| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is cshB [H]
Identifier: 116493012
GI number: 116493012
Start: 1250574
End: 1251935
Strand: Reverse
Name: cshB [H]
Synonym: PEPE_1264
Alternate gene names: 116493012
Gene position: 1251935-1250574 (Counterclockwise)
Preceding gene: 116493013
Following gene: 116493011
Centisome position: 68.32
GC content: 37.89
Gene sequence:
>1362_bases ATGAACGAATTTCAGAAGTTTAATCTAAAACCATTTTTAATGACGGCTTTAGATGAGATTAATTTTAAGACACCTACCCC TGTACAGGATAAAGTGATTCCACTTATTGCTGATGGAAAGAGTGTTGTCGGACAATCTCAAACGGGGAGTGGTAAAACCC ATGCTTTTCTTTTACCAATTTTTAACAATATCGATCCGGAATTAAATGCAATTCAAGCAGTAATTACGACACCTAGTCGT GAATTGGCTTATCAAATTTATGAAGATGCTAAGCAATTAGCCTCAGCTTCAGAAGTTAAGATTGAAATTGGCAATTACGT TGGTGGAACTGATAAGAAACGTCAAGTTGAAAAATTAGGACATCATCAACCAGCTATCATCATTGGTACACCAGGACGAG TTTTGGACTTGTTAAAGGAACGGGCCTTGAACTTCCGTCAAGTGAAGTATATGGTTATTGACGAAGCTGATATGACCTTA GATATGGGATTTTTAAACGCGGTAGATCAAATTGCTGCTGCAATGCCATCTAAGCTGCAAATTTTGGTTTTCTCAGCTAC CATTCCACAACGGCTAAATGTATTTTTGAAGAAGTATATGGATCATCCGGTAATTGAAGAGATTCCTACCGAAACAACTA TTAGCCCTACCATCAAGAATATCTTGATTTCAACTAAGAGTTCTGGCAAAAATAATTTAATTTATAAATTATTGACTATG GGAGAGCCCTATCTAGCTTTAGTTTTCACCAACACTAAGGAACGTGCTGATGAGTTGACCGATTATCTTAAAGCTCAGGG ACTCGATGTTGCTAAAATTCATGGTGGTATCCAACCACGTGAACGTAAACGAATTATGAAGGATATTCATCGTCTTCGTT ATCAATACGTTGTAGCAACTGATTTGGCTGCTCGTGGAATCGATATTGATGGAGTTTCACTAGTAATTAATGATGATATT CCGACAGACCTTGAATTCTTTATCCATCGAGTGGGTCGTACTGGTCGAAATGGTATGTCAGGAACCGCAATTACCTTATA TATGCCTAATGAAGAAGACAAAGTAGCTGATGTCGAAAAGATGGGAATTACATTCTTACCTCAACAGATTCGAAACAACG AATTAGTTGATACGTACGATCGTGATCGTCGTCAGACGCGTCGTCTGAGTCAAAAGAAACTTGACCCAACCATGATTGGG ATGGTTAAGAAAAAGAAGAAAAAGGTTAAACCAGGTTACAAGCGTCGAATTCGCAAAGCAATTTCAGAAAAAGAAATTCG TGATCGTCGTATGGAACAACATCAAGCAGTTCGTGAAGCCAAAAAGGCTAAGATAAAACAATCACGAAATAAGCGAAGAT AA
Upstream 100 bases:
>100_bases GTGGTCATCCATTAGCTAGTGGTGCGAAGGCAGCTAACATTGAAGAAGTTAACCAAATTGTAAGTGAATTAGATCAATTG GTTTAGACAAGGAGTATTTA
Downstream 100 bases:
>100_bases ATTGACATTTTAAAGTTGATTTTCTATAATTAGCTGTAATATTTTTAAAATCATTTGAGATATGTAGGAGCTAACCCCTT AGTGCAAGAGACATTCTGGC
Product: superfamily II DNA/RNA helicase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 453; Mature: 453
Protein sequence:
>453_residues MNEFQKFNLKPFLMTALDEINFKTPTPVQDKVIPLIADGKSVVGQSQTGSGKTHAFLLPIFNNIDPELNAIQAVITTPSR ELAYQIYEDAKQLASASEVKIEIGNYVGGTDKKRQVEKLGHHQPAIIIGTPGRVLDLLKERALNFRQVKYMVIDEADMTL DMGFLNAVDQIAAAMPSKLQILVFSATIPQRLNVFLKKYMDHPVIEEIPTETTISPTIKNILISTKSSGKNNLIYKLLTM GEPYLALVFTNTKERADELTDYLKAQGLDVAKIHGGIQPRERKRIMKDIHRLRYQYVVATDLAARGIDIDGVSLVINDDI PTDLEFFIHRVGRTGRNGMSGTAITLYMPNEEDKVADVEKMGITFLPQQIRNNELVDTYDRDRRQTRRLSQKKLDPTMIG MVKKKKKKVKPGYKRRIRKAISEKEIRDRRMEQHQAVREAKKAKIKQSRNKRR
Sequences:
>Translated_453_residues MNEFQKFNLKPFLMTALDEINFKTPTPVQDKVIPLIADGKSVVGQSQTGSGKTHAFLLPIFNNIDPELNAIQAVITTPSR ELAYQIYEDAKQLASASEVKIEIGNYVGGTDKKRQVEKLGHHQPAIIIGTPGRVLDLLKERALNFRQVKYMVIDEADMTL DMGFLNAVDQIAAAMPSKLQILVFSATIPQRLNVFLKKYMDHPVIEEIPTETTISPTIKNILISTKSSGKNNLIYKLLTM GEPYLALVFTNTKERADELTDYLKAQGLDVAKIHGGIQPRERKRIMKDIHRLRYQYVVATDLAARGIDIDGVSLVINDDI PTDLEFFIHRVGRTGRNGMSGTAITLYMPNEEDKVADVEKMGITFLPQQIRNNELVDTYDRDRRQTRRLSQKKLDPTMIG MVKKKKKKVKPGYKRRIRKAISEKEIRDRRMEQHQAVREAKKAKIKQSRNKRR >Mature_453_residues MNEFQKFNLKPFLMTALDEINFKTPTPVQDKVIPLIADGKSVVGQSQTGSGKTHAFLLPIFNNIDPELNAIQAVITTPSR ELAYQIYEDAKQLASASEVKIEIGNYVGGTDKKRQVEKLGHHQPAIIIGTPGRVLDLLKERALNFRQVKYMVIDEADMTL DMGFLNAVDQIAAAMPSKLQILVFSATIPQRLNVFLKKYMDHPVIEEIPTETTISPTIKNILISTKSSGKNNLIYKLLTM GEPYLALVFTNTKERADELTDYLKAQGLDVAKIHGGIQPRERKRIMKDIHRLRYQYVVATDLAARGIDIDGVSLVINDDI PTDLEFFIHRVGRTGRNGMSGTAITLYMPNEEDKVADVEKMGITFLPQQIRNNELVDTYDRDRRQTRRLSQKKLDPTMIG MVKKKKKKVKPGYKRRIRKAISEKEIRDRRMEQHQAVREAKKAKIKQSRNKRR
Specific function: May work in conjunction with the cold shock proteins to ensure proper initiation of transcription at low and optimal temperatures [H]
COG id: COG0513
COG function: function code LKJ; Superfamily II DNA and RNA helicases
Gene ontology:
Cell location: Cytoplasm, nucleoid. Note=Shows transcription-dependent localization at subcellular sites surrounding the nucleoid [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 helicase C-terminal domain [H]
Homologues:
Organism=Homo sapiens, GI51094101, Length=352, Percent_Identity=35.5113636363636, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI164419743, Length=352, Percent_Identity=35.5113636363636, Blast_Score=208, Evalue=8e-54, Organism=Homo sapiens, GI7661920, Length=358, Percent_Identity=31.2849162011173, Blast_Score=206, Evalue=4e-53, Organism=Homo sapiens, GI301171467, Length=372, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=1e-52, Organism=Homo sapiens, GI87196351, Length=372, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI301171475, Length=372, Percent_Identity=33.3333333333333, Blast_Score=204, Evalue=2e-52, Organism=Homo sapiens, GI169881239, Length=372, Percent_Identity=33.0645161290323, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI13514809, Length=372, Percent_Identity=33.0645161290323, Blast_Score=201, Evalue=1e-51, Organism=Homo sapiens, GI188035877, Length=400, Percent_Identity=32.75, Blast_Score=196, Evalue=4e-50, Organism=Homo sapiens, GI4503529, Length=368, Percent_Identity=34.7826086956522, Blast_Score=193, Evalue=3e-49, Organism=Homo sapiens, GI45446747, Length=367, Percent_Identity=33.5149863760218, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI45446743, Length=367, Percent_Identity=33.5149863760218, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI20149629, Length=344, Percent_Identity=33.1395348837209, Blast_Score=192, Evalue=5e-49, Organism=Homo sapiens, GI83700235, Length=368, Percent_Identity=33.695652173913, Blast_Score=190, Evalue=3e-48, Organism=Homo sapiens, GI21040371, Length=374, Percent_Identity=30.4812834224599, Blast_Score=189, Evalue=5e-48, Organism=Homo sapiens, GI262118318, Length=376, Percent_Identity=33.2446808510638, Blast_Score=189, Evalue=6e-48, Organism=Homo sapiens, GI31542656, Length=354, Percent_Identity=33.6158192090396, Blast_Score=189, Evalue=7e-48, Organism=Homo sapiens, GI222352149, Length=398, Percent_Identity=30.6532663316583, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI216548263, Length=367, Percent_Identity=33.7874659400545, Blast_Score=188, Evalue=8e-48, Organism=Homo sapiens, GI41327771, Length=378, Percent_Identity=30.952380952381, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI262231852, Length=367, Percent_Identity=33.7874659400545, Blast_Score=188, Evalue=1e-47, Organism=Homo sapiens, GI13518015, Length=367, Percent_Identity=33.7874659400545, Blast_Score=187, Evalue=1e-47, Organism=Homo sapiens, GI164664518, Length=359, Percent_Identity=29.5264623955432, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI4758112, Length=374, Percent_Identity=29.9465240641711, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI18375623, Length=374, Percent_Identity=29.9465240641711, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI148613856, Length=359, Percent_Identity=33.1476323119777, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI38201710, Length=359, Percent_Identity=33.1476323119777, Blast_Score=187, Evalue=2e-47, Organism=Homo sapiens, GI41327773, Length=355, Percent_Identity=31.5492957746479, Blast_Score=184, Evalue=1e-46, Organism=Homo sapiens, GI4758138, Length=367, Percent_Identity=33.7874659400545, Blast_Score=183, Evalue=3e-46, Organism=Homo sapiens, GI50659095, Length=358, Percent_Identity=32.9608938547486, Blast_Score=181, Evalue=1e-45, Organism=Homo sapiens, GI224593278, Length=379, Percent_Identity=30.3430079155673, Blast_Score=181, Evalue=2e-45, Organism=Homo sapiens, GI21071032, Length=359, Percent_Identity=30.3621169916435, Blast_Score=175, Evalue=8e-44, Organism=Homo sapiens, GI13129006, Length=358, Percent_Identity=31.5642458100559, Blast_Score=172, Evalue=6e-43, Organism=Homo sapiens, GI41327776, Length=344, Percent_Identity=31.9767441860465, Blast_Score=170, Evalue=3e-42, Organism=Homo sapiens, GI256223453, Length=396, Percent_Identity=29.040404040404, Blast_Score=169, Evalue=6e-42, Organism=Homo sapiens, GI55749865, Length=351, Percent_Identity=29.6296296296296, Blast_Score=168, Evalue=8e-42, Organism=Homo sapiens, GI41327779, Length=371, Percent_Identity=30.9973045822102, Blast_Score=167, Evalue=2e-41, Organism=Homo sapiens, GI38569505, Length=384, Percent_Identity=30.46875, Blast_Score=164, Evalue=2e-40, Organism=Homo sapiens, GI38569503, Length=384, Percent_Identity=30.46875, Blast_Score=163, Evalue=4e-40, Organism=Homo sapiens, GI13514831, Length=357, Percent_Identity=29.1316526610644, Blast_Score=161, Evalue=9e-40, Organism=Homo sapiens, GI6005743, Length=358, Percent_Identity=30.1675977653631, Blast_Score=159, Evalue=7e-39, Organism=Homo sapiens, GI8922886, Length=358, Percent_Identity=29.8882681564246, Blast_Score=157, Evalue=1e-38, Organism=Homo sapiens, GI9506931, Length=446, Percent_Identity=24.8878923766816, Blast_Score=155, Evalue=5e-38, Organism=Homo sapiens, GI62241022, Length=342, Percent_Identity=30.1169590643275, Blast_Score=149, Evalue=5e-36, Organism=Homo sapiens, GI164419732, Length=346, Percent_Identity=29.4797687861272, Blast_Score=142, Evalue=8e-34, Organism=Homo sapiens, GI62241024, Length=320, Percent_Identity=30.625, Blast_Score=142, Evalue=9e-34, Organism=Homo sapiens, GI256773275, Length=381, Percent_Identity=28.6089238845144, Blast_Score=135, Evalue=7e-32, Organism=Homo sapiens, GI38327634, Length=350, Percent_Identity=30, Blast_Score=133, Evalue=4e-31, Organism=Homo sapiens, GI154759257, Length=404, Percent_Identity=28.2178217821782, Blast_Score=122, Evalue=6e-28, Organism=Homo sapiens, GI9966805, Length=311, Percent_Identity=29.903536977492, Blast_Score=120, Evalue=4e-27, Organism=Homo sapiens, GI4826686, Length=389, Percent_Identity=27.7634961439589, Blast_Score=117, Evalue=2e-26, Organism=Homo sapiens, GI17505907, Length=200, Percent_Identity=32, Blast_Score=94, Evalue=4e-19, Organism=Homo sapiens, GI20336298, Length=200, Percent_Identity=32, Blast_Score=92, Evalue=7e-19, Organism=Escherichia coli, GI87082221, Length=375, Percent_Identity=34.6666666666667, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI1787605, Length=362, Percent_Identity=36.1878453038674, Blast_Score=223, Evalue=2e-59, Organism=Escherichia coli, GI1790214, Length=353, Percent_Identity=36.2606232294618, Blast_Score=212, Evalue=4e-56, Organism=Escherichia coli, GI1787016, Length=364, Percent_Identity=32.6923076923077, Blast_Score=208, Evalue=6e-55, Organism=Escherichia coli, GI1788930, Length=343, Percent_Identity=33.2361516034985, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI48994977, Length=469, Percent_Identity=19.8294243070362, Blast_Score=64, Evalue=1e-11, Organism=Caenorhabditis elegans, GI71995724, Length=361, Percent_Identity=32.1329639889197, Blast_Score=209, Evalue=3e-54, Organism=Caenorhabditis elegans, GI17507121, Length=361, Percent_Identity=31.8559556786704, Blast_Score=208, Evalue=5e-54, Organism=Caenorhabditis elegans, GI86570094, Length=359, Percent_Identity=35.0974930362117, Blast_Score=206, Evalue=1e-53, Organism=Caenorhabditis elegans, GI71987143, Length=362, Percent_Identity=32.3204419889503, Blast_Score=200, Evalue=1e-51, Organism=Caenorhabditis elegans, GI71999644, Length=405, Percent_Identity=31.358024691358, Blast_Score=197, Evalue=7e-51, Organism=Caenorhabditis elegans, GI71999646, Length=405, Percent_Identity=31.358024691358, Blast_Score=197, Evalue=8e-51, Organism=Caenorhabditis elegans, GI17552642, Length=351, Percent_Identity=34.4729344729345, Blast_Score=192, Evalue=3e-49, Organism=Caenorhabditis elegans, GI17552114, Length=349, Percent_Identity=30.6590257879656, Blast_Score=192, Evalue=4e-49, Organism=Caenorhabditis elegans, GI71982858, Length=374, Percent_Identity=31.5508021390374, Blast_Score=190, Evalue=2e-48, Organism=Caenorhabditis elegans, GI193206561, Length=326, Percent_Identity=33.1288343558282, Blast_Score=187, Evalue=1e-47, Organism=Caenorhabditis elegans, GI17507945, Length=337, Percent_Identity=33.2344213649852, Blast_Score=186, Evalue=2e-47, Organism=Caenorhabditis elegans, GI71995718, Length=368, Percent_Identity=32.3369565217391, Blast_Score=185, Evalue=5e-47, Organism=Caenorhabditis elegans, GI17510307, Length=367, Percent_Identity=33.5149863760218, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI17510309, Length=367, Percent_Identity=33.5149863760218, Blast_Score=184, Evalue=6e-47, Organism=Caenorhabditis elegans, GI71995514, Length=367, Percent_Identity=33.5149863760218, Blast_Score=184, Evalue=1e-46, Organism=Caenorhabditis elegans, GI17537549, Length=382, Percent_Identity=31.151832460733, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI17555296, Length=417, Percent_Identity=28.537170263789, Blast_Score=178, Evalue=5e-45, Organism=Caenorhabditis elegans, GI32565321, Length=371, Percent_Identity=30.9973045822102, Blast_Score=177, Evalue=9e-45, Organism=Caenorhabditis elegans, GI115533224, Length=363, Percent_Identity=30.5785123966942, Blast_Score=173, Evalue=2e-43, Organism=Caenorhabditis elegans, GI115532548, Length=369, Percent_Identity=28.4552845528455, Blast_Score=166, Evalue=2e-41, Organism=Caenorhabditis elegans, GI115532546, Length=369, Percent_Identity=28.4552845528455, Blast_Score=165, Evalue=4e-41, Organism=Caenorhabditis elegans, GI17507877, Length=398, Percent_Identity=31.6582914572864, Blast_Score=163, Evalue=2e-40, Organism=Caenorhabditis elegans, GI17507881, Length=382, Percent_Identity=32.4607329842932, Blast_Score=160, Evalue=9e-40, Organism=Caenorhabditis elegans, GI17510559, Length=410, Percent_Identity=26.3414634146341, Blast_Score=160, Evalue=1e-39, Organism=Caenorhabditis elegans, GI17508543, Length=364, Percent_Identity=30.2197802197802, Blast_Score=159, Evalue=3e-39, Organism=Caenorhabditis elegans, GI17553716, Length=354, Percent_Identity=29.0960451977401, Blast_Score=155, Evalue=4e-38, Organism=Caenorhabditis elegans, GI17507879, Length=379, Percent_Identity=30.6068601583113, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17509811, Length=385, Percent_Identity=27.012987012987, Blast_Score=153, Evalue=2e-37, Organism=Caenorhabditis elegans, GI17536099, Length=372, Percent_Identity=29.5698924731183, Blast_Score=149, Evalue=3e-36, Organism=Caenorhabditis elegans, GI17536101, Length=372, Percent_Identity=29.5698924731183, Blast_Score=148, Evalue=7e-36, Organism=Caenorhabditis elegans, GI17536103, Length=374, Percent_Identity=29.6791443850267, Blast_Score=143, Evalue=2e-34, Organism=Caenorhabditis elegans, GI25148203, Length=436, Percent_Identity=26.8348623853211, Blast_Score=140, Evalue=1e-33, Organism=Caenorhabditis elegans, GI17507641, Length=397, Percent_Identity=26.1964735516373, Blast_Score=137, Evalue=1e-32, Organism=Caenorhabditis elegans, GI17505370, Length=354, Percent_Identity=30.7909604519774, Blast_Score=136, Evalue=3e-32, Organism=Caenorhabditis elegans, GI71990816, Length=379, Percent_Identity=28.2321899736148, Blast_Score=132, Evalue=4e-31, Organism=Caenorhabditis elegans, GI32564046, Length=375, Percent_Identity=26.9333333333333, Blast_Score=131, Evalue=7e-31, Organism=Caenorhabditis elegans, GI193208216, Length=394, Percent_Identity=27.4111675126904, Blast_Score=128, Evalue=8e-30, Organism=Caenorhabditis elegans, GI71982862, Length=198, Percent_Identity=33.3333333333333, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17556951, Length=354, Percent_Identity=27.4011299435028, Blast_Score=114, Evalue=1e-25, Organism=Caenorhabditis elegans, GI25148205, Length=361, Percent_Identity=26.3157894736842, Blast_Score=105, Evalue=6e-23, Organism=Caenorhabditis elegans, GI25148291, Length=333, Percent_Identity=24.024024024024, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71997889, Length=346, Percent_Identity=23.9884393063584, Blast_Score=103, Evalue=2e-22, Organism=Caenorhabditis elegans, GI71987152, Length=91, Percent_Identity=39.5604395604396, Blast_Score=77, Evalue=2e-14, Organism=Caenorhabditis elegans, GI17557982, Length=377, Percent_Identity=23.0769230769231, Blast_Score=73, Evalue=4e-13, Organism=Saccharomyces cerevisiae, GI6320224, Length=364, Percent_Identity=33.7912087912088, Blast_Score=205, Evalue=1e-53, Organism=Saccharomyces cerevisiae, GI6321856, Length=418, Percent_Identity=32.5358851674641, Blast_Score=203, Evalue=4e-53, Organism=Saccharomyces cerevisiae, GI6324217, Length=353, Percent_Identity=32.8611898016997, Blast_Score=201, Evalue=2e-52, Organism=Saccharomyces cerevisiae, GI6325138, Length=372, Percent_Identity=33.0645161290323, Blast_Score=197, Evalue=4e-51, Organism=Saccharomyces cerevisiae, GI6324778, Length=366, Percent_Identity=32.7868852459016, Blast_Score=195, Evalue=1e-50, Organism=Saccharomyces cerevisiae, GI6320041, Length=359, Percent_Identity=30.6406685236769, Blast_Score=194, Evalue=3e-50, Organism=Saccharomyces cerevisiae, GI6321360, Length=343, Percent_Identity=35.2769679300292, Blast_Score=192, Evalue=7e-50, Organism=Saccharomyces cerevisiae, GI6320173, Length=413, Percent_Identity=30.2663438256659, Blast_Score=189, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6324620, Length=356, Percent_Identity=31.4606741573034, Blast_Score=188, Evalue=1e-48, Organism=Saccharomyces cerevisiae, GI6323021, Length=360, Percent_Identity=30.8333333333333, Blast_Score=179, Evalue=7e-46, Organism=Saccharomyces cerevisiae, GI6320119, Length=357, Percent_Identity=31.0924369747899, Blast_Score=177, Evalue=4e-45, Organism=Saccharomyces cerevisiae, GI6321963, Length=381, Percent_Identity=32.2834645669291, Blast_Score=172, Evalue=9e-44, Organism=Saccharomyces cerevisiae, GI6322427, Length=355, Percent_Identity=30.7042253521127, Blast_Score=168, Evalue=2e-42, Organism=Saccharomyces cerevisiae, GI6322912, Length=332, Percent_Identity=31.9277108433735, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6322323, Length=332, Percent_Identity=31.9277108433735, Blast_Score=165, Evalue=1e-41, Organism=Saccharomyces cerevisiae, GI6320449, Length=382, Percent_Identity=30.3664921465969, Blast_Score=160, Evalue=3e-40, Organism=Saccharomyces cerevisiae, GI6321111, Length=392, Percent_Identity=30.3571428571429, Blast_Score=160, Evalue=5e-40, Organism=Saccharomyces cerevisiae, GI6319714, Length=461, Percent_Identity=26.0303687635575, Blast_Score=154, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6319618, Length=418, Percent_Identity=29.9043062200957, Blast_Score=154, Evalue=4e-38, Organism=Saccharomyces cerevisiae, GI6320400, Length=377, Percent_Identity=29.973474801061, Blast_Score=150, Evalue=3e-37, Organism=Saccharomyces cerevisiae, GI6323947, Length=362, Percent_Identity=29.5580110497238, Blast_Score=149, Evalue=7e-37, Organism=Saccharomyces cerevisiae, GI6321267, Length=454, Percent_Identity=31.057268722467, Blast_Score=148, Evalue=2e-36, Organism=Saccharomyces cerevisiae, GI6322876, Length=437, Percent_Identity=26.7734553775744, Blast_Score=122, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6323306, Length=317, Percent_Identity=28.0757097791798, Blast_Score=121, Evalue=2e-28, Organism=Saccharomyces cerevisiae, GI6324366, Length=391, Percent_Identity=25.5754475703325, Blast_Score=102, Evalue=2e-22, Organism=Saccharomyces cerevisiae, GI6321374, Length=196, Percent_Identity=29.0816326530612, Blast_Score=67, Evalue=4e-12, Organism=Drosophila melanogaster, GI24645031, Length=358, Percent_Identity=32.6815642458101, Blast_Score=209, Evalue=3e-54, Organism=Drosophila melanogaster, GI24584399, Length=365, Percent_Identity=32.8767123287671, Blast_Score=202, Evalue=3e-52, Organism=Drosophila melanogaster, GI24583281, Length=359, Percent_Identity=30.6406685236769, Blast_Score=199, Evalue=3e-51, Organism=Drosophila melanogaster, GI24583279, Length=345, Percent_Identity=31.304347826087, Blast_Score=199, Evalue=4e-51, Organism=Drosophila melanogaster, GI28574962, Length=367, Percent_Identity=32.9700272479564, Blast_Score=194, Evalue=1e-49, Organism=Drosophila melanogaster, GI24644479, Length=361, Percent_Identity=31.5789473684211, Blast_Score=191, Evalue=6e-49, Organism=Drosophila melanogaster, GI24644483, Length=361, Percent_Identity=31.5789473684211, Blast_Score=191, Evalue=7e-49, Organism=Drosophila melanogaster, GI28575014, Length=360, Percent_Identity=31.6666666666667, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24644487, Length=361, Percent_Identity=31.5789473684211, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI45551833, Length=361, Percent_Identity=31.5789473684211, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24644485, Length=361, Percent_Identity=31.5789473684211, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI281361218, Length=361, Percent_Identity=31.5789473684211, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24644481, Length=361, Percent_Identity=31.5789473684211, Blast_Score=191, Evalue=9e-49, Organism=Drosophila melanogaster, GI24585582, Length=344, Percent_Identity=33.4302325581395, Blast_Score=191, Evalue=1e-48, Organism=Drosophila melanogaster, GI17136814, Length=476, Percent_Identity=30.8823529411765, Blast_Score=189, Evalue=2e-48, Organism=Drosophila melanogaster, GI17647335, Length=360, Percent_Identity=31.6666666666667, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI24642151, Length=373, Percent_Identity=31.0991957104558, Blast_Score=187, Evalue=1e-47, Organism=Drosophila melanogaster, GI17985987, Length=365, Percent_Identity=32.0547945205479, Blast_Score=186, Evalue=2e-47, Organism=Drosophila melanogaster, GI24584994, Length=382, Percent_Identity=30.8900523560209, Blast_Score=181, Evalue=1e-45, Organism=Drosophila melanogaster, GI24582080, Length=368, Percent_Identity=31.7934782608696, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582078, Length=368, Percent_Identity=31.7934782608696, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI17136248, Length=368, Percent_Identity=31.7934782608696, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI24582075, Length=368, Percent_Identity=31.7934782608696, Blast_Score=180, Evalue=2e-45, Organism=Drosophila melanogaster, GI21356161, Length=387, Percent_Identity=29.4573643410853, Blast_Score=179, Evalue=5e-45, Organism=Drosophila melanogaster, GI24581954, Length=375, Percent_Identity=29.6, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI24581952, Length=375, Percent_Identity=29.6, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI24581956, Length=375, Percent_Identity=29.6, Blast_Score=175, Evalue=6e-44, Organism=Drosophila melanogaster, GI24662330, Length=354, Percent_Identity=30.7909604519774, Blast_Score=174, Evalue=9e-44, Organism=Drosophila melanogaster, GI17977678, Length=367, Percent_Identity=31.3351498637602, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI21355075, Length=352, Percent_Identity=30.3977272727273, Blast_Score=174, Evalue=1e-43, Organism=Drosophila melanogaster, GI18857967, Length=381, Percent_Identity=30.7086614173228, Blast_Score=173, Evalue=2e-43, Organism=Drosophila melanogaster, GI24666101, Length=350, Percent_Identity=32.5714285714286, Blast_Score=167, Evalue=2e-41, Organism=Drosophila melanogaster, GI24642822, Length=378, Percent_Identity=30.6878306878307, Blast_Score=155, Evalue=4e-38, Organism=Drosophila melanogaster, GI281365720, Length=316, Percent_Identity=31.0126582278481, Blast_Score=148, Evalue=7e-36, Organism=Drosophila melanogaster, GI21355559, Length=372, Percent_Identity=27.4193548387097, Blast_Score=143, Evalue=3e-34, Organism=Drosophila melanogaster, GI28571808, Length=361, Percent_Identity=29.3628808864266, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI28571809, Length=361, Percent_Identity=29.3628808864266, Blast_Score=142, Evalue=5e-34, Organism=Drosophila melanogaster, GI24643725, Length=406, Percent_Identity=23.6453201970443, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI24668515, Length=370, Percent_Identity=27.027027027027, Blast_Score=124, Evalue=1e-28, Organism=Drosophila melanogaster, GI17136666, Length=408, Percent_Identity=25.9803921568627, Blast_Score=120, Evalue=2e-27, Organism=Drosophila melanogaster, GI19920478, Length=344, Percent_Identity=25.5813953488372, Blast_Score=110, Evalue=3e-24, Organism=Drosophila melanogaster, GI24640164, Length=348, Percent_Identity=20.6896551724138, Blast_Score=99, Evalue=6e-21, Organism=Drosophila melanogaster, GI20130173, Length=448, Percent_Identity=23.8839285714286, Blast_Score=90, Evalue=3e-18, Organism=Drosophila melanogaster, GI18859659, Length=217, Percent_Identity=29.9539170506912, Blast_Score=89, Evalue=7e-18, Organism=Drosophila melanogaster, GI28571338, Length=217, Percent_Identity=29.9539170506912, Blast_Score=89, Evalue=7e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014001 - InterPro: IPR011545 - InterPro: IPR001650 - InterPro: IPR014021 - InterPro: IPR014014 [H]
Pfam domain/function: PF00270 DEAD; PF00271 Helicase_C [H]
EC number: =3.6.4.13 [H]
Molecular weight: Translated: 51553; Mature: 51553
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNEFQKFNLKPFLMTALDEINFKTPTPVQDKVIPLIADGKSVVGQSQTGSGKTHAFLLPI CCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCEEEEEEH FNNIDPELNAIQAVITTPSRELAYQIYEDAKQLASASEVKIEIGNYVGGTDKKRQVEKLG HCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHC HHQPAIIIGTPGRVLDLLKERALNFRQVKYMVIDEADMTLDMGFLNAVDQIAAAMPSKLQ CCCCEEEEECCHHHHHHHHHHCCCHHHEEEEEEECCCCEEHHHHHHHHHHHHHHCCCCEE ILVFSATIPQRLNVFLKKYMDHPVIEEIPTETTISPTIKNILISTKSSGKNNLIYKLLTM EEEEECCCHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHEEECCCCCCCCEEEEEECC GEPYLALVFTNTKERADELTDYLKAQGLDVAKIHGGIQPRERKRIMKDIHRLRYQYVVAT CCCEEEEEEECCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHEEH DLAARGIDIDGVSLVINDDIPTDLEFFIHRVGRTGRNGMSGTAITLYMPNEEDKVADVEK HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHH MGITFLPQQIRNNELVDTYDRDRRQTRRLSQKKLDPTMIGMVKKKKKKVKPGYKRRIRKA CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH ISEKEIRDRRMEQHQAVREAKKAKIKQSRNKRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNEFQKFNLKPFLMTALDEINFKTPTPVQDKVIPLIADGKSVVGQSQTGSGKTHAFLLPI CCCCHHCCCCHHHHHHHHHCCCCCCCCCCCCEEEEEECCHHHCCCCCCCCCCCEEEEEEH FNNIDPELNAIQAVITTPSRELAYQIYEDAKQLASASEVKIEIGNYVGGTDKKRQVEKLG HCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHHHHC HHQPAIIIGTPGRVLDLLKERALNFRQVKYMVIDEADMTLDMGFLNAVDQIAAAMPSKLQ CCCCEEEEECCHHHHHHHHHHCCCHHHEEEEEEECCCCEEHHHHHHHHHHHHHHCCCCEE ILVFSATIPQRLNVFLKKYMDHPVIEEIPTETTISPTIKNILISTKSSGKNNLIYKLLTM EEEEECCCHHHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHEEECCCCCCCCEEEEEECC GEPYLALVFTNTKERADELTDYLKAQGLDVAKIHGGIQPRERKRIMKDIHRLRYQYVVAT CCCEEEEEEECCHHHHHHHHHHHHHCCCCCHHHCCCCCHHHHHHHHHHHHHHHHHHHEEH DLAARGIDIDGVSLVINDDIPTDLEFFIHRVGRTGRNGMSGTAITLYMPNEEDKVADVEK HHHHCCCCCCCEEEEECCCCCCHHHHHHHHHCCCCCCCCCCCEEEEEECCCCCHHHHHHH MGITFLPQQIRNNELVDTYDRDRRQTRRLSQKKLDPTMIGMVKKKKKKVKPGYKRRIRKA CCCCCCHHHHCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHH ISEKEIRDRRMEQHQAVREAKKAKIKQSRNKRR HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]