Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116493081

Identifier: 116493081

GI number: 116493081

Start: 1322566

End: 1323270

Strand: Direct

Name: 116493081

Synonym: PEPE_1333

Alternate gene names: NA

Gene position: 1322566-1323270 (Clockwise)

Preceding gene: 116493080

Following gene: 116493087

Centisome position: 72.18

GC content: 36.45

Gene sequence:

>705_bases
ATGAAATACAATCTAAACGTGGCTCATCTTTATGGTGACCTATTGAATACCTATGGTGACAACGGTAATTTACTAGCTTT
AAAATATTATGCTAAAAAAATGGATACAGATTTAGATATTGACATTGTTAGTCTCGATGATCAATTTAATCCTAAAGACT
GGGATATCGTCTTTTTCGGCGGTGGTCAAGACTATGAACAAACCATCGTTTCCAAGGATATTCAACACAAAAAAGAAGGT
CTAACTGATTATATTGAAGATGGCGGTCCACTACTTGCCATCTGCGGTGGTTATCAACTTCTAGGTCATTACTACGTTGG
TGCGAATGGTGAGAAAATTAAAGGGATTGATGCTTTAGATCACTACACCTTAAGTCAAGACGATAATCGCTTCATTGGCG
ATATTGTTATCAAAAATGCTGAAACTGGAGAAATTTACCATGGTTTTGAAAATCACAACGGGAAAACTTTCCTTGGTAAG
GGAGAACGTCCTTTAGGAGAAGTTCAGTCTGGCCATGGTAACAACGGTGAAGATCAATCAGAAGGAGTCATTTATAAAAA
CGTTTATGGCTCTTATTTCCATGGTCCAATCCTAACTCGTAATGGTGAATTAGCTAAGCGTATAATTTTAACTGCTCTTA
GTCGTAAATATCCTGATGCTGATTTAACTCCTCAAAAAGAACTTACTATTGAACCAACTTTCTAA

Upstream 100 bases:

>100_bases
TTACCTACCAAGCGTGTTTACGTATTTGCAACTTACACTGCCATGCTTCAATTACGTAAACAATTAGCTACAGAAGGTTA
CATCAAAGAGGGGATTTAAT

Downstream 100 bases:

>100_bases
GACTAAAAAGAGTATCTAAGAAAGAATTTTTTCTTAGATACTCTTTTTTATGCTTCACCAGGTTCACTAACAATTAATTC
AAGTTTTCCACTATAGCTCC

Product: glutamine amidotransferase

Products: NA

Alternate protein names: Cobyric Acid Synthase; CobB/CobQ Domain Protein Glutamine Amidotransferase; Cobyric Acid Synthase CobQ; CobB/CobQ-Like Glutamine Amidotransferase; Adenosylcobyric Acid Synthase; CobB/CobQ-Like Glutamine Amidotransferase Domain Protein; Glutamine Amidotransferase CobB/CobQ Family; Amidotransferase; CobB/CobQ-Like Protein; Cobb/Cobq Domain Protein Glutamine Amidotransferase; Cobyric Acid; Cobyric Acid Synthase Glutamine Amidotransferase; Glutamine Amidotransferase-Like Protein; Glutamine Amidotransferase Domain Protein; Cobyric Acid Synthase Cobq; CobB/CobQ Family Glutamine Amidotransferase; Cobyric Acid Synthase Like; Glutamine Amidotransferase Domain-Containing Protein

Number of amino acids: Translated: 234; Mature: 234

Protein sequence:

>234_residues
MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFGGGQDYEQTIVSKDIQHKKEG
LTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALDHYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGK
GERPLGEVQSGHGNNGEDQSEGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF

Sequences:

>Translated_234_residues
MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFGGGQDYEQTIVSKDIQHKKEG
LTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALDHYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGK
GERPLGEVQSGHGNNGEDQSEGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF
>Mature_234_residues
MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFGGGQDYEQTIVSKDIQHKKEG
LTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALDHYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGK
GERPLGEVQSGHGNNGEDQSEGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF

Specific function: Unknown

COG id: COG3442

COG function: function code R; Predicted glutamine amidotransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26132; Mature: 26132

Theoretical pI: Translated: 4.68; Mature: 4.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFG
CEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCEEEEEECCCCCCCCEEEEEEC
GGQDYEQTIVSKDIQHKKEGLTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALD
CCCCHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCEEEEEEEEECCCCCEECCCCHHH
HYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGKGERPLGEVQSGHGNNGEDQS
CEECCCCCCEEEEEEEEECCCCCCEEECEECCCCCEEECCCCCCCHHHHCCCCCCCCCCC
EGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF
CCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
>Mature Secondary Structure
MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFG
CEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCEEEEEECCCCCCCCEEEEEEC
GGQDYEQTIVSKDIQHKKEGLTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALD
CCCCHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCEEEEEEEEECCCCCEECCCCHHH
HYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGKGERPLGEVQSGHGNNGEDQS
CEECCCCCCEEEEEEEEECCCCCCEEECEECCCCCEEECCCCCCCHHHHCCCCCCCCCCC
EGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF
CCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA