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The map label for this gene is 116493053

Identifier: 116493053

GI number: 116493053

Start: 1297479

End: 1298234

Strand: Reverse

Name: 116493053

Synonym: PEPE_1305

Alternate gene names: NA

Gene position: 1298234-1297479 (Counterclockwise)

Preceding gene: 116493054

Following gene: 116493051

Centisome position: 70.85

GC content: 34.39

Gene sequence:

>756_bases
ATGGATCAGACAAGCAATAGAACATTAAAGAAAGAAGTCCTAGAACTCTATCGGGGAAACTGGATAACAGCAATTAAAAT
TAACATTATACCAATTGTTTGCTCCATTTTTAGTGGATTTATAATTGCTAGTTTGATTGGAATAATTTTATATTTTTTTA
GTCAGATTGATAGCAGCGCACTAGGTACAATGGGAAATTACAGTCAAAATTCAGGGACCCCTTATTCAGGCAGGACGACT
GCTCAACAATTTTTCTTTCAAGCAATCGTAGTATTTTTTACAGTGGGAATTCAATACGGAATTTTAGATTGGTTACGACA
CCGAAATCAGCGTCTTTCATGGGGGACAGCCTTCCAAACCTTTAGCAGAAAGTATTTTACATCAACTCTAGCTATTTTTA
TTTTTCAATTTATTTTCCGCTTCTTATGGTCCTTCTTGCTCATTATTCCGGGTTGGATCAAATATTATTCGTATTCACAA
GCCTATTTTCTTTATAAAGAAGCCACTGATCGGAAGATAAGTGATCGTTTTGAATTTGTTAATTTCATTACTTTTAGTCG
ACGACTCATGGATGGCAATAAGGCAAGATTACTGGGATTACAAATTTCATTAATTGGATGGTACATTTTAAGCATCATTA
CGTTTGGAATAGGATTTATTTGGTACGTTCCCTATCGCAACGGGCTTTATGCCGTATTTTATAAAAATTTAGTTGAACAG
CGTGGTCAACAAATTCTTCCAGAAATATTTGGATGA

Upstream 100 bases:

>100_bases
ATTCCAGCGACAGGTATGGTAATATTGATTGTATTATCTTTGATAATCTCAAGATGGTTAAATACATTATTACGTACTAA
ACGAGGAGAATGACTTTTAT

Downstream 100 bases:

>100_bases
CAAAAACGCATCTAAACTTAGTTAAAAGCTAAGTTTAGATGCGTTTTTTAATCTGTAGTATGTCTTGCTCCGTAGAAAGT
GTAAACAATAATTCCAATGA

Product: integral membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 251; Mature: 251

Protein sequence:

>251_residues
MDQTSNRTLKKEVLELYRGNWITAIKINIIPIVCSIFSGFIIASLIGIILYFFSQIDSSALGTMGNYSQNSGTPYSGRTT
AQQFFFQAIVVFFTVGIQYGILDWLRHRNQRLSWGTAFQTFSRKYFTSTLAIFIFQFIFRFLWSFLLIIPGWIKYYSYSQ
AYFLYKEATDRKISDRFEFVNFITFSRRLMDGNKARLLGLQISLIGWYILSIITFGIGFIWYVPYRNGLYAVFYKNLVEQ
RGQQILPEIFG

Sequences:

>Translated_251_residues
MDQTSNRTLKKEVLELYRGNWITAIKINIIPIVCSIFSGFIIASLIGIILYFFSQIDSSALGTMGNYSQNSGTPYSGRTT
AQQFFFQAIVVFFTVGIQYGILDWLRHRNQRLSWGTAFQTFSRKYFTSTLAIFIFQFIFRFLWSFLLIIPGWIKYYSYSQ
AYFLYKEATDRKISDRFEFVNFITFSRRLMDGNKARLLGLQISLIGWYILSIITFGIGFIWYVPYRNGLYAVFYKNLVEQ
RGQQILPEIFG
>Mature_251_residues
MDQTSNRTLKKEVLELYRGNWITAIKINIIPIVCSIFSGFIIASLIGIILYFFSQIDSSALGTMGNYSQNSGTPYSGRTT
AQQFFFQAIVVFFTVGIQYGILDWLRHRNQRLSWGTAFQTFSRKYFTSTLAIFIFQFIFRFLWSFLLIIPGWIKYYSYSQ
AYFLYKEATDRKISDRFEFVNFITFSRRLMDGNKARLLGLQISLIGWYILSIITFGIGFIWYVPYRNGLYAVFYKNLVEQ
RGQQILPEIFG

Specific function: Unknown

COG id: COG5523

COG function: function code S; Predicted integral membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29404; Mature: 29404

Theoretical pI: Translated: 10.14; Mature: 10.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDQTSNRTLKKEVLELYRGNWITAIKINIIPIVCSIFSGFIIASLIGIILYFFSQIDSSA
CCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LGTMGNYSQNSGTPYSGRTTAQQFFFQAIVVFFTVGIQYGILDWLRHRNQRLSWGTAFQT
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FSRKYFTSTLAIFIFQFIFRFLWSFLLIIPGWIKYYSYSQAYFLYKEATDRKISDRFEFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHCCCHHHHHHHHH
NFITFSRRLMDGNKARLLGLQISLIGWYILSIITFGIGFIWYVPYRNGLYAVFYKNLVEQ
HHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
RGQQILPEIFG
HHHHHHHHHCC
>Mature Secondary Structure
MDQTSNRTLKKEVLELYRGNWITAIKINIIPIVCSIFSGFIIASLIGIILYFFSQIDSSA
CCCCCCHHHHHHHHHHHCCCEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHH
LGTMGNYSQNSGTPYSGRTTAQQFFFQAIVVFFTVGIQYGILDWLRHRNQRLSWGTAFQT
HCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHH
FSRKYFTSTLAIFIFQFIFRFLWSFLLIIPGWIKYYSYSQAYFLYKEATDRKISDRFEFV
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHEEEHHHCCCHHHHHHHHH
NFITFSRRLMDGNKARLLGLQISLIGWYILSIITFGIGFIWYVPYRNGLYAVFYKNLVEQ
HHHHHHHHHHCCCCHHEEHHHHHHHHHHHHHHHHHHHHHHEEECCCCCCHHHHHHHHHHH
RGQQILPEIFG
HHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA