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The map label for this gene is ysxB [H]

Identifier: 116492579

GI number: 116492579

Start: 820952

End: 821278

Strand: Direct

Name: ysxB [H]

Synonym: PEPE_0812

Alternate gene names: 116492579

Gene position: 820952-821278 (Clockwise)

Preceding gene: 116492578

Following gene: 116492580

Centisome position: 44.8

GC content: 35.47

Gene sequence:

>327_bases
ATGATACAGACTTGTTTTTATAGAGATAAAGATCGAATCAGTGGTTTTAAGATAACTGGTCATGCTGACTCTGGTGAGTA
TGGACGTGATATCGTATGTGCGGCTGTGTCAGTCTTATCGATAAATACAGTTAACAGTATCGAGCAAATCACTAAGATAA
TGCCACTAGTTGATTCAGACGATGAAAATGGTGGATTTTTATCTGTTAATGTTCCTGAAAGCAGTGATGTTGATTCGAAT
CGAATGGCTCAAGTTTTACTTGAGGCACTTGAGATTGGATTAAGGGATATTAGTAAGTCATACAAAGAATATCTAGTAAT
GAATTAA

Upstream 100 bases:

>100_bases
GGCTAAGAAGAACCAACATACAAAGACTGGTCATCGTCAACCATATACAAAAGTTATGATTGATTCAATCAACGCTTAAT
TTGATTGAAGGTGATGTGGC

Downstream 100 bases:

>100_bases
TTTATTCGGAGGTGTAATTAACCATGGAAATGAATCTACAATTCTTCTCTCATCATAAGGGGGGCGGTTCCACTTCTAAC
GGCCGTGACTCAGCTGGTCG

Product: ribosomal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 108; Mature: 108

Protein sequence:

>108_residues
MIQTCFYRDKDRISGFKITGHADSGEYGRDIVCAAVSVLSINTVNSIEQITKIMPLVDSDDENGGFLSVNVPESSDVDSN
RMAQVLLEALEIGLRDISKSYKEYLVMN

Sequences:

>Translated_108_residues
MIQTCFYRDKDRISGFKITGHADSGEYGRDIVCAAVSVLSINTVNSIEQITKIMPLVDSDDENGGFLSVNVPESSDVDSN
RMAQVLLEALEIGLRDISKSYKEYLVMN
>Mature_108_residues
MIQTCFYRDKDRISGFKITGHADSGEYGRDIVCAAVSVLSINTVNSIEQITKIMPLVDSDDENGGFLSVNVPESSDVDSN
RMAQVLLEALEIGLRDISKSYKEYLVMN

Specific function: Unknown

COG id: COG2868

COG function: function code J; Predicted ribosomal protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: To M.genitalium MG233 [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007422 [H]

Pfam domain/function: PF04327 DUF464 [H]

EC number: NA

Molecular weight: Translated: 11953; Mature: 11953

Theoretical pI: Translated: 4.27; Mature: 4.27

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
3.7 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIQTCFYRDKDRISGFKITGHADSGEYGRDIVCAAVSVLSINTVNSIEQITKIMPLVDSD
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
DENGGFLSVNVPESSDVDSNRMAQVLLEALEIGLRDISKSYKEYLVMN
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MIQTCFYRDKDRISGFKITGHADSGEYGRDIVCAAVSVLSINTVNSIEQITKIMPLVDSD
CCCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCC
DENGGFLSVNVPESSDVDSNRMAQVLLEALEIGLRDISKSYKEYLVMN
CCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1942049; 9384377; 3918016 [H]