Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492520

Identifier: 116492520

GI number: 116492520

Start: 784187

End: 784912

Strand: Direct

Name: 116492520

Synonym: PEPE_0752

Alternate gene names: NA

Gene position: 784187-784912 (Clockwise)

Preceding gene: 116492518

Following gene: 116492521

Centisome position: 42.8

GC content: 36.09

Gene sequence:

>726_bases
ATGAACGAATTAGTAATCATGAAAGACCAACAAGCAGTAACGACTAGCTTACAAGTAGCAGAAGTATTTGGAAAAGAACA
TAAAAATGTGCTGAGAGATATCAGCAACTTAAATTCAGATCGGCTCAATTTTGAGCAGATATTTATGGAAAGCACAGAAC
CAGATTTATACGGACGTGACCGTCGAATTTATTATATGAACCGAGACGGCTTTACTTTACTAGCAATGGGATTTACAGGA
AAGAAAGCATTGGACTTCAAACTGAAATACATCGAAGCCTTTAACAATATGGAAGAAGTAATTAAGGAAGAACGCATCCA
ATTACCTAGTGATCCAATGAAAGTACTGGAATTAATATTTGAAGCCAACAAAAACACGGATAAGAAAGTAGAACGGATTG
ATAAAGACGTTGATTACCTAAAAAACAACCAACGCTTAGACCAAACAGAATACAGCTACATTTCACGAAAAGTATCAAAT
AAGGTTAATGAATACTCTCAAGTCCACGGGTCAACATTAACAGCTCCTCAACGAAGTAAATTATTCAAAGATATCAACCG
AGGAATCAACGAAGTAACAGGTGTTAAGACGCGTTCACAACTACGTCAGAAAGATTTTGATATAGCAGATGAATTTATTG
ACAACTGGCAACCATCAACGGCTACCGTTCAAATTATTAAACAAATGAGTAATGTAGCAGACGGACAAACAACGTTAGGA
GCATAA

Upstream 100 bases:

>100_bases
AAGCCTTAGTTAATTCAAGAGCAATTTCTTTGTCTGACATTATCATATCACCACCTTTAATTGAACTAATTAAATTATAC
ACACGAAAGAAGGAAAACAA

Downstream 100 bases:

>100_bases
AAATGGCATTAGACACAATGTTTGAAGCCATGTCTAAAGAATTGGTTAATGAAGTTTTAGACAGGCTTAGAGATGAAGCA
ATTATTAAGTTGGACCAAGA

Product: Phage anti-repressor protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 241; Mature: 241

Protein sequence:

>241_residues
MNELVIMKDQQAVTTSLQVAEVFGKEHKNVLRDISNLNSDRLNFEQIFMESTEPDLYGRDRRIYYMNRDGFTLLAMGFTG
KKALDFKLKYIEAFNNMEEVIKEERIQLPSDPMKVLELIFEANKNTDKKVERIDKDVDYLKNNQRLDQTEYSYISRKVSN
KVNEYSQVHGSTLTAPQRSKLFKDINRGINEVTGVKTRSQLRQKDFDIADEFIDNWQPSTATVQIIKQMSNVADGQTTLG
A

Sequences:

>Translated_241_residues
MNELVIMKDQQAVTTSLQVAEVFGKEHKNVLRDISNLNSDRLNFEQIFMESTEPDLYGRDRRIYYMNRDGFTLLAMGFTG
KKALDFKLKYIEAFNNMEEVIKEERIQLPSDPMKVLELIFEANKNTDKKVERIDKDVDYLKNNQRLDQTEYSYISRKVSN
KVNEYSQVHGSTLTAPQRSKLFKDINRGINEVTGVKTRSQLRQKDFDIADEFIDNWQPSTATVQIIKQMSNVADGQTTLG
A
>Mature_241_residues
MNELVIMKDQQAVTTSLQVAEVFGKEHKNVLRDISNLNSDRLNFEQIFMESTEPDLYGRDRRIYYMNRDGFTLLAMGFTG
KKALDFKLKYIEAFNNMEEVIKEERIQLPSDPMKVLELIFEANKNTDKKVERIDKDVDYLKNNQRLDQTEYSYISRKVSN
KVNEYSQVHGSTLTAPQRSKLFKDINRGINEVTGVKTRSQLRQKDFDIADEFIDNWQPSTATVQIIKQMSNVADGQTTLG
A

Specific function: Unknown

COG id: COG3646

COG function: function code S; Uncharacterized phage-encoded protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018877
- InterPro:   IPR014054
- InterPro:   IPR019104 [H]

Pfam domain/function: PF10549 ORF11CD3; PF09669 Phage_pRha [H]

EC number: NA

Molecular weight: Translated: 27938; Mature: 27938

Theoretical pI: Translated: 5.94; Mature: 5.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNELVIMKDQQAVTTSLQVAEVFGKEHKNVLRDISNLNSDRLNFEQIFMESTEPDLYGRD
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
RRIYYMNRDGFTLLAMGFTGKKALDFKLKYIEAFNNMEEVIKEERIQLPSDPMKVLELIF
CEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EANKNTDKKVERIDKDVDYLKNNQRLDQTEYSYISRKVSNKVNEYSQVHGSTLTAPQRSK
HCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LFKDINRGINEVTGVKTRSQLRQKDFDIADEFIDNWQPSTATVQIIKQMSNVADGQTTLG
HHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
A
C
>Mature Secondary Structure
MNELVIMKDQQAVTTSLQVAEVFGKEHKNVLRDISNLNSDRLNFEQIFMESTEPDLYGRD
CCCEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCCCCCC
RRIYYMNRDGFTLLAMGFTGKKALDFKLKYIEAFNNMEEVIKEERIQLPSDPMKVLELIF
CEEEEECCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHH
EANKNTDKKVERIDKDVDYLKNNQRLDQTEYSYISRKVSNKVNEYSQVHGSTLTAPQRSK
HCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHH
LFKDINRGINEVTGVKTRSQLRQKDFDIADEFIDNWQPSTATVQIIKQMSNVADGQTTLG
HHHHHHHHHHHHHCCHHHHHHHHHCCCHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCC
A
C

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]