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The map label for this gene is 116492974

Identifier: 116492974

GI number: 116492974

Start: 1216956

End: 1217582

Strand: Reverse

Name: 116492974

Synonym: PEPE_1226

Alternate gene names: NA

Gene position: 1217582-1216956 (Counterclockwise)

Preceding gene: 116492975

Following gene: 116492972

Centisome position: 66.45

GC content: 29.67

Gene sequence:

>627_bases
ATGGCAATAGGATTTTGGAAAAGATTATTATATAGCTTGCTATTGGATATAGCAGGATTAAGTAGTGCTATTTTTCTGAC
AATTAATTCTATTTTTTTGTTTAGGTTCACTATCAATGCGCATCTAACTAAACTGGTAGGGATGTCTACAAATAAAATTA
TGGTTAATTATTACCAATTGATTGCATATCTAGAGCTTCCATGGGTCCATAGATTAAAACTCGATGATTTTCCCTTTTCT
GAACATGGTTTAGTTCATATGGCGGAAGTGAAAAATTTATTTATGCTAAATACGATTGTAATGGTATTTTCTATTTGTAT
GGTAATAATTCTATATCGTTATATTGCTAAAAATAAGAAGTGGTGGGAATTAATTGGCGGATTACAAAACTCGATGATAT
TGGTCCCTTTAGTAGTCATTTTTATAAGCTTAGATTTTGACCATTGGTTTGTTCTCTTTCATCAGGCATTTTTTAATAAC
AATTATTGGATTTTTAATCCCGTTACAGACCCAATTATTAATGTTTTAACAGATAACTTTTTTACAATTTGTTTTGTTTT
CTTGTTCGGTTTATTGGAGTTATATTTAGCCATTTCATTTTGGGTAGTAAAAAAGCAGGTCAACTAG

Upstream 100 bases:

>100_bases
TTGGGATTGATACTTTGCTTGTCTATACGGGAGTTTCAACTAAAGAGCTCGTTGCAAAACAAGACATTAAACCTACTCAT
GAAGTTGATAGTTTTGATGA

Downstream 100 bases:

>100_bases
ACCTGCTTTTTTATTTTTGATTTGGCAAAGGAAACAATAGCTGGAATTAGGGAAACCACAATGATTCCGATTACTACGAG
TGAGAAATGCTCTTTTACAA

Product: hypothetical protein

Products: NA

Alternate protein names: Rhodopsin-Like GPCR Superfamily Membrane Protein; Integral Membrane Protein TIGR

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAIGFWKRLLYSLLLDIAGLSSAIFLTINSIFLFRFTINAHLTKLVGMSTNKIMVNYYQLIAYLELPWVHRLKLDDFPFS
EHGLVHMAEVKNLFMLNTIVMVFSICMVIILYRYIAKNKKWWELIGGLQNSMILVPLVVIFISLDFDHWFVLFHQAFFNN
NYWIFNPVTDPIINVLTDNFFTICFVFLFGLLELYLAISFWVVKKQVN

Sequences:

>Translated_208_residues
MAIGFWKRLLYSLLLDIAGLSSAIFLTINSIFLFRFTINAHLTKLVGMSTNKIMVNYYQLIAYLELPWVHRLKLDDFPFS
EHGLVHMAEVKNLFMLNTIVMVFSICMVIILYRYIAKNKKWWELIGGLQNSMILVPLVVIFISLDFDHWFVLFHQAFFNN
NYWIFNPVTDPIINVLTDNFFTICFVFLFGLLELYLAISFWVVKKQVN
>Mature_207_residues
AIGFWKRLLYSLLLDIAGLSSAIFLTINSIFLFRFTINAHLTKLVGMSTNKIMVNYYQLIAYLELPWVHRLKLDDFPFSE
HGLVHMAEVKNLFMLNTIVMVFSICMVIILYRYIAKNKKWWELIGGLQNSMILVPLVVIFISLDFDHWFVLFHQAFFNNN
YWIFNPVTDPIINVLTDNFFTICFVFLFGLLELYLAISFWVVKKQVN

Specific function: Unknown

COG id: COG4478

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24512; Mature: 24380

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAIGFWKRLLYSLLLDIAGLSSAIFLTINSIFLFRFTINAHLTKLVGMSTNKIMVNYYQL
CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCHHHHHHHHH
IAYLELPWVHRLKLDDFPFSEHGLVHMAEVKNLFMLNTIVMVFSICMVIILYRYIAKNKK
HHHHHCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WWELIGGLQNSMILVPLVVIFISLDFDHWFVLFHQAFFNNNYWIFNPVTDPIINVLTDNF
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH
FTICFVFLFGLLELYLAISFWVVKKQVN
HHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
AIGFWKRLLYSLLLDIAGLSSAIFLTINSIFLFRFTINAHLTKLVGMSTNKIMVNYYQL
CHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEEEHHHHHHHHHCCCCCHHHHHHHHH
IAYLELPWVHRLKLDDFPFSEHGLVHMAEVKNLFMLNTIVMVFSICMVIILYRYIAKNKK
HHHHHCCCCEEEECCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCH
WWELIGGLQNSMILVPLVVIFISLDFDHWFVLFHQAFFNNNYWIFNPVTDPIINVLTDNF
HHHHHCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCEEECCCHHHHHHHHHHHH
FTICFVFLFGLLELYLAISFWVVKKQVN
HHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA