Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492713

Identifier: 116492713

GI number: 116492713

Start: 951211

End: 951567

Strand: Direct

Name: 116492713

Synonym: PEPE_0950

Alternate gene names: NA

Gene position: 951211-951567 (Clockwise)

Preceding gene: 116492711

Following gene: 116492715

Centisome position: 51.91

GC content: 28.01

Gene sequence:

>357_bases
ATGTCAACATTAATGTTTGTACATGTTATATTATGGATTTTAATTGGATTAATTTGTACATATGGAATTACAATTGATCA
ATTTCACCAAACACTGATTGCACAGTATTGTGCAAGAATATTGGATATCGCACTTATTATAACGGGATTAGTGAATGTTG
TTCATACAGTTGCAATGTCACCATTGCTAGTCTGGATTCAATTTATTCTAGAAATTATCACAATCGGACTACTTGATTTT
ACACTTATTAGCAAAAGAAATAAAAAGAATGTTAAACCTAAGTCTATAATGCTATTTGTTTTAGTTTTTGCTGTTACTAC
TATTTTAGGTACTGTAATTCAATATTTGTTTGGTTAA

Upstream 100 bases:

>100_bases
TAAGATTTCAGTATTATTACATTTAGGAAGTGACGTTAATATAGTGTTTGCAGTTATGCTAAACTGTTTTTAGCAGTTTA
AATTAAAAGGAGCTACTTTA

Downstream 100 bases:

>100_bases
TCTAAAATAAAAGCCTTCTTAAACCAGTTTTAAATCTGGTTTAAGAAGGCTTTTTTGATAAATAAGATATAAAACTACCT
AAGAAATATGTTGGTGATTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 118; Mature: 117

Protein sequence:

>118_residues
MSTLMFVHVILWILIGLICTYGITIDQFHQTLIAQYCARILDIALIITGLVNVVHTVAMSPLLVWIQFILEIITIGLLDF
TLISKRNKKNVKPKSIMLFVLVFAVTTILGTVIQYLFG

Sequences:

>Translated_118_residues
MSTLMFVHVILWILIGLICTYGITIDQFHQTLIAQYCARILDIALIITGLVNVVHTVAMSPLLVWIQFILEIITIGLLDF
TLISKRNKKNVKPKSIMLFVLVFAVTTILGTVIQYLFG
>Mature_117_residues
STLMFVHVILWILIGLICTYGITIDQFHQTLIAQYCARILDIALIITGLVNVVHTVAMSPLLVWIQFILEIITIGLLDFT
LISKRNKKNVKPKSIMLFVLVFAVTTILGTVIQYLFG

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 13306; Mature: 13174

Theoretical pI: Translated: 9.24; Mature: 9.24

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
5.1 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSTLMFVHVILWILIGLICTYGITIDQFHQTLIAQYCARILDIALIITGLVNVVHTVAMS
CHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLVWIQFILEIITIGLLDFTLISKRNKKNVKPKSIMLFVLVFAVTTILGTVIQYLFG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC
>Mature Secondary Structure 
STLMFVHVILWILIGLICTYGITIDQFHQTLIAQYCARILDIALIITGLVNVVHTVAMS
HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
PLLVWIQFILEIITIGLLDFTLISKRNKKNVKPKSIMLFVLVFAVTTILGTVIQYLFG
HHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA