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The map label for this gene is farR [C]

Identifier: 116493056

GI number: 116493056

Start: 1299886

End: 1300257

Strand: Reverse

Name: farR [C]

Synonym: PEPE_1308

Alternate gene names: 116493056

Gene position: 1300257-1299886 (Counterclockwise)

Preceding gene: 116493057

Following gene: 116493055

Centisome position: 70.96

GC content: 35.48

Gene sequence:

>372_bases
ATGCAATTTAATTTTAATAGCAGCGAACCAATCTATCTCCAAGTCGCCCAACAGATTGAAGATGCAATCTTTACCGGCGG
TTTTAAAGAGGGAGAACAGATCCCTTCCACTACTGAAATATCAAAAGAATTTCACATAAATCCTGCAACAGTTTTAAAAG
GAATGAATCAACTGGTTTCACGAAAGCTTTTAGAAAAACATCGTGGAGTAGGGATGTTCGTGGCTGAGGGGGCAAGTAAT
CAAATTACTTTGAATCGCCAGCAAAATTTCTATAATAAGTATGTAATAGGGGTAGTTAAGGAAGCAGTTCGCCTTAATAT
TAATGAGGAAGATTTAAAAAAATTAATTGAACAGGGGTATAAATCTATATGA

Upstream 100 bases:

>100_bases
TGTCAATTTAATTGACTTTTTGCACGATAACCCATATAGTTAGTTACATGACTAATTAAGTTTATAATGAAGGAATTAAT
AAAATTTGAAGGTGGATGTT

Downstream 100 bases:

>100_bases
AGGGGATCGAAGTAAAGCAGGTAACCAAGTCATTCGATAAAAAAATGATTTTAAATGGAATTGGGATGACAATTGAGCCT
AATAAAATTTATGGTTTGTT

Product: GntR family transcriptional regulator

Products: NA

Alternate protein names: Transcriptional Regulator GntR Family; Transcriptional Regulator; Regulatory Protein GntR HTH; Transcription Regulator; Transcriptional Regulator Gntr Family; Transcriptional Regulator GntR Family Protein; Transcriptional Regulatory Protein

Number of amino acids: Translated: 123; Mature: 123

Protein sequence:

>123_residues
MQFNFNSSEPIYLQVAQQIEDAIFTGGFKEGEQIPSTTEISKEFHINPATVLKGMNQLVSRKLLEKHRGVGMFVAEGASN
QITLNRQQNFYNKYVIGVVKEAVRLNINEEDLKKLIEQGYKSI

Sequences:

>Translated_123_residues
MQFNFNSSEPIYLQVAQQIEDAIFTGGFKEGEQIPSTTEISKEFHINPATVLKGMNQLVSRKLLEKHRGVGMFVAEGASN
QITLNRQQNFYNKYVIGVVKEAVRLNINEEDLKKLIEQGYKSI
>Mature_123_residues
MQFNFNSSEPIYLQVAQQIEDAIFTGGFKEGEQIPSTTEISKEFHINPATVLKGMNQLVSRKLLEKHRGVGMFVAEGASN
QITLNRQQNFYNKYVIGVVKEAVRLNINEEDLKKLIEQGYKSI

Specific function: Possible Transcriptional Regulator Of The Succinyl-CoA- Synthetase Operon. Binds Specifically To The Farr Promoter And Exhibits Weak Binding To The Citrate Synthase And Lipoamide Dehydrogenase Promoters. Binding At The Farr Promoter Is Abolished By Long-

COG id: COG1725

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13979; Mature: 13979

Theoretical pI: Translated: 7.67; Mature: 7.67

Prosite motif: PS50949 HTH_GNTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQFNFNSSEPIYLQVAQQIEDAIFTGGFKEGEQIPSTTEISKEFHINPATVLKGMNQLVS
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
RKLLEKHRGVGMFVAEGASNQITLNRQQNFYNKYVIGVVKEAVRLNINEEDLKKLIEQGY
HHHHHHHCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KSI
CCC
>Mature Secondary Structure
MQFNFNSSEPIYLQVAQQIEDAIFTGGFKEGEQIPSTTEISKEFHINPATVLKGMNQLVS
CCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHH
RKLLEKHRGVGMFVAEGASNQITLNRQQNFYNKYVIGVVKEAVRLNINEEDLKKLIEQGY
HHHHHHHCCCEEEEECCCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH
KSI
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA