| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492508
Identifier: 116492508
GI number: 116492508
Start: 777251
End: 778126
Strand: Direct
Name: 116492508
Synonym: PEPE_0740
Alternate gene names: NA
Gene position: 777251-778126 (Clockwise)
Preceding gene: 116492507
Following gene: 116492509
Centisome position: 42.42
GC content: 36.07
Gene sequence:
>876_bases ATGGCAGATGAACGTATGAATCACGAAGAATCCAGTCGGGATATTTTAATCTCGCAACTGAAAAACAAGGATCAATACAT AAACGAATTGGCGGAAGCAATTGATCAGCACAACGATTTGCGCATTTATCAATTGCTAGGACCTTTGCGCTATCGGGATG AAATTAACGATGCTTTCGACTTGGAATTTGGAGAATATCCATTTGAGTTGGTAAAGGATCAAAGACAAGAATTAGCACAT TTCTTGAGTGATAATTTGATTGATTATTTAATCGAAAAATTTCCATTTTTCTATTACCGCGAAGTTGAAAAGGGACAATT TAAAGTCTTCTTTGGTAATTGGTGGGATCGCCGTGAAATCGGGACACTTGATGCATTGAATGTTGAATATACACTAGACG AAGAAAAACTTGAAAAGCTTGAAAAAGCATTGAATATTGATGAAGCGGGTAAAACTTTAAACTCAGACCAAATCAACCAA TTATCAGCTAAAAATGTTGAGTTACAAAAAGTGGTTACCGCTCAAACTGAACTTGAAGATAAGCAAAAAGAATTGATGGA ACGTCAAAACAACTTGTCAGATAAGGGCGGTTTATTTGAATCAAATAAGATTAAAGAAGAACGCCAACAAATTAAGGAAG AACTTGCTAAGATCGCTGAAGAAGAAGAACAAGCGGCTAAGGCTCCTGAACAAATTCGTAATAATCAAAAGCAAATTTTA GTTCTTTCCAAGGAAGATACCACGCTCAGTTTTGAAATTGAGGCTTTAAAGAAGAGTTTCACGAGTTATAGTGAGTTCCG TGAAACTGCCGACCAACTGTATAAAAATTATCTCAGTAGCCTATTAGACGAAGGGCAGGTAAAGTCTAATGGATAA
Upstream 100 bases:
>100_bases CTTTTTTTGTGAAGAATGTTTAAATTTATTGTCGAATTCCTTTATTTATTTGAAATTTTTTTGTAACATTAGAGACAGAA CGATAGAATGGAGCGATATC
Downstream 100 bases:
>100_bases CACAATCAATGAAGATAAAAAAAGAGCAACATTATCCGACAAGTTGCTGAAAGTACAATCTGATTTGGATGCTGGATTAA GCAAAGGTCGTAGTTTCGCA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 291; Mature: 290
Protein sequence:
>291_residues MADERMNHEESSRDILISQLKNKDQYINELAEAIDQHNDLRIYQLLGPLRYRDEINDAFDLEFGEYPFELVKDQRQELAH FLSDNLIDYLIEKFPFFYYREVEKGQFKVFFGNWWDRREIGTLDALNVEYTLDEEKLEKLEKALNIDEAGKTLNSDQINQ LSAKNVELQKVVTAQTELEDKQKELMERQNNLSDKGGLFESNKIKEERQQIKEELAKIAEEEEQAAKAPEQIRNNQKQIL VLSKEDTTLSFEIEALKKSFTSYSEFRETADQLYKNYLSSLLDEGQVKSNG
Sequences:
>Translated_291_residues MADERMNHEESSRDILISQLKNKDQYINELAEAIDQHNDLRIYQLLGPLRYRDEINDAFDLEFGEYPFELVKDQRQELAH FLSDNLIDYLIEKFPFFYYREVEKGQFKVFFGNWWDRREIGTLDALNVEYTLDEEKLEKLEKALNIDEAGKTLNSDQINQ LSAKNVELQKVVTAQTELEDKQKELMERQNNLSDKGGLFESNKIKEERQQIKEELAKIAEEEEQAAKAPEQIRNNQKQIL VLSKEDTTLSFEIEALKKSFTSYSEFRETADQLYKNYLSSLLDEGQVKSNG >Mature_290_residues ADERMNHEESSRDILISQLKNKDQYINELAEAIDQHNDLRIYQLLGPLRYRDEINDAFDLEFGEYPFELVKDQRQELAHF LSDNLIDYLIEKFPFFYYREVEKGQFKVFFGNWWDRREIGTLDALNVEYTLDEEKLEKLEKALNIDEAGKTLNSDQINQL SAKNVELQKVVTAQTELEDKQKELMERQNNLSDKGGLFESNKIKEERQQIKEELAKIAEEEEQAAKAPEQIRNNQKQILV LSKEDTTLSFEIEALKKSFTSYSEFRETADQLYKNYLSSLLDEGQVKSNG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34230; Mature: 34099
Theoretical pI: Translated: 4.36; Mature: 4.36
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADERMNHEESSRDILISQLKNKDQYINELAEAIDQHNDLRIYQLLGPLRYRDEINDAFD CCCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHCCCHHC LEFGEYPFELVKDQRQELAHFLSDNLIDYLIEKFPFFYYREVEKGQFKVFFGNWWDRREI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCC GTLDALNVEYTLDEEKLEKLEKALNIDEAGKTLNSDQINQLSAKNVELQKVVTAQTELED CCCCCCCEEEEECHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH KQKELMERQNNLSDKGGLFESNKIKEERQQIKEELAKIAEEEEQAAKAPEQIRNNQKQIL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEE VLSKEDTTLSFEIEALKKSFTSYSEFRETADQLYKNYLSSLLDEGQVKSNG EEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ADERMNHEESSRDILISQLKNKDQYINELAEAIDQHNDLRIYQLLGPLRYRDEINDAFD CCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHCCCCEEHHHHHCCHHHHHHCCCHHC LEFGEYPFELVKDQRQELAHFLSDNLIDYLIEKFPFFYYREVEKGQFKVFFGNWWDRREI CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHCCCCEEEEEECCCCCCCCC GTLDALNVEYTLDEEKLEKLEKALNIDEAGKTLNSDQINQLSAKNVELQKVVTAQTELED CCCCCCCEEEEECHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHH KQKELMERQNNLSDKGGLFESNKIKEERQQIKEELAKIAEEEEQAAKAPEQIRNNQKQIL HHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCEEE VLSKEDTTLSFEIEALKKSFTSYSEFRETADQLYKNYLSSLLDEGQVKSNG EEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA