| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492803
Identifier: 116492803
GI number: 116492803
Start: 1031855
End: 1032217
Strand: Direct
Name: 116492803
Synonym: PEPE_1040
Alternate gene names: NA
Gene position: 1031855-1032217 (Clockwise)
Preceding gene: 116492801
Following gene: 116492807
Centisome position: 56.31
GC content: 37.74
Gene sequence:
>363_bases ATGCGATTATGGCATGAAAAGTTAATTTCTAAACTACCACGTGCCCAGCTTTTAGGACAGCATCGAGAAATTGCAGCCTT ACGAGGTAACGGTTGGGGTAAAAAACATGCAACCGTTGATTATGTTTTTACTCATTCTCCTTACAAACTTTATCAATTTC ATCGATTAGTATTAGCTGAGATGCAGTCACGAGGTTATCATCCTAACCCTAAATGGTTTGAACCAACTTTCCGTGGTTTC CATTGTCCGCCTTATTTAGAATTATGTGCTTGCCCACTAACTTCCCCAATCTATCCAGAACATGATCAACAGTATTTAAT TGAATGTCTGGAAAATTTAGAGTCTAAAGGAGTTCGATTATAA
Upstream 100 bases:
>100_bases TTTAACTCAGAGGTATGTTAGTGAGAATTCATCAGTCAAGTTAGTGTTAATTATCTTTAAATTACGCTATGCTTAAATTA AAAAACGGGGGGTCGTCTGT
Downstream 100 bases:
>100_bases GCCAAACACCCGACGGGTTCTAATAATATATTTATAATAAAAGGCCAATTCTTACGAATTGGTCTTTTTAAGAATTATCT TTTAATTACATATTCGTTCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 120; Mature: 120
Protein sequence:
>120_residues MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAEMQSRGYHPNPKWFEPTFRGF HCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL
Sequences:
>Translated_120_residues MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAEMQSRGYHPNPKWFEPTFRGF HCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL >Mature_120_residues MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAEMQSRGYHPNPKWFEPTFRGF HCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14174; Mature: 14174
Theoretical pI: Translated: 8.90; Mature: 8.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 5.0 %Cys+Met (Translated Protein) 3.3 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 5.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAE CCHHHHHHHHHCCHHHHHCCHHHHEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH MQSRGYHPNPKWFEPTFRGFHCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC >Mature Secondary Structure MRLWHEKLISKLPRAQLLGQHREIAALRGNGWGKKHATVDYVFTHSPYKLYQFHRLVLAE CCHHHHHHHHHCCHHHHHCCHHHHEEECCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHH MQSRGYHPNPKWFEPTFRGFHCPPYLELCACPLTSPIYPEHDQQYLIECLENLESKGVRL HHHCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA