Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492981

Identifier: 116492981

GI number: 116492981

Start: 1222315

End: 1222749

Strand: Reverse

Name: 116492981

Synonym: PEPE_1233

Alternate gene names: NA

Gene position: 1222749-1222315 (Counterclockwise)

Preceding gene: 116492982

Following gene: 116492980

Centisome position: 66.73

GC content: 30.34

Gene sequence:

>435_bases
ATGAAATTAGACAAAAGTTATAAAAAGAGTGGTTTTACATTAATGGAAGCTGTATTAGCAATGATGATAATGTTTTTAAT
TGTTAATTTAGCAGTACTTTTAATTAAAAGTGCTCAAAATAAGGCTCAACAAAATTTTAATATGAAGATTACAGAGGTGG
TCCAAGACTTGGAGTCACCAAAGCATGCTTTTGAATTGGTTGAAGTTAGAAGTGACCAATTAACTCTATATTCCAAAACT
GAAGAGAAACGTTATTATCTAGGAAGTTATGTCAATCATGATATGTTGAGATATACACCTGGACATATGCCACTAGTTTT
GGGTGTGCAACACGTATTTTTTAAAAAAGAAAGAAATTTAATCCAAATTAAATTAGTTTCAAATGGAAAGAAGAGTATCT
CATATGTATATATCCCGCCTCAAAAAAAGCGGTAG

Upstream 100 bases:

>100_bases
TTAGGAGGCTTTGGCACAGTTATATTGAATTCATGGCATATGTGGAACGATAAAATAAATAGAGAACAGATTGAACTAAG
TTATGAGCGGACAATATTAA

Downstream 100 bases:

>100_bases
TGCAATGATTACGGCGTTATTTGTTTTATCTTTTTTATCTGGAATTAGTCTCTTGATTGGTGAGCAAGCGCGGCAAGTAA
TACTGAGGTTAAAAGATGAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 144; Mature: 144

Protein sequence:

>144_residues
MKLDKSYKKSGFTLMEAVLAMMIMFLIVNLAVLLIKSAQNKAQQNFNMKITEVVQDLESPKHAFELVEVRSDQLTLYSKT
EEKRYYLGSYVNHDMLRYTPGHMPLVLGVQHVFFKKERNLIQIKLVSNGKKSISYVYIPPQKKR

Sequences:

>Translated_144_residues
MKLDKSYKKSGFTLMEAVLAMMIMFLIVNLAVLLIKSAQNKAQQNFNMKITEVVQDLESPKHAFELVEVRSDQLTLYSKT
EEKRYYLGSYVNHDMLRYTPGHMPLVLGVQHVFFKKERNLIQIKLVSNGKKSISYVYIPPQKKR
>Mature_144_residues
MKLDKSYKKSGFTLMEAVLAMMIMFLIVNLAVLLIKSAQNKAQQNFNMKITEVVQDLESPKHAFELVEVRSDQLTLYSKT
EEKRYYLGSYVNHDMLRYTPGHMPLVLGVQHVFFKKERNLIQIKLVSNGKKSISYVYIPPQKKR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16773; Mature: 16773

Theoretical pI: Translated: 10.30; Mature: 10.30

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
5.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLDKSYKKSGFTLMEAVLAMMIMFLIVNLAVLLIKSAQNKAQQNFNMKITEVVQDLESP
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
KHAFELVEVRSDQLTLYSKTEEKRYYLGSYVNHDMLRYTPGHMPLVLGVQHVFFKKERNL
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCE
IQIKLVSNGKKSISYVYIPPQKKR
EEEEEECCCCCCEEEEEECCCCCC
>Mature Secondary Structure
MKLDKSYKKSGFTLMEAVLAMMIMFLIVNLAVLLIKSAQNKAQQNFNMKITEVVQDLESP
CCCCCCHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCH
KHAFELVEVRSDQLTLYSKTEEKRYYLGSYVNHDMLRYTPGHMPLVLGVQHVFFKKERNL
HHHHHHHHHCCCCEEEEECCCCHHHHHHHHCCCCCEEECCCCCHHHHHHHHHHHHCCCCE
IQIKLVSNGKKSISYVYIPPQKKR
EEEEEECCCCCCEEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA