| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116493081
Identifier: 116493081
GI number: 116493081
Start: 1322566
End: 1323270
Strand: Direct
Name: 116493081
Synonym: PEPE_1333
Alternate gene names: NA
Gene position: 1322566-1323270 (Clockwise)
Preceding gene: 116493080
Following gene: 116493087
Centisome position: 72.18
GC content: 36.45
Gene sequence:
>705_bases ATGAAATACAATCTAAACGTGGCTCATCTTTATGGTGACCTATTGAATACCTATGGTGACAACGGTAATTTACTAGCTTT AAAATATTATGCTAAAAAAATGGATACAGATTTAGATATTGACATTGTTAGTCTCGATGATCAATTTAATCCTAAAGACT GGGATATCGTCTTTTTCGGCGGTGGTCAAGACTATGAACAAACCATCGTTTCCAAGGATATTCAACACAAAAAAGAAGGT CTAACTGATTATATTGAAGATGGCGGTCCACTACTTGCCATCTGCGGTGGTTATCAACTTCTAGGTCATTACTACGTTGG TGCGAATGGTGAGAAAATTAAAGGGATTGATGCTTTAGATCACTACACCTTAAGTCAAGACGATAATCGCTTCATTGGCG ATATTGTTATCAAAAATGCTGAAACTGGAGAAATTTACCATGGTTTTGAAAATCACAACGGGAAAACTTTCCTTGGTAAG GGAGAACGTCCTTTAGGAGAAGTTCAGTCTGGCCATGGTAACAACGGTGAAGATCAATCAGAAGGAGTCATTTATAAAAA CGTTTATGGCTCTTATTTCCATGGTCCAATCCTAACTCGTAATGGTGAATTAGCTAAGCGTATAATTTTAACTGCTCTTA GTCGTAAATATCCTGATGCTGATTTAACTCCTCAAAAAGAACTTACTATTGAACCAACTTTCTAA
Upstream 100 bases:
>100_bases TTACCTACCAAGCGTGTTTACGTATTTGCAACTTACACTGCCATGCTTCAATTACGTAAACAATTAGCTACAGAAGGTTA CATCAAAGAGGGGATTTAAT
Downstream 100 bases:
>100_bases GACTAAAAAGAGTATCTAAGAAAGAATTTTTTCTTAGATACTCTTTTTTATGCTTCACCAGGTTCACTAACAATTAATTC AAGTTTTCCACTATAGCTCC
Product: glutamine amidotransferase
Products: NA
Alternate protein names: Cobyric Acid Synthase; CobB/CobQ Domain Protein Glutamine Amidotransferase; Cobyric Acid Synthase CobQ; CobB/CobQ-Like Glutamine Amidotransferase; Adenosylcobyric Acid Synthase; CobB/CobQ-Like Glutamine Amidotransferase Domain Protein; Glutamine Amidotransferase CobB/CobQ Family; Amidotransferase; CobB/CobQ-Like Protein; Cobb/Cobq Domain Protein Glutamine Amidotransferase; Cobyric Acid; Cobyric Acid Synthase Glutamine Amidotransferase; Glutamine Amidotransferase-Like Protein; Glutamine Amidotransferase Domain Protein; Cobyric Acid Synthase Cobq; CobB/CobQ Family Glutamine Amidotransferase; Cobyric Acid Synthase Like; Glutamine Amidotransferase Domain-Containing Protein
Number of amino acids: Translated: 234; Mature: 234
Protein sequence:
>234_residues MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFGGGQDYEQTIVSKDIQHKKEG LTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALDHYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGK GERPLGEVQSGHGNNGEDQSEGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF
Sequences:
>Translated_234_residues MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFGGGQDYEQTIVSKDIQHKKEG LTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALDHYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGK GERPLGEVQSGHGNNGEDQSEGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF >Mature_234_residues MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFGGGQDYEQTIVSKDIQHKKEG LTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALDHYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGK GERPLGEVQSGHGNNGEDQSEGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF
Specific function: Unknown
COG id: COG3442
COG function: function code R; Predicted glutamine amidotransferase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26132; Mature: 26132
Theoretical pI: Translated: 4.68; Mature: 4.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.9 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 1.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFG CEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCEEEEEECCCCCCCCEEEEEEC GGQDYEQTIVSKDIQHKKEGLTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALD CCCCHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCEEEEEEEEECCCCCEECCCCHHH HYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGKGERPLGEVQSGHGNNGEDQS CEECCCCCCEEEEEEEEECCCCCCEEECEECCCCCEEECCCCCCCHHHHCCCCCCCCCCC EGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF CCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC >Mature Secondary Structure MKYNLNVAHLYGDLLNTYGDNGNLLALKYYAKKMDTDLDIDIVSLDDQFNPKDWDIVFFG CEECCCHHHHHHHHHHHCCCCCCEEEEEEEHHHCCCCCCEEEEEECCCCCCCCEEEEEEC GGQDYEQTIVSKDIQHKKEGLTDYIEDGGPLLAICGGYQLLGHYYVGANGEKIKGIDALD CCCCHHHHHHHHHHHHHHHCHHHHHHCCCCEEEEECCEEEEEEEEECCCCCEECCCCHHH HYTLSQDDNRFIGDIVIKNAETGEIYHGFENHNGKTFLGKGERPLGEVQSGHGNNGEDQS CEECCCCCCEEEEEEEEECCCCCCEEECEECCCCCEEECCCCCCCHHHHCCCCCCCCCCC EGVIYKNVYGSYFHGPILTRNGELAKRIILTALSRKYPDADLTPQKELTIEPTF CCEEEEECCCCCCCCCEEECCCHHHHHHHHHHHHHCCCCCCCCCCCCEEEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA