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The map label for this gene is 116493035

Identifier: 116493035

GI number: 116493035

Start: 1277854

End: 1278399

Strand: Reverse

Name: 116493035

Synonym: PEPE_1287

Alternate gene names: NA

Gene position: 1278399-1277854 (Counterclockwise)

Preceding gene: 116493036

Following gene: 116493034

Centisome position: 69.77

GC content: 29.67

Gene sequence:

>546_bases
ATGTTACAATCTGCAAAATTAAAATATATTTTTCCTATCGTTTTATTGATTGCTTTTTTTCTAGATGGTTCATTAAATCA
AATTTTTTCGTCAACTTTATTTCAATATCCATATTCGATGATTTGTAATCTAACGTTGATGTGGTTTGTAATGGCGATCT
TTTTTGAAGGAGAATCTCAAATTAATTTCACATTGTGGTCATTTGTTATTGGGATTATATTTGATTGGTATTATACTGGA
GTTTTTGGCGTGGATACTTTTATTATTCCAATCGTAGTGATGTTTATTCGTGGAATTCGACCTTTTGTTAAAACAACATT
CTTGATAGTGTTGGGGATGGATATGTTTGCGATGGCGATGTATAACATCTTATTTTTCATCGTTTTTCAAATGATTAAGA
TGGCGAATGTGACTACCACATTTTTCATCGGATATTCGTTTTTACCAACCATTATTCTCAATTTATCAATTTTTGTAATT
CTATATTACCCAATTAAAACCGTATTTAGAAGAACACGGGGAACCAATTCAAGAAGTTTTATGTAA

Upstream 100 bases:

>100_bases
AGATGATTATGGGTTAGCTAGCGAAATTCGAATCGAACCAGCAGCTAAATTAAGCAATGTTAACAACGTTTATATTGCTA
AGTTAGATTAGGGTGAAAGC

Downstream 100 bases:

>100_bases
TAAGGACTTGAAAGTTTTAAATATAATTGATATTATTTGTATACTTTAGCAATGATCAGAAAAGTAGTTTATGTAATCTT
CGTTAAGCGAGCCGTGGACA

Product: rod shape-determining protein MreD

Products: NA

Alternate protein names: Cell Shape Determining Protein MreD; Cell Shape-Determining Protein; Rod Shape-Determining Protein; Cell Shape Determining Protein

Number of amino acids: Translated: 181; Mature: 181

Protein sequence:

>181_residues
MLQSAKLKYIFPIVLLIAFFLDGSLNQIFSSTLFQYPYSMICNLTLMWFVMAIFFEGESQINFTLWSFVIGIIFDWYYTG
VFGVDTFIIPIVVMFIRGIRPFVKTTFLIVLGMDMFAMAMYNILFFIVFQMIKMANVTTTFFIGYSFLPTIILNLSIFVI
LYYPIKTVFRRTRGTNSRSFM

Sequences:

>Translated_181_residues
MLQSAKLKYIFPIVLLIAFFLDGSLNQIFSSTLFQYPYSMICNLTLMWFVMAIFFEGESQINFTLWSFVIGIIFDWYYTG
VFGVDTFIIPIVVMFIRGIRPFVKTTFLIVLGMDMFAMAMYNILFFIVFQMIKMANVTTTFFIGYSFLPTIILNLSIFVI
LYYPIKTVFRRTRGTNSRSFM
>Mature_181_residues
MLQSAKLKYIFPIVLLIAFFLDGSLNQIFSSTLFQYPYSMICNLTLMWFVMAIFFEGESQINFTLWSFVIGIIFDWYYTG
VFGVDTFIIPIVVMFIRGIRPFVKTTFLIVLGMDMFAMAMYNILFFIVFQMIKMANVTTTFFIGYSFLPTIILNLSIFVI
LYYPIKTVFRRTRGTNSRSFM

Specific function: Unknown

COG id: COG2891

COG function: function code M; Cell shape-determining protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21223; Mature: 21223

Theoretical pI: Translated: 9.74; Mature: 9.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
6.6 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
6.6 %Met     (Mature Protein)
7.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQSAKLKYIFPIVLLIAFFLDGSLNQIFSSTLFQYPYSMICNLTLMWFVMAIFFEGESQ
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
INFTLWSFVIGIIFDWYYTGVFGVDTFIIPIVVMFIRGIRPFVKTTFLIVLGMDMFAMAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YNILFFIVFQMIKMANVTTTFFIGYSFLPTIILNLSIFVILYYPIKTVFRRTRGTNSRSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
M
C
>Mature Secondary Structure
MLQSAKLKYIFPIVLLIAFFLDGSLNQIFSSTLFQYPYSMICNLTLMWFVMAIFFEGESQ
CCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
INFTLWSFVIGIIFDWYYTGVFGVDTFIIPIVVMFIRGIRPFVKTTFLIVLGMDMFAMAM
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHH
YNILFFIVFQMIKMANVTTTFFIGYSFLPTIILNLSIFVILYYPIKTVFRRTRGTNSRSF
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
M
C

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA