Click here to switch to the map view.

The map label for this gene is 116492996

Identifier: 116492996

GI number: 116492996

Start: 1234221

End: 1234964

Strand: Reverse

Name: 116492996

Synonym: PEPE_1248

Alternate gene names: NA

Gene position: 1234964-1234221 (Counterclockwise)

Preceding gene: 116492998

Following gene: 116492994

Centisome position: 67.4

GC content: 34.54

Gene sequence:

>744_bases
ATGATTATTTGTGGGTTATTACTATTTTTAACTTTCTCAGCTAAACAAACCGTCTTTAATGTAAACTATGTTCAAAGTCA
GGTGGTTAAATCGAATGCGGCTAGTACAATTAATCAGCAAGTTAATACACAATTGCAACAAGCAGGGATTCAACAGACTA
ATTTGATCCCTGATAATGTAATTAATGATGAATTGAAGTCAATGATTGGTGAATTTTATGCTGGTGAGGAAGTCAAGTTA
GATCAATCAATCATTACGGAAGAAGTTAATGCAAATATTGGCACGTCCGGAATGATACAACAAGGGATAGTTTCGATTAT
TGTTAATCAAGTTGCTAATATTTTTAATAGCCAGTTGGATACGCAAAAACTAACGCATTATGCGGGACAGGTAGCTAAAT
TACAAAAGTTGAATCAAATCATGATGGCGATTAGTGCAGTAGGACTGCTGATACTAACATTCTTTGCTTTCATTAAACGA
CGCGGTCTCAATTTATTAGGTTCCATGATGGTGACGGTTGGGGCATTTGCTACTGTGATTAGTGCCATCGCCTATGTATC
AAATGTTCTTAATGATTTGCCAATCCAATATGCTGTAATTAAAGGGATTGTTGAGCAAGCAGGACAAGATATTTTATTAC
GTGAGTTAACTATGGCACTTGGTATTTTAATATTAGGAATCATTTTATTGGTGTTGTCTTTTGGGGCTAATCAGGTCAAT
AAAAAAAGAAGTAAAAATCGTTAA

Upstream 100 bases:

>100_bases
AGTGGTCCCAATCGAAGAAACAAGGATGACAAGAGAAACGCTTCAGGAAAAAAATCCGACAATTGACAGAAAACCAAGGC
TGTTTTGGATAAGAGTCTTG

Downstream 100 bases:

>100_bases
TGATTTTTACTTCTTTTTTTATTTTAGTCTGACCACATATCATTTAAGACGATGGTTTGTTCACGATCAGGGCCGATTGA
AAAGGCGCTAACTGGAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 247; Mature: 247

Protein sequence:

>247_residues
MIICGLLLFLTFSAKQTVFNVNYVQSQVVKSNAASTINQQVNTQLQQAGIQQTNLIPDNVINDELKSMIGEFYAGEEVKL
DQSIITEEVNANIGTSGMIQQGIVSIIVNQVANIFNSQLDTQKLTHYAGQVAKLQKLNQIMMAISAVGLLILTFFAFIKR
RGLNLLGSMMVTVGAFATVISAIAYVSNVLNDLPIQYAVIKGIVEQAGQDILLRELTMALGILILGIILLVLSFGANQVN
KKRSKNR

Sequences:

>Translated_247_residues
MIICGLLLFLTFSAKQTVFNVNYVQSQVVKSNAASTINQQVNTQLQQAGIQQTNLIPDNVINDELKSMIGEFYAGEEVKL
DQSIITEEVNANIGTSGMIQQGIVSIIVNQVANIFNSQLDTQKLTHYAGQVAKLQKLNQIMMAISAVGLLILTFFAFIKR
RGLNLLGSMMVTVGAFATVISAIAYVSNVLNDLPIQYAVIKGIVEQAGQDILLRELTMALGILILGIILLVLSFGANQVN
KKRSKNR
>Mature_247_residues
MIICGLLLFLTFSAKQTVFNVNYVQSQVVKSNAASTINQQVNTQLQQAGIQQTNLIPDNVINDELKSMIGEFYAGEEVKL
DQSIITEEVNANIGTSGMIQQGIVSIIVNQVANIFNSQLDTQKLTHYAGQVAKLQKLNQIMMAISAVGLLILTFFAFIKR
RGLNLLGSMMVTVGAFATVISAIAYVSNVLNDLPIQYAVIKGIVEQAGQDILLRELTMALGILILGIILLVLSFGANQVN
KKRSKNR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26917; Mature: 26917

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIICGLLLFLTFSAKQTVFNVNYVQSQVVKSNAASTINQQVNTQLQQAGIQQTNLIPDNV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHH
INDELKSMIGEFYAGEEVKLDQSIITEEVNANIGTSGMIQQGIVSIIVNQVANIFNSQLD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TQKLTHYAGQVAKLQKLNQIMMAISAVGLLILTFFAFIKRRGLNLLGSMMVTVGAFATVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIAYVSNVLNDLPIQYAVIKGIVEQAGQDILLRELTMALGILILGIILLVLSFGANQVN
HHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KKRSKNR
HHHCCCC
>Mature Secondary Structure
MIICGLLLFLTFSAKQTVFNVNYVQSQVVKSNAASTINQQVNTQLQQAGIQQTNLIPDNV
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCCCCHHH
INDELKSMIGEFYAGEEVKLDQSIITEEVNANIGTSGMIQQGIVSIIVNQVANIFNSQLD
HHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
TQKLTHYAGQVAKLQKLNQIMMAISAVGLLILTFFAFIKRRGLNLLGSMMVTVGAFATVI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAIAYVSNVLNDLPIQYAVIKGIVEQAGQDILLRELTMALGILILGIILLVLSFGANQVN
HHHHHHHHHHHHCCHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHH
KKRSKNR
HHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA