The gene/protein map for NC_008525 is currently unavailable.
Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is 116493187

Identifier: 116493187

GI number: 116493187

Start: 1423095

End: 1423508

Strand: Reverse

Name: 116493187

Synonym: PEPE_1449

Alternate gene names: NA

Gene position: 1423508-1423095 (Counterclockwise)

Preceding gene: 116493188

Following gene: 116493186

Centisome position: 77.69

GC content: 40.1

Gene sequence:

>414_bases
ATGACACAAGAAAATGAATTTGAAGACGTAGAAATGACGTTAGGCGAACCAGAATTTAATGCGATGTTGATGCAAATGAC
GCATGAGGTAAACGCTAGCAATGCGTCAGAATATAACTTTATGGGTAATACAACCCAAGAAGTTGGGGAAAATGTATGGG
CAGTTCCAGCTTATTTAAGTGACGAATATGCGCTATTCTTTCTATATACAGAAATTGATACCGGCGATTGGGTCCTAGCC
TTTTCCGAAGCAGATTTAGGTGAAGGGCAGTTTAATCTAGGAACTCCAATGACAACGGGTGAAGGCTTAAACAAATTATT
CGAACAAGATCCCGATCGTGCCAAAATGGTATTGAGTTTTGTTAATGATATGGAAAAAGCTGGCGAAGGTATGTGGCGCA
TGGTGGAACAATAA

Upstream 100 bases:

>100_bases
TATTGATGAAAAGGTTAGTTTTACAGCAGAATTACCAGATGATTTAAAGCAAATCGGGATGGAAGAGTAGCATAATTGCA
GTTTCAGATAGGAGAACAAA

Downstream 100 bases:

>100_bases
AATTTTACATTTAAAAAGAGCGGACTATGGGGAGCGAATTAACGTAAGTTTCTTCTAAGAAGCTCTTTTTTTGTACCAAC
TTTTTGAATATATTTTTATG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MTQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLSDEYALFFLYTEIDTGDWVLA
FSEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSFVNDMEKAGEGMWRMVEQ

Sequences:

>Translated_137_residues
MTQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLSDEYALFFLYTEIDTGDWVLA
FSEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSFVNDMEKAGEGMWRMVEQ
>Mature_136_residues
TQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLSDEYALFFLYTEIDTGDWVLAF
SEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSFVNDMEKAGEGMWRMVEQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15538; Mature: 15407

Theoretical pI: Translated: 3.54; Mature: 3.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
8.0 %Met     (Translated Protein)
8.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
7.4 %Met     (Mature Protein)
7.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLS
CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEECEEEEC
DEYALFFLYTEIDTGDWVLAFSEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSF
CCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
VNDMEKAGEGMWRMVEQ
HHHHHHHCCHHHHHHCC
>Mature Secondary Structure 
TQENEFEDVEMTLGEPEFNAMLMQMTHEVNASNASEYNFMGNTTQEVGENVWAVPAYLS
CCCCCCCCEEEECCCCCHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHCCCEEECEEEEC
DEYALFFLYTEIDTGDWVLAFSEADLGEGQFNLGTPMTTGEGLNKLFEQDPDRAKMVLSF
CCEEEEEEEEEECCCCEEEEECCCCCCCCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHH
VNDMEKAGEGMWRMVEQ
HHHHHHHCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA