identity=33.5839598997494, Blast_Score=202, Evalue=9e-53, Organism=Saccharomyces cerevisiae, GI6321963, Length=377, Percent_Identity=35.2785145888594, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6319714, Length=379, Percent_Identity=31.6622691292876, Blast_Score=198, Evalue=2e-51, Organism=Saccharomyces cerevisiae, GI6322427, Length=362, Percent_Identity=32.3204419889503, Blast_Score=196, Evalue=8e-51, Organism=Saccharomyces cerevisiae, GI6320449, Length=364, Percent_Identity=35.7142857142857, Blast_Score=194, Evalue=2e-50, Organism=Saccharomyces cerevisiae, GI6320400, Length=566, Percent_Identity=30.3886925795053, Blast_Score=190, Evalue=5e-49, Organism=Saccharomyces cerevisiae, GI6321267, Length=358, Percent_Identity=34.6368715083799, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6321111, Length=349, Percent_Identity=32.378223495702, Blast_Score=184, Evalue=3e-47, Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=30.3827751196172, Blast_Score=167, Evalue=4e-42, Organism=Saccharomyces cerevisiae, GI6323306, Length=318, Percent_Identity=33.0188679245283, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6320173, Length=223, Percent_Identity=33.1838565022422, Blast_Score=142, Evalue=2e-34, Organism=Saccharomyces cerevisiae, GI6324366, Length=352, Percent_Identity=26.9886363636364, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6321374, Length=400, Percent_Identity=26, Blast_Score=88, Evalue=3e-18, Organism=Saccharomyces cerevisiae, GI6322876, Length=208, Percent_Identity=29.3269230769231, Blast_Score=78, Evalue=4e-15, Organism=Saccharomyces cerevisiae, GI6323844, Length=337, Percent_Identity=23.1454005934718, Blast_Score=74, Evalue=5e-14, Organism=Drosophila melanogaster, GI24645031, Length=366, Percent_Identity=40.4371584699454, Blast_Score=288, Evalue=9e-78, Organism=Drosophila melanogaster, GI24582080, Length=356, Percent_Identity=39.8876404494382, Blast_Score=272, Evalue=4e-73, Organism=Drosophila melanogaster, GI24582078, Length=356, Percent_Identity=39.8876404494382, Blast_Score=272, Evalue=4e-73, Organism=Drosophila melanogaster, GI17136248, Length=356, Percent_Identity=39.8876404494382, Blast_Score=272, Evalue=4e-73, Organism=Drosophila melanogaster, GI24582075, Length=356, Percent_Identity=39.8876404494382, Blast_Score=272, Evalue=4e-73, Organism=Drosophila melanogaster, GI28574962, Length=382, Percent_Identity=38.4816753926702, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI24644483, Length=357, Percent_Identity=40.0560224089636, Blast_Score=261, Evalue=1e-69, Organism=Drosophila melanogaster, GI281361218, Length=357, Percent_Identity=40.0560224089636, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24644481, Length=357, Percent_Identity=40.0560224089636, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24644487, Length=357, Percent_Identity=40.0560224089636, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI45551833, Length=357, Percent_Identity=40.0560224089636, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24644485, Length=357, Percent_Identity=40.0560224089636, Blast_Score=260, Evalue=1e-69, Organism=Drosophila melanogaster, GI24644479, Length=357, Percent_Identity=40.0560224089636, Blast_Score=260, Evalue=2e-69, Organism=Drosophila melanogaster, GI24662330, Length=356, Percent_Identity=39.8876404494382, Blast_Score=258, Evalue=1e-68, Organism=Drosophila melanogaster, GI21356161, Length=415, Percent_Identity=37.1084337349398, Blast_Score=257, Evalue=1e-68, Organism=Drosophila melanogaster, GI24585582, Length=384, Percent_Identity=38.28125, Blast_Score=256, Evalue=3e-68, Organism=Drosophila melanogaster, GI24583279, Length=343, Percent_Identity=35.8600583090379, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI18857967, Length=360, Percent_Identity=38.6111111111111, Blast_Score=251, Evalue=9e-67, Organism=Drosophila melanogaster, GI24583281, Length=343, Percent_Identity=35.8600583090379, Blast_Score=251, Evalue=1e-66, Organism=Drosophila melanogaster, GI21355075, Length=349, Percent_Identity=39.541547277937, Blast_Score=249, Evalue=5e-66, Organism=Drosophila melanogaster, GI17985987, Length=382, Percent_Identity=39.2670157068063, Blast_Score=245, Evalue=5e-65, Organism=Drosophila melanogaster, GI24642151, Length=362, Percent_Identity=36.7403314917127, Blast_Score=244, Evalue=1e-64, Organism=Drosophila melanogaster, GI24584399, Length=348, Percent_Identity=39.6551724137931, Blast_Score=243, Evalue=2e-64, Organism=Drosophila melanogaster, GI24581954, Length=348, Percent_Identity=39.9425287356322, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI24581952, Length=348, Percent_Identity=39.9425287356322, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI24581956, Length=348, Percent_Identity=39.9425287356322, Blast_Score=241, Evalue=6e-64, Organism=Drosophila melanogaster, GI24584994, Length=405, Percent_Identity=36.2962962962963, Blast_Score=237, Evalue=1e-62, Organism=Drosophila melanogaster, GI17977678, Length=370, Percent_Identity=38.3783783783784, Blast_Score=232, Evalue=4e-61, Organism=Drosophila melanogaster, GI28575014, Length=363, Percent_Identity=33.8842975206612, Blast_Score=229, Evalue=5e-60, Organism=Drosophila melanogaster, GI17136814, Length=361, Percent_Identity=36.5650969529086, Blast_Score=218, Evalue=8e-57, Organism=Drosophila melanogaster, GI281365720, Length=313, Percent_Identity=38.0191693290735, Blast_Score=213, Evalue=2e-55, Organism=Drosophila melanogaster, GI28571808, Length=355, Percent_Identity=33.5211267605634, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI28571809, Length=355, Percent_Identity=33.5211267605634, Blast_Score=189, Evalue=3e-48, Organism=Drosophila melanogaster, GI17647335, Length=359, Percent_Identity=32.8690807799443, Blast_Score=185, Evalue=8e-47, Organism=Drosophila melanogaster, GI24643725, Length=384, Percent_Identity=31.25, Blast_Score=183, Evalue=2e-46, Organism=Drosophila melanogaster, GI24642822, Length=375, Percent_Identity=31.2, Blast_Score=181, Evalue=2e-45, Organism=Drosophila melanogaster, GI21355559, Length=368, Percent_Identity=33.4239130434783, Blast_Score=172, Evalue=5e-43, Organism=Drosophila melanogaster, GI24666101, Length=355, Percent_Identity=31.5492957746479, Blast_Score=171, Evalue=1e-42, Organism=Drosophila melanogaster, GI24668515, Length=330, Percent_Identity=32.4242424242424, Blast_Score=145, Evalue=6e-35, Organism=Drosophila melanogaster, GI20130173, Length=343, Percent_Identity=28.8629737609329, Blast_Score=145, Evalue=9e-35, Organism=Drosophila melanogaster, GI19920478, Length=358, Percent_Identity=29.8882681564246, Blast_Score=141, Evalue=9e-34, Organism=Drosophila melanogaster, GI17136666, Length=406, Percent_Identity=26.8472906403941, Blast_Score=129, Evalue=5e-30, Organism=Drosophila melanogaster, GI24640164, Length=349, Percent_Identity=28.6532951289398, Blast_Score=127, Evalue=2e-29, Organism=Drosophila melanogaster, GI18859659, Length=221, Percent_Identity=33.4841628959276, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI28571338, Length=221, Percent_Identity=33.4841628959276, Blast_Score=110, Evalue=2e-24, Organism=Drosophila melanogaster, GI24646066, Length=344, Percent_Identity=21.5116279069767, Blast_Score=69, Evalue=7e-12,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR000629 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 58026; Mature: 58026
Theoretical pI: Translated: 10.01; Mature: 10.01
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFTELGLDEDILKAVLDNGYDEPTPIQAETIPGVLEGKDIIGQAQTGTGKTAAFGLPIL CCCHHCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHCCCCCCCCCCCEEECCCHH QNVDLDNPNIQAIIISPTRELAAQTQAEIFKLGKYKKAKVQVVYGGSDIRRQINALKSHP CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCC QIVVGTPGRLLDHIGRKTIRLDHVKTLVLDEADDMLDMGFLPDIEHIIEQTPSERQTLLF EEEEECCHHHHHHCCCCEEEHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCCCCCHHEEEE SATMPAPIKKIGVKFMTDPKQITVKSKELTADLVDQYYVRSKEFEKFDILTRVLDVQAPK ECCCCCCHHHHCCEEECCCHHEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCE LAVIFGRTKRRVDEVSKGLVTRGYNAAGIHGDLTQQRRMSILRQFREGQLDILVATDVAA EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHH RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGATGTSVTFVTNWEMDYLRDVEHLTKK CCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH RLLPMKPPTEEEAFAGRAAMAEQSIEELVQKTDVAKFEEQVDHLLEQHDAKTLVAALLNE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTKSDASEIKVKITPERPLPRKKGGNKGGKGGGGYRGGNHRGGNGRRSNGNSSNGGGRGG HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KWNNDRKGGGKSRFGRDDRNHNGGKRNDRNSGNKGGSNRQFVIKEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure MKFTELGLDEDILKAVLDNGYDEPTPIQAETIPGVLEGKDIIGQAQTGTGKTAAFGLPIL CCCHHCCCCHHHHHHHHHCCCCCCCCCCHHCCCCCCCCCHHCCCCCCCCCCCEEECCCHH QNVDLDNPNIQAIIISPTRELAAQTQAEIFKLGKYKKAKVQVVYGGSDIRRQINALKSHP CCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHCCCCEEEEEEEECCHHHHHHHHHHHCCC QIVVGTPGRLLDHIGRKTIRLDHVKTLVLDEADDMLDMGFLPDIEHIIEQTPSERQTLLF EEEEECCHHHHHHCCCCEEEHHHHHHHHHCCCHHHHHCCCCCCHHHHHHCCCCCHHEEEE SATMPAPIKKIGVKFMTDPKQITVKSKELTADLVDQYYVRSKEFEKFDILTRVLDVQAPK ECCCCCCHHHHCCEEECCCHHEEEEHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCE LAVIFGRTKRRVDEVSKGLVTRGYNAAGIHGDLTQQRRMSILRQFREGQLDILVATDVAA EEEEECCHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHCCCEEEEEEECHHH RGLDISGVTHVYNYDIPQDPESYVHRIGRTGRAGATGTSVTFVTNWEMDYLRDVEHLTKK CCCCCCCCEEEEECCCCCCHHHHHHHHCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHH RLLPMKPPTEEEAFAGRAAMAEQSIEELVQKTDVAKFEEQVDHLLEQHDAKTLVAALLNE CCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VTKSDASEIKVKITPERPLPRKKGGNKGGKGGGGYRGGNHRGGNGRRSNGNSSNGGGRGG HHCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC KWNNDRKGGGKSRFGRDDRNHNGGKRNDRNSGNKGGSNRQFVIKEK CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA