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The map label for this gene is yhcG [H]

Identifier: 116493055

GI number: 116493055

Start: 1299023

End: 1299889

Strand: Reverse

Name: yhcG [H]

Synonym: PEPE_1307

Alternate gene names: 116493055

Gene position: 1299889-1299023 (Counterclockwise)

Preceding gene: 116493056

Following gene: 116493054

Centisome position: 70.94

GC content: 34.83

Gene sequence:

>867_bases
ATGAAGGGGATCGAAGTAAAGCAGGTAACCAAGTCATTCGATAAAAAAATGATTTTAAATGGAATTGGGATGACAATTGA
GCCTAATAAAATTTATGGTTTGTTAGGTCGAAATGGGGCTGGAAAAAGTACTTTACTAAGCTTATTAGTAAACCGAATTG
CTCCGGATACGGGAGAAATTCGGTTAGATAATAAAGTTATTCGTGATAATGATGAACAACTCTCTAAGATGTTTTTGATG
AGTGAAGTGGATCTTTATCCTAAAAACCTTAAAGTTAAGGATGTTTTCAAGTGGACCAAGAGCTTTTACGGGGGCTTTGA
TGAAGAACTCGCACAAGATTTATGTGAGAAGTTTGGATTACAAACTAATATTATTTTTAATAAGTTATCAACCGGTTACC
GTACTATTATGAAGTTAATCGTTGCATTGGCGGTTCCGGTGGAATATGTTTTCTTAGATGAACCTATTCTAGGTTTAGAT
GCCGGTCATCGAGAAATTTTCTATAATGCCTTAGTTGAGACATATGCGGAAAATCCTCGTACTTTTGTTATTTCAACCCA
TCTAATTGAAGAGATTGCTAATTTAATTGAGCATGTCTTAGTAATCGATCATGGTCGTTTAATTGTGGATGATGAAACCG
AAAAAGTGCTAGGTGAAGCTTACGTAGTTAGCGGACCTGAGGACAAGGTGGATGAATATACCCAAGGATTGAACGTTATT
GGGAGCGATAAATTGGCTCGAATCAAAGCTAGTTATGTTTTTGGTTCATTAGATAATAAACCAATTTCGGACTTAATTAA
CATTGATCAAATGGATTTACAAACCTTATTTGTCAATTTAACAAATGGAGGTAATGAGAATGAATAA

Upstream 100 bases:

>100_bases
TCTATAATAAGTATGTAATAGGGGTAGTTAAGGAAGCAGTTCGCCTTAATATTAATGAGGAAGATTTAAAAAAATTAATT
GAACAGGGGTATAAATCTAT

Downstream 100 bases:

>100_bases
AGTAGCTAGCGTAATCAAGTACGATTTAAGTTATTTTGTCCGCTTGATTTTAATTGTTTACCTGTGGCTAATTGGTTTGC
TGGTAGGAATTCCAGTGCTA

Product: ABC-type multidrug transport system, ATPase component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 288; Mature: 288

Protein sequence:

>288_residues
MKGIEVKQVTKSFDKKMILNGIGMTIEPNKIYGLLGRNGAGKSTLLSLLVNRIAPDTGEIRLDNKVIRDNDEQLSKMFLM
SEVDLYPKNLKVKDVFKWTKSFYGGFDEELAQDLCEKFGLQTNIIFNKLSTGYRTIMKLIVALAVPVEYVFLDEPILGLD
AGHREIFYNALVETYAENPRTFVISTHLIEEIANLIEHVLVIDHGRLIVDDETEKVLGEAYVVSGPEDKVDEYTQGLNVI
GSDKLARIKASYVFGSLDNKPISDLINIDQMDLQTLFVNLTNGGNENE

Sequences:

>Translated_288_residues
MKGIEVKQVTKSFDKKMILNGIGMTIEPNKIYGLLGRNGAGKSTLLSLLVNRIAPDTGEIRLDNKVIRDNDEQLSKMFLM
SEVDLYPKNLKVKDVFKWTKSFYGGFDEELAQDLCEKFGLQTNIIFNKLSTGYRTIMKLIVALAVPVEYVFLDEPILGLD
AGHREIFYNALVETYAENPRTFVISTHLIEEIANLIEHVLVIDHGRLIVDDETEKVLGEAYVVSGPEDKVDEYTQGLNVI
GSDKLARIKASYVFGSLDNKPISDLINIDQMDLQTLFVNLTNGGNENE
>Mature_288_residues
MKGIEVKQVTKSFDKKMILNGIGMTIEPNKIYGLLGRNGAGKSTLLSLLVNRIAPDTGEIRLDNKVIRDNDEQLSKMFLM
SEVDLYPKNLKVKDVFKWTKSFYGGFDEELAQDLCEKFGLQTNIIFNKLSTGYRTIMKLIVALAVPVEYVFLDEPILGLD
AGHREIFYNALVETYAENPRTFVISTHLIEEIANLIEHVLVIDHGRLIVDDETEKVLGEAYVVSGPEDKVDEYTQGLNVI
GSDKLARIKASYVFGSLDNKPISDLINIDQMDLQTLFVNLTNGGNENE

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transporter domain [H]

Homologues:

Organism=Homo sapiens, GI31657092, Length=261, Percent_Identity=26.0536398467433, Blast_Score=75, Evalue=8e-14,
Organism=Homo sapiens, GI45446740, Length=210, Percent_Identity=26.1904761904762, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI47078218, Length=210, Percent_Identity=26.1904761904762, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI27262624, Length=254, Percent_Identity=23.6220472440945, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI27262626, Length=254, Percent_Identity=23.6220472440945, Blast_Score=70, Evalue=3e-12,
Organism=Homo sapiens, GI116734710, Length=216, Percent_Identity=27.7777777777778, Blast_Score=67, Evalue=3e-11,
Organism=Homo sapiens, GI105990541, Length=215, Percent_Identity=26.046511627907, Blast_Score=65, Evalue=6e-11,
Organism=Escherichia coli, GI1788450, Length=217, Percent_Identity=27.1889400921659, Blast_Score=76, Evalue=2e-15,
Organism=Escherichia coli, GI87081782, Length=217, Percent_Identity=25.8064516129032, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI1788225, Length=227, Percent_Identity=26.431718061674, Blast_Score=75, Evalue=5e-15,
Organism=Escherichia coli, GI48994943, Length=222, Percent_Identity=24.3243243243243, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI87081791, Length=219, Percent_Identity=27.3972602739726, Blast_Score=70, Evalue=2e-13,
Organism=Escherichia coli, GI1787029, Length=245, Percent_Identity=27.3469387755102, Blast_Score=68, Evalue=7e-13,
Organism=Escherichia coli, GI1790739, Length=228, Percent_Identity=23.6842105263158, Blast_Score=67, Evalue=2e-12,
Organism=Escherichia coli, GI48995001, Length=217, Percent_Identity=24.8847926267281, Blast_Score=65, Evalue=7e-12,
Organism=Escherichia coli, GI1786345, Length=227, Percent_Identity=22.9074889867841, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1789751, Length=180, Percent_Identity=27.7777777777778, Blast_Score=62, Evalue=5e-11,
Organism=Escherichia coli, GI1789593, Length=237, Percent_Identity=24.4725738396624, Blast_Score=61, Evalue=8e-11,
Organism=Escherichia coli, GI1787758, Length=214, Percent_Identity=23.3644859813084, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1788540, Length=201, Percent_Identity=29.8507462686567, Blast_Score=61, Evalue=9e-11,
Organism=Escherichia coli, GI1788165, Length=202, Percent_Identity=25.7425742574257, Blast_Score=61, Evalue=9e-11,
Organism=Caenorhabditis elegans, GI115533608, Length=216, Percent_Identity=25.462962962963, Blast_Score=83, Evalue=1e-16,
Organism=Caenorhabditis elegans, GI17565586, Length=213, Percent_Identity=26.7605633802817, Blast_Score=69, Evalue=2e-12,
Organism=Caenorhabditis elegans, GI71983523, Length=225, Percent_Identity=22.6666666666667, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71983516, Length=225, Percent_Identity=22.6666666666667, Blast_Score=67, Evalue=9e-12,
Organism=Caenorhabditis elegans, GI71983510, Length=225, Percent_Identity=22.6666666666667, Blast_Score=67, Evalue=1e-11,
Organism=Drosophila melanogaster, GI221500365, Length=232, Percent_Identity=26.7241379310345, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24650853, Length=232, Percent_Identity=28.8793103448276, Blast_Score=77, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24650855, Length=232, Percent_Identity=28.8793103448276, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI116007184, Length=232, Percent_Identity=26.7241379310345, Blast_Score=76, Evalue=2e-14,
Organism=Drosophila melanogaster, GI281362751, Length=228, Percent_Identity=28.9473684210526, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24643674, Length=237, Percent_Identity=24.8945147679325, Blast_Score=76, Evalue=3e-14,
Organism=Drosophila melanogaster, GI24582014, Length=231, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24582012, Length=231, Percent_Identity=27.2727272727273, Blast_Score=74, Evalue=8e-14,
Organism=Drosophila melanogaster, GI24666092, Length=213, Percent_Identity=24.8826291079812, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003439
- InterPro:   IPR003593 [H]

Pfam domain/function: PF00005 ABC_tran [H]

EC number: NA

Molecular weight: Translated: 32340; Mature: 32340

Theoretical pI: Translated: 4.60; Mature: 4.60

Prosite motif: PS50893 ABC_TRANSPORTER_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGIEVKQVTKSFDKKMILNGIGMTIEPNKIYGLLGRNGAGKSTLLSLLVNRIAPDTGEI
CCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCE
RLDNKVIRDNDEQLSKMFLMSEVDLYPKNLKVKDVFKWTKSFYGGFDEELAQDLCEKFGL
EECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
QTNIIFNKLSTGYRTIMKLIVALAVPVEYVFLDEPILGLDAGHREIFYNALVETYAENPR
CHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
TFVISTHLIEEIANLIEHVLVIDHGRLIVDDETEKVLGEAYVVSGPEDKVDEYTQGLNVI
EEEEEHHHHHHHHHHHHHHHHEECCEEEECCCHHHHHCCEEEECCCHHHHHHHHHCCCCC
GSDKLARIKASYVFGSLDNKPISDLINIDQMDLQTLFVNLTNGGNENE
CCCHHHHHHHHHEECCCCCCCHHHHHCCCHHEEEEEEEEECCCCCCCC
>Mature Secondary Structure
MKGIEVKQVTKSFDKKMILNGIGMTIEPNKIYGLLGRNGAGKSTLLSLLVNRIAPDTGEI
CCCCHHHHHHHHHHHHHHHHCCCCEECCCCEEEEECCCCCCHHHHHHHHHHHHCCCCCCE
RLDNKVIRDNDEQLSKMFLMSEVDLYPKNLKVKDVFKWTKSFYGGFDEELAQDLCEKFGL
EECCCCCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCC
QTNIIFNKLSTGYRTIMKLIVALAVPVEYVFLDEPILGLDAGHREIFYNALVETYAENPR
CHHHHHHHHHHHHHHHHHHHHHHHCCHHEEEECCCCCCCCCCHHHHHHHHHHHHHHCCCC
TFVISTHLIEEIANLIEHVLVIDHGRLIVDDETEKVLGEAYVVSGPEDKVDEYTQGLNVI
EEEEEHHHHHHHHHHHHHHHHEECCEEEECCCHHHHHCCEEEECCCHHHHHHHHHCCCCC
GSDKLARIKASYVFGSLDNKPISDLINIDQMDLQTLFVNLTNGGNENE
CCCHHHHHHHHHEECCCCCCCHHHHHCCCHHEEEEEEEEECCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8969498; 9384377 [H]