| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is fhs
Identifier: 116492703
GI number: 116492703
Start: 939717
End: 941378
Strand: Direct
Name: fhs
Synonym: PEPE_0939
Alternate gene names: 116492703
Gene position: 939717-941378 (Clockwise)
Preceding gene: 116492702
Following gene: 116492704
Centisome position: 51.28
GC content: 40.31
Gene sequence:
>1662_bases ATGAATGATATTGAAATTTCCCAGAATGCTGAAATGTTACCAATTCAAACAATTGCTAAACAAGCCGGATTTGATGAAAA GGTAGTCGAACCTTATGGTCATTACAAGGCCAAAATTGATATTTTTTCCGAGAAACCAAATACGCAACTTGGAAAATTGG TTCTGGTCACCTCGATTAATCCAACGCCCGCTGGAGAAGGTAAATCGACCGTAACCGTTGGATTAGGTGATGCTTTAAAT GACTTGACGGGGTCAGCAATGATTGCCTTACGTGAACCCTCCCAAGGTCCCGTTATGGGTATGAAAGGTGGTGCCACCGG CGGAGGTTACTCCCAAGTAATTCCGATGGACGACATCAATTTGCATTTTACTGGTGATATGCATGCTTTGACTGCAGCTA ATAATACTTTAGCAGCTTTGATTGACAATCATCTTCAGCAAGGAAATGAACTCAATATCGATCCTCGAACCATCGTTTGG CGTCGCTGTTTAGACATTAATGACCGCGCACTACGTAATATAGTTATTGGATTGGGAGGGCGCTTTAGTGGTGTGCCTCG AGAAGATAAATTTGACATTACCGTAGCCAGCGAACTAATGGCTATCTTGTGCCTAGCCCAAGATTTAAAGGATTTAAAGG AACGGATTAACCGTATTTTGATTGCTAATAACTATGATGGTCAACCCATCTTTGTTAAAGACCTACACGTTGGTGGCGCC ATTGCTACGTTGCTAAAAGATGCGATTAAGCCTAATTTAGTGCAAACCCTTGGTCATACTCCCGCCATAATTCATGGTGG ACCTTTTGCTAATATTGCTCATGGGTGCAACAGTGTTTTAGCCACGAAAACTGCTTTACGACATGCAAAATATACTGTAA CTGAAGCTGGTTTTGGAGCTGATTTGGGAGCTGAAAAATTCCTCGATATCAAAACCCCTGTCCTGGGAAAGCAACCTGAT GCAATTGTAATTGTGGCAACGGTACGAGCCTTAAAATACAATGGCGGAGCTAAACTAGCTGATTTAAAAATTGAAGATGT GGAAGCTCTCCAAAAAGGTTACATTAATTTACAACGTCATATCAAAAATATGCAACGTTATAACATCCCTGTAACTGTTT CAATTAATCATTTTATTAGTGATACAGACCAAGAGGTTAACACGCTAGTTAAGTTGATTGAAGCGGAAGGTATATCTGCA ATTGTTACCGATGCGTGGGCCAAGGGTGGTGCAGGTTCTAAAGATTTAGCCAATGAAGTGATTGCCTTGGCTGATACTAA TCAGGGACCAATGACTAAGTTATACGATAACAATGGCCGAATCGAAGACAAAATTAAAACAATTGTTCAAAAAATATATG GTGGTAGTGATGTAGAATATTCACCACAAGCACTTAAGAAAATTAAAGAATGTGTAGCAAATGGTTGGGATCATCTCCCA ATTTGTATGGCAAAATCCCAGTATTCATTTTCAGATGATCCTAAACAGTTAGGAGCACCAAGTGACTTTGTTATGCATGT TAACGATATTAACATTCGACTAGGAGCAGGATTCTTAGTCGTTCAAACTGGTAAGGTGCTTACTATGCCAGGACTTCCCA AGCATCCTGCCGCATTAGATATCGACATCGATAGTAAAGGAGAAATTACCGGATTATTCTAG
Upstream 100 bases:
>100_bases CTAAGTTTTGACTATGGCAATAAAAGATATAAACTATTAATGAGTCGTAAGTCATCAGATAAATTATTTAAAGCTTTGAC AAAAAAGGGGTAGAAGATTA
Downstream 100 bases:
>100_bases TAATTAAAGTTTTATGAAATGGTTTAGTTATATAGTTGGTTTATTACTTTTAGTAATTGATCAGCTGGTAAAAAGCGCTG TTAGTAATCAGATTGCTTTA
Product: formate-tetrahydrofolate ligase
Products: NA
Alternate protein names: Formyltetrahydrofolate synthetase; FHS; FTHFS
Number of amino acids: Translated: 553; Mature: 553
Protein sequence:
>553_residues MNDIEISQNAEMLPIQTIAKQAGFDEKVVEPYGHYKAKIDIFSEKPNTQLGKLVLVTSINPTPAGEGKSTVTVGLGDALN DLTGSAMIALREPSQGPVMGMKGGATGGGYSQVIPMDDINLHFTGDMHALTAANNTLAALIDNHLQQGNELNIDPRTIVW RRCLDINDRALRNIVIGLGGRFSGVPREDKFDITVASELMAILCLAQDLKDLKERINRILIANNYDGQPIFVKDLHVGGA IATLLKDAIKPNLVQTLGHTPAIIHGGPFANIAHGCNSVLATKTALRHAKYTVTEAGFGADLGAEKFLDIKTPVLGKQPD AIVIVATVRALKYNGGAKLADLKIEDVEALQKGYINLQRHIKNMQRYNIPVTVSINHFISDTDQEVNTLVKLIEAEGISA IVTDAWAKGGAGSKDLANEVIALADTNQGPMTKLYDNNGRIEDKIKTIVQKIYGGSDVEYSPQALKKIKECVANGWDHLP ICMAKSQYSFSDDPKQLGAPSDFVMHVNDINIRLGAGFLVVQTGKVLTMPGLPKHPAALDIDIDSKGEITGLF
Sequences:
>Translated_553_residues MNDIEISQNAEMLPIQTIAKQAGFDEKVVEPYGHYKAKIDIFSEKPNTQLGKLVLVTSINPTPAGEGKSTVTVGLGDALN DLTGSAMIALREPSQGPVMGMKGGATGGGYSQVIPMDDINLHFTGDMHALTAANNTLAALIDNHLQQGNELNIDPRTIVW RRCLDINDRALRNIVIGLGGRFSGVPREDKFDITVASELMAILCLAQDLKDLKERINRILIANNYDGQPIFVKDLHVGGA IATLLKDAIKPNLVQTLGHTPAIIHGGPFANIAHGCNSVLATKTALRHAKYTVTEAGFGADLGAEKFLDIKTPVLGKQPD AIVIVATVRALKYNGGAKLADLKIEDVEALQKGYINLQRHIKNMQRYNIPVTVSINHFISDTDQEVNTLVKLIEAEGISA IVTDAWAKGGAGSKDLANEVIALADTNQGPMTKLYDNNGRIEDKIKTIVQKIYGGSDVEYSPQALKKIKECVANGWDHLP ICMAKSQYSFSDDPKQLGAPSDFVMHVNDINIRLGAGFLVVQTGKVLTMPGLPKHPAALDIDIDSKGEITGLF >Mature_553_residues MNDIEISQNAEMLPIQTIAKQAGFDEKVVEPYGHYKAKIDIFSEKPNTQLGKLVLVTSINPTPAGEGKSTVTVGLGDALN DLTGSAMIALREPSQGPVMGMKGGATGGGYSQVIPMDDINLHFTGDMHALTAANNTLAALIDNHLQQGNELNIDPRTIVW RRCLDINDRALRNIVIGLGGRFSGVPREDKFDITVASELMAILCLAQDLKDLKERINRILIANNYDGQPIFVKDLHVGGA IATLLKDAIKPNLVQTLGHTPAIIHGGPFANIAHGCNSVLATKTALRHAKYTVTEAGFGADLGAEKFLDIKTPVLGKQPD AIVIVATVRALKYNGGAKLADLKIEDVEALQKGYINLQRHIKNMQRYNIPVTVSINHFISDTDQEVNTLVKLIEAEGISA IVTDAWAKGGAGSKDLANEVIALADTNQGPMTKLYDNNGRIEDKIKTIVQKIYGGSDVEYSPQALKKIKECVANGWDHLP ICMAKSQYSFSDDPKQLGAPSDFVMHVNDINIRLGAGFLVVQTGKVLTMPGLPKHPAALDIDIDSKGEITGLF
Specific function: Unknown
COG id: COG2759
COG function: function code F; Formyltetrahydrofolate synthetase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the formate--tetrahydrofolate ligase family
Homologues:
Organism=Homo sapiens, GI222136639, Length=622, Percent_Identity=41.6398713826367, Blast_Score=439, Evalue=1e-123, Organism=Homo sapiens, GI36796743, Length=619, Percent_Identity=42.6494345718901, Blast_Score=435, Evalue=1e-122, Organism=Homo sapiens, GI310124614, Length=84, Percent_Identity=44.047619047619, Blast_Score=81, Evalue=3e-15, Organism=Caenorhabditis elegans, GI17568737, Length=622, Percent_Identity=42.443729903537, Blast_Score=423, Evalue=1e-118, Organism=Caenorhabditis elegans, GI17568739, Length=622, Percent_Identity=42.443729903537, Blast_Score=423, Evalue=1e-118, Organism=Saccharomyces cerevisiae, GI6319558, Length=633, Percent_Identity=42.1800947867299, Blast_Score=431, Evalue=1e-121, Organism=Saccharomyces cerevisiae, GI6321643, Length=628, Percent_Identity=42.0382165605096, Blast_Score=426, Evalue=1e-120, Organism=Drosophila melanogaster, GI24645718, Length=621, Percent_Identity=41.3848631239936, Blast_Score=423, Evalue=1e-118, Organism=Drosophila melanogaster, GI17137370, Length=621, Percent_Identity=41.3848631239936, Blast_Score=423, Evalue=1e-118, Organism=Drosophila melanogaster, GI62472483, Length=621, Percent_Identity=41.3848631239936, Blast_Score=423, Evalue=1e-118, Organism=Drosophila melanogaster, GI45551871, Length=621, Percent_Identity=41.3848631239936, Blast_Score=423, Evalue=1e-118,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): FTHS_PEDPA (Q03FM6)
Other databases:
- EMBL: CP000422 - RefSeq: YP_804438.1 - ProteinModelPortal: Q03FM6 - SMR: Q03FM6 - STRING: Q03FM6 - GeneID: 4417751 - GenomeReviews: CP000422_GR - KEGG: ppe:PEPE_0939 - NMPDR: fig|278197.10.peg.834 - eggNOG: COG2759 - HOGENOM: HBG677721 - OMA: EIMAVLC - PhylomeDB: Q03FM6 - BioCyc: PPEN278197:PEPE_0939-MONOMER - HAMAP: MF_01543 - InterPro: IPR000559 - InterPro: IPR020628
Pfam domain/function: PF01268 FTHFS
EC number: =6.3.4.3
Molecular weight: Translated: 59600; Mature: 59600
Theoretical pI: Translated: 6.40; Mature: 6.40
Prosite motif: PS00721 FTHFS_1; PS00722 FTHFS_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNDIEISQNAEMLPIQTIAKQAGFDEKVVEPYGHYKAKIDIFSEKPNTQLGKLVLVTSIN CCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEECC PTPAGEGKSTVTVGLGDALNDLTGSAMIALREPSQGPVMGMKGGATGGGYSQVIPMDDIN CCCCCCCCCEEEEECCHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCE LHFTGDMHALTAANNTLAALIDNHLQQGNELNIDPRTIVWRRCLDINDRALRNIVIGLGG EEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHEEEECCC RFSGVPREDKFDITVASELMAILCLAQDLKDLKERINRILIANNYDGQPIFVKDLHVGGA CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEECCCHH IATLLKDAIKPNLVQTLGHTPAIIHGGPFANIAHGCNSVLATKTALRHAKYTVTEAGFGA HHHHHHHHHCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC DLGAEKFLDIKTPVLGKQPDAIVIVATVRALKYNGGAKLADLKIEDVEALQKGYINLQRH CCCCHHEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHH IKNMQRYNIPVTVSINHFISDTDQEVNTLVKLIEAEGISAIVTDAWAKGGAGSKDLANEV HHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCHHHHHHE IALADTNQGPMTKLYDNNGRIEDKIKTIVQKIYGGSDVEYSPQALKKIKECVANGWDHLP EEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCE ICMAKSQYSFSDDPKQLGAPSDFVMHVNDINIRLGAGFLVVQTGKVLTMPGLPKHPAALD EEEECCCCCCCCCHHHHCCCCCEEEEEEEEEEEECCCEEEEECCCEEECCCCCCCCCEEE IDIDSKGEITGLF EEECCCCCEEECC >Mature Secondary Structure MNDIEISQNAEMLPIQTIAKQAGFDEKVVEPYGHYKAKIDIFSEKPNTQLGKLVLVTSIN CCCCCCCCCCCCCHHHHHHHHCCCCHHHHCCCCCEEEEEEEECCCCCCCCCCEEEEEECC PTPAGEGKSTVTVGLGDALNDLTGSAMIALREPSQGPVMGMKGGATGGGYSQVIPMDDIN CCCCCCCCCEEEEECCHHHHHCCCCEEEEEECCCCCCEEECCCCCCCCCCEEEEECCCCE LHFTGDMHALTAANNTLAALIDNHLQQGNELNIDPRTIVWRRCLDINDRALRNIVIGLGG EEEECCCEEEEECCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHCCCCHHHHHHEEEECCC RFSGVPREDKFDITVASELMAILCLAQDLKDLKERINRILIANNYDGQPIFVKDLHVGGA CCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCCEEEEEEECCCHH IATLLKDAIKPNLVQTLGHTPAIIHGGPFANIAHGCNSVLATKTALRHAKYTVTEAGFGA HHHHHHHHHCCHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCEEEEEECCCCC DLGAEKFLDIKTPVLGKQPDAIVIVATVRALKYNGGAKLADLKIEDVEALQKGYINLQRH CCCCHHEEECCCCCCCCCCCCEEEEEEEEEEEECCCCEEEEEEHHHHHHHHHHHHHHHHH IKNMQRYNIPVTVSINHFISDTDQEVNTLVKLIEAEGISAIVTDAWAKGGAGSKDLANEV HHHHHHCCCCEEEEEHHHHCCCHHHHHHHHHHHHHCCCEEEEEHHHCCCCCCCHHHHHHE IALADTNQGPMTKLYDNNGRIEDKIKTIVQKIYGGSDVEYSPQALKKIKECVANGWDHLP EEEEECCCCCCEEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHCCCCCCE ICMAKSQYSFSDDPKQLGAPSDFVMHVNDINIRLGAGFLVVQTGKVLTMPGLPKHPAALD EEEECCCCCCCCCHHHHCCCCCEEEEEEEEEEEECCCEEEEECCCEEECCCCCCCCCEEE IDIDSKGEITGLF EEECCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA