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The map label for this gene is ydaS [H]

Identifier: 116492670

GI number: 116492670

Start: 904542

End: 904790

Strand: Direct

Name: ydaS [H]

Synonym: PEPE_0905

Alternate gene names: 116492670

Gene position: 904542-904790 (Clockwise)

Preceding gene: 116492669

Following gene: 116492674

Centisome position: 49.36

GC content: 40.16

Gene sequence:

>249_bases
ATGGGACTTATTTGGACATTGATTGTAGGTGCTATTATTGGTGTTATTGCCGGGGCTCTTACAAGTAAAGACATGCCTGC
TGGTTGGATTGGCAATATTGTTGCTGGTTTGGTTGGTTCTTGGCTAGGACAAAGCTTATTGGGTACTTGGGGACCTTCAT
TAGCTGGTATGGCTTTAATACCATCAATTATTGGCGCTGTTATTCTAGTAGCTATAGTTTCTTGGATTCTAAAAGCTACA
CATAAGTAA

Upstream 100 bases:

>100_bases
TATAAAATGAAAATTATAAGGCATAAGGCCTTTTACTTGTTTATATTATTTAGCTTTGATAACATTAATTTTACTTAGTT
AGGGAAGGAGGCGTGAACAG

Downstream 100 bases:

>100_bases
TTAGCTATTTTATATAATATTTTGAGGATGATTCTAAATAGAATCGTCCTTTTTATTTGGATAAAAATTATGAATGATTA
ATTGTTAGAGCAAATTAAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 82; Mature: 81

Protein sequence:

>82_residues
MGLIWTLIVGAIIGVIAGALTSKDMPAGWIGNIVAGLVGSWLGQSLLGTWGPSLAGMALIPSIIGAVILVAIVSWILKAT
HK

Sequences:

>Translated_82_residues
MGLIWTLIVGAIIGVIAGALTSKDMPAGWIGNIVAGLVGSWLGQSLLGTWGPSLAGMALIPSIIGAVILVAIVSWILKAT
HK
>Mature_81_residues
GLIWTLIVGAIIGVIAGALTSKDMPAGWIGNIVAGLVGSWLGQSLLGTWGPSLAGMALIPSIIGAVILVAIVSWILKATH
K

Specific function: Unknown

COG id: COG2261

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0410 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007341 [H]

Pfam domain/function: PF04226 Transgly_assoc [H]

EC number: NA

Molecular weight: Translated: 8302; Mature: 8171

Theoretical pI: Translated: 10.51; Mature: 10.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MGLIWTLIVGAIIGVIAGALTSKDMPAGWIGNIVAGLVGSWLGQSLLGTWGPSLAGMALI
CHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
PSIIGAVILVAIVSWILKATHK
HHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
GLIWTLIVGAIIGVIAGALTSKDMPAGWIGNIVAGLVGSWLGQSLLGTWGPSLAGMALI
HHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
PSIIGAVILVAIVSWILKATHK
HHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]