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The map label for this gene is 116492574

Identifier: 116492574

GI number: 116492574

Start: 816782

End: 817183

Strand: Direct

Name: 116492574

Synonym: PEPE_0806

Alternate gene names: NA

Gene position: 816782-817183 (Clockwise)

Preceding gene: 116492573

Following gene: 116492575

Centisome position: 44.57

GC content: 30.1

Gene sequence:

>402_bases
GTGCCATTTCATGTAAGTTTATTGCAATCTTATATGGCAATCGTTGATGATAAATTGATGATTGCTTTTTTGTTTGCAGT
AATTTTAGATATTGGGACTGGAATGGCTAAAGGGATTATTAATCAAAGAACGAGTAAATTGAATAGTACTAAGGGATTAT
TTGGGTTAATTAAACATTCTACGGTAATATTTTTAGTTTTATTGGTTTATCCGTTCATGAATGCAATCGGGTTTGAACCA
ACAGCTAATGCGTTATTAATTTTTTATATCGTAACATATGCAATATCTGTTGTTGAAAATTTGGGTCAAATGGGAGTGCC
ATTTCCAGACTTTATCAAAAAATATTTTGTGAAGCTTCAAGATGATTATAGTAAAGGGGGACATAATGACAAAATTAAAT
AA

Upstream 100 bases:

>100_bases
ATTAGCAAGAAACTACTTTGAAATTCAATGGAAAGAATTGACTAAAGATATCAAATAGGTATCTTTTTTTATTTTGGGTA
AGAAAGGAGGATGTAATACA

Downstream 100 bases:

>100_bases
GCTAAAATGGGTTGTTGCGATTGCAATGGCTTTTTTTATTGGAGTAAATACCGCTCCGCTGGTTAGTGCCAATGCTGGTA
GTTCTACCAATAATCAATAT

Product: Phage-related holin (lysis protein)

Products: NA

Alternate protein names: Xin Secretion/Phage Lysis Holin

Number of amino acids: Translated: 133; Mature: 132

Protein sequence:

>133_residues
MPFHVSLLQSYMAIVDDKLMIAFLFAVILDIGTGMAKGIINQRTSKLNSTKGLFGLIKHSTVIFLVLLVYPFMNAIGFEP
TANALLIFYIVTYAISVVENLGQMGVPFPDFIKKYFVKLQDDYSKGGHNDKIK

Sequences:

>Translated_133_residues
MPFHVSLLQSYMAIVDDKLMIAFLFAVILDIGTGMAKGIINQRTSKLNSTKGLFGLIKHSTVIFLVLLVYPFMNAIGFEP
TANALLIFYIVTYAISVVENLGQMGVPFPDFIKKYFVKLQDDYSKGGHNDKIK
>Mature_132_residues
PFHVSLLQSYMAIVDDKLMIAFLFAVILDIGTGMAKGIINQRTSKLNSTKGLFGLIKHSTVIFLVLLVYPFMNAIGFEPT
ANALLIFYIVTYAISVVENLGQMGVPFPDFIKKYFVKLQDDYSKGGHNDKIK

Specific function: Unknown

COG id: COG4824

COG function: function code R; Phage-related holin (Lysis protein)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14855; Mature: 14724

Theoretical pI: Translated: 9.60; Mature: 9.60

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.5 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPFHVSLLQSYMAIVDDKLMIAFLFAVILDIGTGMAKGIINQRTSKLNSTKGLFGLIKHS
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIFLVLLVYPFMNAIGFEPTANALLIFYIVTYAISVVENLGQMGVPFPDFIKKYFVKLQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
DDYSKGGHNDKIK
HHHCCCCCCCCCC
>Mature Secondary Structure 
PFHVSLLQSYMAIVDDKLMIAFLFAVILDIGTGMAKGIINQRTSKLNSTKGLFGLIKHS
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TVIFLVLLVYPFMNAIGFEPTANALLIFYIVTYAISVVENLGQMGVPFPDFIKKYFVKLQ
HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHH
DDYSKGGHNDKIK
HHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA