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The map label for this gene is comGB [H]

Identifier: 116492985

GI number: 116492985

Start: 1223634

End: 1224644

Strand: Reverse

Name: comGB [H]

Synonym: PEPE_1237

Alternate gene names: 116492985

Gene position: 1224644-1223634 (Counterclockwise)

Preceding gene: 116492986

Following gene: 116492984

Centisome position: 66.83

GC content: 33.23

Gene sequence:

>1011_bases
TTGAAGATTTCCAATACGGATAGAATCCAATTAAATGATCAAGCGTTTATTTTTTCAACTATGGTTGATTTAATGAAAAT
GGGCGTTTCGATTCGCAAGAGTGTGGAACTTGTTCGAATTATGCGTCCAGCGATTGCTAAACCCATGGAAAAGGTGATTA
ATCAGTTGCAGCGTGGTAAATCATTTTCAACAGCTTTTGGTCCGTATGTAAGTACTAATATCTATTATCAATTAGAAATT
GCCGATCAACACGGCGGATTAGAGCAAACCTTGGAAACCATCGCTAAAATTTTTACTAGTCAAAGTCAGCAACGTAAGAA
GTTAAAGTCGTTAATTCAATATCCCGTTTTTTTAATGGCATTCTTGGGAATAATGATGCTAGGGATGCGAATTTATATTA
TGCCTGAACTGGCTAATTGGAATACGGGGACAGCAAGTGTTCAAAGTCAAGTGATTAAATTGGTAATAATTGGTATGTTA
TTTGGAATTATAGTAGGAATATTATATTTATGGTTAAAATTTAAAAAGAAAAGTATGGCTAATCAAGTCGCTTTACTATG
TAGAATACCAATCTTTGGCCAGTTGTATCAAACATATTGTCATTACTACTTAACAGCAAATTTATCATTTTTTATTAGTA
GCGGTATGTCAATGGGAAGTGTTTGTAAGTATTTAACCCTTTTAGATTCCCAGTCTTTACTTCATCAAATTGGCCGACGG
GTCGAAAAAAGCATGGCTAGTGGTCAAGATATTAGTTCGGTAATAAAGAAATCGGTTTATTTACCAATTGAGCTAGACTT
ATTGCTGCGTAAAGGGAGTAAAAAAGAAACATTATCAAAAGAAGTGCATGCATTATCAATGATTAAATACAAAACTTTGA
TTCAAAAAATTGAACGAATGATTTTAATTGTCCAGCCAATCTTGTTTGGCATAATCGGAATTGTCATTGTTTTGATGTAC
ATGAATCTTTTAATGCCAATGTATAACTCAATGAAGGAAGTGTCAAAATGA

Upstream 100 bases:

>100_bases
GAAATTAAATCATTCCATCCGGCCCTGAAAGGAACAAAGAAGAAGTGGAGAGAACGACTAGAGGAGTGGAAGGAAAGTGG
CCAAATTACTAAAGAAGTAT

Downstream 100 bases:

>100_bases
AAGCGAAAATAAAAAAAGGTTTTACTTTGATTGAAATGACCATCGTCTTATTTATTATTTCATTATTAATTTTAATTATT
CTACCCAATGTCACTAGTCA

Product: Type II secretory pathway/competence component

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 336; Mature: 336

Protein sequence:

>336_residues
MKISNTDRIQLNDQAFIFSTMVDLMKMGVSIRKSVELVRIMRPAIAKPMEKVINQLQRGKSFSTAFGPYVSTNIYYQLEI
ADQHGGLEQTLETIAKIFTSQSQQRKKLKSLIQYPVFLMAFLGIMMLGMRIYIMPELANWNTGTASVQSQVIKLVIIGML
FGIIVGILYLWLKFKKKSMANQVALLCRIPIFGQLYQTYCHYYLTANLSFFISSGMSMGSVCKYLTLLDSQSLLHQIGRR
VEKSMASGQDISSVIKKSVYLPIELDLLLRKGSKKETLSKEVHALSMIKYKTLIQKIERMILIVQPILFGIIGIVIVLMY
MNLLMPMYNSMKEVSK

Sequences:

>Translated_336_residues
MKISNTDRIQLNDQAFIFSTMVDLMKMGVSIRKSVELVRIMRPAIAKPMEKVINQLQRGKSFSTAFGPYVSTNIYYQLEI
ADQHGGLEQTLETIAKIFTSQSQQRKKLKSLIQYPVFLMAFLGIMMLGMRIYIMPELANWNTGTASVQSQVIKLVIIGML
FGIIVGILYLWLKFKKKSMANQVALLCRIPIFGQLYQTYCHYYLTANLSFFISSGMSMGSVCKYLTLLDSQSLLHQIGRR
VEKSMASGQDISSVIKKSVYLPIELDLLLRKGSKKETLSKEVHALSMIKYKTLIQKIERMILIVQPILFGIIGIVIVLMY
MNLLMPMYNSMKEVSK
>Mature_336_residues
MKISNTDRIQLNDQAFIFSTMVDLMKMGVSIRKSVELVRIMRPAIAKPMEKVINQLQRGKSFSTAFGPYVSTNIYYQLEI
ADQHGGLEQTLETIAKIFTSQSQQRKKLKSLIQYPVFLMAFLGIMMLGMRIYIMPELANWNTGTASVQSQVIKLVIIGML
FGIIVGILYLWLKFKKKSMANQVALLCRIPIFGQLYQTYCHYYLTANLSFFISSGMSMGSVCKYLTLLDSQSLLHQIGRR
VEKSMASGQDISSVIKKSVYLPIELDLLLRKGSKKETLSKEVHALSMIKYKTLIQKIERMILIVQPILFGIIGIVIVLMY
MNLLMPMYNSMKEVSK

Specific function: Required for transformation and DNA binding [H]

COG id: COG1459

COG function: function code NU; Type II secretory pathway, component PulF

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the GSP F family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018076
- InterPro:   IPR001992 [H]

Pfam domain/function: PF00482 GSPII_F [H]

EC number: NA

Molecular weight: Translated: 38280; Mature: 38280

Theoretical pI: Translated: 10.35; Mature: 10.35

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
6.8 %Met     (Translated Protein)
7.7 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
6.8 %Met     (Mature Protein)
7.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKISNTDRIQLNDQAFIFSTMVDLMKMGVSIRKSVELVRIMRPAIAKPMEKVINQLQRGK
CCCCCCCCEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SFSTAFGPYVSTNIYYQLEIADQHGGLEQTLETIAKIFTSQSQQRKKLKSLIQYPVFLMA
CCCHHCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FLGIMMLGMRIYIMPELANWNTGTASVQSQVIKLVIIGMLFGIIVGILYLWLKFKKKSMA
HHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQVALLCRIPIFGQLYQTYCHYYLTANLSFFISSGMSMGSVCKYLTLLDSQSLLHQIGRR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
VEKSMASGQDISSVIKKSVYLPIELDLLLRKGSKKETLSKEVHALSMIKYKTLIQKIERM
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIVQPILFGIIGIVIVLMYMNLLMPMYNSMKEVSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKISNTDRIQLNDQAFIFSTMVDLMKMGVSIRKSVELVRIMRPAIAKPMEKVINQLQRGK
CCCCCCCCEEECCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
SFSTAFGPYVSTNIYYQLEIADQHGGLEQTLETIAKIFTSQSQQRKKLKSLIQYPVFLMA
CCCHHCCCCEECCEEEEEEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHH
FLGIMMLGMRIYIMPELANWNTGTASVQSQVIKLVIIGMLFGIIVGILYLWLKFKKKSMA
HHHHHHHHHHHHEEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
NQVALLCRIPIFGQLYQTYCHYYLTANLSFFISSGMSMGSVCKYLTLLDSQSLLHQIGRR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCHHHHHHHHHH
VEKSMASGQDISSVIKKSVYLPIELDLLLRKGSKKETLSKEVHALSMIKYKTLIQKIERM
HHHHHHCCCHHHHHHHHHCCCCCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
ILIVQPILFGIIGIVIVLMYMNLLMPMYNSMKEVSK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 2507524; 8969508; 9384377; 9422590 [H]