| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492573
Identifier: 116492573
GI number: 116492573
Start: 816137
End: 816739
Strand: Direct
Name: 116492573
Synonym: PEPE_0805
Alternate gene names: NA
Gene position: 816137-816739 (Clockwise)
Preceding gene: 116492572
Following gene: 116492574
Centisome position: 44.54
GC content: 33.17
Gene sequence:
>603_bases ATGGATGCAACAACTTTAGACGTAATTATTACAGGCGGAATATCAGTGTTTGGTGCAGGTTTATCATTTTTAGGAGCTCG AAAGGGTGCTAAGACACAAATGGAAACAACTGAAAAATCCGTCGAGAATAATATGGAGATTGCTAGGATGAACATTGAAG AAAAATTAATTGCTGAGAATAAGATTAACTGGAATAACAGGACACGCGAATTAATTTCTAAATTTATACGCCAATGTTTT GATATTAATCATGGCATTGATCAGGTTCAAATTATTAATAAAAAGCGAGAATTGTCTGTCGATCCTTCGCTACCAAGTAA AGAACGAAATAAATATTCTAAGCTTTCTAAAGAAGATTTAGAAATGGCGAAAGAAACAATGGTAACAATTTCCAACGCTG TAGAAACCGTCACGGAAATCAGATTACACATTTTTGATAGATCAGATTCGTTGGGAAATGAATTACTAGAAAGAATAATA GATGTCGAAAAGTACTTTCAAAGGATGGAGAAAATTCCTTCTACGGAGCTGTCTCAATTAACAGAATTAGCAAGAAACTA CTTTGAAATTCAATGGAAAGAATTGACTAAAGATATCAAATAG
Upstream 100 bases:
>100_bases AAATCGTTGGAGAAGATTACGTAGCGCCTGAAACATAGGCGTTTTTTATTTCTCTTAGTAGTAAAATAATTATTAAATAA ATTACTAGGAGAATATTGAA
Downstream 100 bases:
>100_bases GTATCTTTTTTTATTTTGGGTAAGAAAGGAGGATGTAATACAGTGCCATTTCATGTAAGTTTATTGCAATCTTATATGGC AATCGTTGATGATAAATTGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 200; Mature: 200
Protein sequence:
>200_residues MDATTLDVIITGGISVFGAGLSFLGARKGAKTQMETTEKSVENNMEIARMNIEEKLIAENKINWNNRTRELISKFIRQCF DINHGIDQVQIINKKRELSVDPSLPSKERNKYSKLSKEDLEMAKETMVTISNAVETVTEIRLHIFDRSDSLGNELLERII DVEKYFQRMEKIPSTELSQLTELARNYFEIQWKELTKDIK
Sequences:
>Translated_200_residues MDATTLDVIITGGISVFGAGLSFLGARKGAKTQMETTEKSVENNMEIARMNIEEKLIAENKINWNNRTRELISKFIRQCF DINHGIDQVQIINKKRELSVDPSLPSKERNKYSKLSKEDLEMAKETMVTISNAVETVTEIRLHIFDRSDSLGNELLERII DVEKYFQRMEKIPSTELSQLTELARNYFEIQWKELTKDIK >Mature_200_residues MDATTLDVIITGGISVFGAGLSFLGARKGAKTQMETTEKSVENNMEIARMNIEEKLIAENKINWNNRTRELISKFIRQCF DINHGIDQVQIINKKRELSVDPSLPSKERNKYSKLSKEDLEMAKETMVTISNAVETVTEIRLHIFDRSDSLGNELLERII DVEKYFQRMEKIPSTELSQLTELARNYFEIQWKELTKDIK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23103; Mature: 23103
Theoretical pI: Translated: 5.48; Mature: 5.48
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MDATTLDVIITGGISVFGAGLSFLGARKGAKTQMETTEKSVENNMEIARMNIEEKLIAEN CCCCEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHC KINWNNRTRELISKFIRQCFDINHGIDQVQIINKKRELSVDPSLPSKERNKYSKLSKEDL CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHH EMAKETMVTISNAVETVTEIRLHIFDRSDSLGNELLERIIDVEKYFQRMEKIPSTELSQL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TELARNYFEIQWKELTKDIK HHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MDATTLDVIITGGISVFGAGLSFLGARKGAKTQMETTEKSVENNMEIARMNIEEKLIAEN CCCCEEEEEEECCHHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHC KINWNNRTRELISKFIRQCFDINHGIDQVQIINKKRELSVDPSLPSKERNKYSKLSKEDL CCCCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCHHHH EMAKETMVTISNAVETVTEIRLHIFDRSDSLGNELLERIIDVEKYFQRMEKIPSTELSQL HHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHH TELARNYFEIQWKELTKDIK HHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA