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The map label for this gene is secY [H]

Identifier: 116493143

GI number: 116493143

Start: 1382682

End: 1383980

Strand: Reverse

Name: secY [H]

Synonym: PEPE_1398

Alternate gene names: 116493143

Gene position: 1383980-1382682 (Counterclockwise)

Preceding gene: 116493144

Following gene: 116493142

Centisome position: 75.53

GC content: 36.72

Gene sequence:

>1299_bases
ATGCTGACGACTGTCAAAAATGCTTTAAAAGTGAAGGATATTAGAAATAAGATTCTGTTCACACTCGGTATTTTGATTGT
ATTTCGTTTAGGATCATATATCACTGTTCCTGGTGTTAATGCGAAAGCATTGGAAAGCATGTCTTCATCAGGATTAGTTG
GAATTTTGAATACGTTCAGTGGTGGTGGATTAACGAATTACTCCATTTTCGCAATGGGGGTTTCGCCATATATCACAGCA
CAAATTATTGTACAATTGCTACAAATGGATATCGTTCCTAAATTTGTGGAATGGAGTAAGCAAGGTGAGGTTGGTCGTCG
AAAGCTTAATCAAGCTACGAGATGGTTAACAATCGTCCTTGCTTTTGCTCAATCAATCGGAATTACAGCTGGTTTTAATT
ATTTAAGTCAGATGAATTTGGTTGAATCACCAAGTGTCCAAACCTTTCTAACGATTGGTTTAATTCTTACGGCCGGAACT
ATGTTAACTACCTGGTTAGGTGACATGATTACGGAACGTGGGATTGGACAAGGAGTATCAATGATTATCTTTGCAGGTAT
CATTGCTCGTACACCAGTTGGGATTCAGCAAATTTACACTGAGCAGTTTGTTAATACTGCGAAAAGCGAATGGACGCAAA
GTTTTATTATTGTTGGAGCAATTATCCTTGCAGTTTTAGCCATTGTAATTTTTGTTACATGGGTACAACAAGCAAGTCGT
AAAATTCCAATTCAATATACAAGAAGAGCTTCTGGCGCTTCTGATAGTAGTTATTTACCTCTTAAGGTTAACGTAGCTGG
TGTTATTCCAGTTATCTTTGCTAGTTCTTTTATTTCTACACCGCAAACCATTTTAATGGCTTTTGCATCATCACATTCTG
ATGATACTTGGTACACTGTTTTAAACGATGTATTCAATATGCAAACCACTAAAGGTGCCATCTTATATACTGTGTTAATT
GTATTGTTTACGTTCTTCTATGCTTTTGTTCAGGTTAACCCTGAAAAACTAGCTGAAAATTTACAAAAACAAGGCAGTTA
TATTCCAGGAGTTTGGCCGGGAAAGAAAACCCAAGATTATATGTCAGGTCTTTTAATTAGACTTAGTGTAGTTGGGGCAT
TATTCCTTGGCTTGGTTGCCTTAATTCCATTGCTTGCTTCAAACATTTTTGGTTTGGACGAATCAATTGGTTTAGGTGGA
ACAAGTCTTTTGATTGTTGTTGGTGTAGCAATCGAGTTGGCAAATCAACTTGAAGGGTTAATGATGAAACGAGAATACGT
TGGATTCATTCGAAAATAA

Upstream 100 bases:

>100_bases
ATGGAGAAATTACTAAGAAGCTTACTGTTAAAGCTAACAAATTCTCTGAAAGTGCTGTAAAAGCAATCGAAGCTGCTGGT
GGTAAAACCGAGGTGATTTA

Downstream 100 bases:

>100_bases
TTCGTTAGTTTAACAATGAAGGAGAATTTCAAATGAGTAAATTAAACCTCGTTTTGATGGGTCTTCCAGGTGCTGGTAAA
GGTACACAGGCTCAGAGAAT

Product: preprotein translocase subunit SecY

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 432; Mature: 432

Protein sequence:

>432_residues
MLTTVKNALKVKDIRNKILFTLGILIVFRLGSYITVPGVNAKALESMSSSGLVGILNTFSGGGLTNYSIFAMGVSPYITA
QIIVQLLQMDIVPKFVEWSKQGEVGRRKLNQATRWLTIVLAFAQSIGITAGFNYLSQMNLVESPSVQTFLTIGLILTAGT
MLTTWLGDMITERGIGQGVSMIIFAGIIARTPVGIQQIYTEQFVNTAKSEWTQSFIIVGAIILAVLAIVIFVTWVQQASR
KIPIQYTRRASGASDSSYLPLKVNVAGVIPVIFASSFISTPQTILMAFASSHSDDTWYTVLNDVFNMQTTKGAILYTVLI
VLFTFFYAFVQVNPEKLAENLQKQGSYIPGVWPGKKTQDYMSGLLIRLSVVGALFLGLVALIPLLASNIFGLDESIGLGG
TSLLIVVGVAIELANQLEGLMMKREYVGFIRK

Sequences:

>Translated_432_residues
MLTTVKNALKVKDIRNKILFTLGILIVFRLGSYITVPGVNAKALESMSSSGLVGILNTFSGGGLTNYSIFAMGVSPYITA
QIIVQLLQMDIVPKFVEWSKQGEVGRRKLNQATRWLTIVLAFAQSIGITAGFNYLSQMNLVESPSVQTFLTIGLILTAGT
MLTTWLGDMITERGIGQGVSMIIFAGIIARTPVGIQQIYTEQFVNTAKSEWTQSFIIVGAIILAVLAIVIFVTWVQQASR
KIPIQYTRRASGASDSSYLPLKVNVAGVIPVIFASSFISTPQTILMAFASSHSDDTWYTVLNDVFNMQTTKGAILYTVLI
VLFTFFYAFVQVNPEKLAENLQKQGSYIPGVWPGKKTQDYMSGLLIRLSVVGALFLGLVALIPLLASNIFGLDESIGLGG
TSLLIVVGVAIELANQLEGLMMKREYVGFIRK
>Mature_432_residues
MLTTVKNALKVKDIRNKILFTLGILIVFRLGSYITVPGVNAKALESMSSSGLVGILNTFSGGGLTNYSIFAMGVSPYITA
QIIVQLLQMDIVPKFVEWSKQGEVGRRKLNQATRWLTIVLAFAQSIGITAGFNYLSQMNLVESPSVQTFLTIGLILTAGT
MLTTWLGDMITERGIGQGVSMIIFAGIIARTPVGIQQIYTEQFVNTAKSEWTQSFIIVGAIILAVLAIVIFVTWVQQASR
KIPIQYTRRASGASDSSYLPLKVNVAGVIPVIFASSFISTPQTILMAFASSHSDDTWYTVLNDVFNMQTTKGAILYTVLI
VLFTFFYAFVQVNPEKLAENLQKQGSYIPGVWPGKKTQDYMSGLLIRLSVVGALFLGLVALIPLLASNIFGLDESIGLGG
TSLLIVVGVAIELANQLEGLMMKREYVGFIRK

Specific function: Involved in protein export. Interacts with secA and secE to allow the translocation of proteins across the plasma membrane, by forming part of a channel [H]

COG id: COG0201

COG function: function code U; Preprotein translocase subunit SecY

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the secY/SEC61-alpha family [H]

Homologues:

Organism=Escherichia coli, GI1789696, Length=428, Percent_Identity=39.2523364485981, Blast_Score=256, Evalue=2e-69,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002208
- InterPro:   IPR023201 [H]

Pfam domain/function: PF00344 SecY [H]

EC number: NA

Molecular weight: Translated: 47055; Mature: 47055

Theoretical pI: Translated: 9.98; Mature: 9.98

Prosite motif: PS00755 SECY_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLTTVKNALKVKDIRNKILFTLGILIVFRLGSYITVPGVNAKALESMSSSGLVGILNTFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCCEEEHHCCC
GGGLTNYSIFAMGVSPYITAQIIVQLLQMDIVPKFVEWSKQGEVGRRKLNQATRWLTIVL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AFAQSIGITAGFNYLSQMNLVESPSVQTFLTIGLILTAGTMLTTWLGDMITERGIGQGVS
HHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
MIIFAGIIARTPVGIQQIYTEQFVNTAKSEWTQSFIIVGAIILAVLAIVIFVTWVQQASR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIPIQYTRRASGASDSSYLPLKVNVAGVIPVIFASSFISTPQTILMAFASSHSDDTWYTV
CCCCHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHH
LNDVFNMQTTKGAILYTVLIVLFTFFYAFVQVNPEKLAENLQKQGSYIPGVWPGKKTQDY
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
MSGLLIRLSVVGALFLGLVALIPLLASNIFGLDESIGLGGTSLLIVVGVAIELANQLEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MMKREYVGFIRK
HHHHHHHHHHCC
>Mature Secondary Structure
MLTTVKNALKVKDIRNKILFTLGILIVFRLGSYITVPGVNAKALESMSSSGLVGILNTFS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCCHHHHHHHCCCCCEEEHHCCC
GGGLTNYSIFAMGVSPYITAQIIVQLLQMDIVPKFVEWSKQGEVGRRKLNQATRWLTIVL
CCCCCCCEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHH
AFAQSIGITAGFNYLSQMNLVESPSVQTFLTIGLILTAGTMLTTWLGDMITERGIGQGVS
HHHHHHCCHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHH
MIIFAGIIARTPVGIQQIYTEQFVNTAKSEWTQSFIIVGAIILAVLAIVIFVTWVQQASR
HHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
KIPIQYTRRASGASDSSYLPLKVNVAGVIPVIFASSFISTPQTILMAFASSHSDDTWYTV
CCCCHHHCCCCCCCCCCEEEEEEEHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCHHHHH
LNDVFNMQTTKGAILYTVLIVLFTFFYAFVQVNPEKLAENLQKQGSYIPGVWPGKKTQDY
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCCCCCCCCHHHH
MSGLLIRLSVVGALFLGLVALIPLLASNIFGLDESIGLGGTSLLIVVGVAIELANQLEGL
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
MMKREYVGFIRK
HHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11337471 [H]