Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116492478

Identifier: 116492478

GI number: 116492478

Start: 748266

End: 749366

Strand: Direct

Name: 116492478

Synonym: PEPE_0710

Alternate gene names: NA

Gene position: 748266-749366 (Clockwise)

Preceding gene: 116492477

Following gene: 116492479

Centisome position: 40.84

GC content: 37.6

Gene sequence:

>1101_bases
TTGCAAGCATGCGCAGTGATTGCAGAGTTTAATCCATTTCATAATGGACATCAATATTTGTTAGAGCAGGCACGCAAGGT
TACTAAGGCGGACTTAGTGATCGTAATTATGAGTGGCAATTTTGTACAGCGGGGGGAACCCGCCTTGATTAATAAATGGG
AGAGAGCACGGGTTGCCATTAATTGTGGTGCTGATTTAGTTGTAGAAATACCTACTGAATATGCCATTGATTCTGCTAAA
GAATTTGCCCATGCGGGAGTAGAGATTGCTCAAAAATTAGGAGCTAGCTTTTTAGCTTTTGGGAGTGAAAATCCAGATTT
GGATTTTGAAAATGAGAGTAAGATTCTGGACCGACAATTTGACCAGAGAGCCAAAAAATATAATCAAAATTTTGCAGCTC
AATTATTTGATGATACAGCCATTATGAACTCGAACGATATTCTAGGAATCAATTATGCGTACTGGAATTCTAAATCAAAA
AGAGGCTTGCAGTTAATACCATTGCAAAGGGAACAAGCAGATCACCGAGATACGGAGATAAAGGGCTCGATTGCTAGTGC
ATCGGCAATTCGGAGGGCAGCTTTAGAACAATCAGAGTACTTTAACGCGGTACCTAAGGCGTCTTTAAAGGCTATTAGAA
ATGCTAAATTAACAAGCTGGGAAGATTTCTGGATAATGTTAAATTATCGGTTATTAACTTCAACGCCCCAAGAATTACGT
CATATAAAGGGTGTTACAGAGGGTTTCGAAAATCGTATTTTAAATTTGGTTGATAAAAGTAACTCGTTTACAGAGTTGAT
GCAGAAGTTGAAGACTAAAAGATACACTTATACTAGAATTCAACGAAGTTTAACGAATATTTTACTTAATATCCAAGCTA
CTCCGTTTAATCTAACTAAGACGAGATTATTGGCGACAAATCAGCTCGGCCGGATTTTTATCCGAGAAGCAGCCCTTGGA
TCAGTAGTAATGACCAAAGTCACCAAAGAAGATTTTGAAAATAATTATGCAATTACAAAACGAGCAGACGATTTATACCA
ATTAGTTTCTCCATATCAATGGGGAAAGGGCCCTATTATAAAAAAGAATGTCAAGGAATAA

Upstream 100 bases:

>100_bases
AAGCTGGTTTTTCTAAAATCAAATACTATGCTGATTATGGAAAAGCTGAAGTAGATGAAAAAACAACTCGGTGGTTCTTT
AGTTGTAGGAGGTAGCTGTA

Downstream 100 bases:

>100_bases
ACGTTGACAATGTGGTTCCACATGGTATAATTGTTTCTGTTGCATTGGAGGTTCATTATGGAATGGTATTTTACAGAACT
GCGTAAGCACAAAGAGCCGT

Product: nucleotidyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 366; Mature: 366

Protein sequence:

>366_residues
MQACAVIAEFNPFHNGHQYLLEQARKVTKADLVIVIMSGNFVQRGEPALINKWERARVAINCGADLVVEIPTEYAIDSAK
EFAHAGVEIAQKLGASFLAFGSENPDLDFENESKILDRQFDQRAKKYNQNFAAQLFDDTAIMNSNDILGINYAYWNSKSK
RGLQLIPLQREQADHRDTEIKGSIASASAIRRAALEQSEYFNAVPKASLKAIRNAKLTSWEDFWIMLNYRLLTSTPQELR
HIKGVTEGFENRILNLVDKSNSFTELMQKLKTKRYTYTRIQRSLTNILLNIQATPFNLTKTRLLATNQLGRIFIREAALG
SVVMTKVTKEDFENNYAITKRADDLYQLVSPYQWGKGPIIKKNVKE

Sequences:

>Translated_366_residues
MQACAVIAEFNPFHNGHQYLLEQARKVTKADLVIVIMSGNFVQRGEPALINKWERARVAINCGADLVVEIPTEYAIDSAK
EFAHAGVEIAQKLGASFLAFGSENPDLDFENESKILDRQFDQRAKKYNQNFAAQLFDDTAIMNSNDILGINYAYWNSKSK
RGLQLIPLQREQADHRDTEIKGSIASASAIRRAALEQSEYFNAVPKASLKAIRNAKLTSWEDFWIMLNYRLLTSTPQELR
HIKGVTEGFENRILNLVDKSNSFTELMQKLKTKRYTYTRIQRSLTNILLNIQATPFNLTKTRLLATNQLGRIFIREAALG
SVVMTKVTKEDFENNYAITKRADDLYQLVSPYQWGKGPIIKKNVKE
>Mature_366_residues
MQACAVIAEFNPFHNGHQYLLEQARKVTKADLVIVIMSGNFVQRGEPALINKWERARVAINCGADLVVEIPTEYAIDSAK
EFAHAGVEIAQKLGASFLAFGSENPDLDFENESKILDRQFDQRAKKYNQNFAAQLFDDTAIMNSNDILGINYAYWNSKSK
RGLQLIPLQREQADHRDTEIKGSIASASAIRRAALEQSEYFNAVPKASLKAIRNAKLTSWEDFWIMLNYRLLTSTPQELR
HIKGVTEGFENRILNLVDKSNSFTELMQKLKTKRYTYTRIQRSLTNILLNIQATPFNLTKTRLLATNQLGRIFIREAALG
SVVMTKVTKEDFENNYAITKRADDLYQLVSPYQWGKGPIIKKNVKE

Specific function: Unknown

COG id: COG1323

COG function: function code R; Predicted nucleotidyltransferase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0348 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y710_PEDPA (Q03GA1)

Other databases:

- EMBL:   CP000422
- RefSeq:   YP_804213.1
- ProteinModelPortal:   Q03GA1
- STRING:   Q03GA1
- GeneID:   4418105
- GenomeReviews:   CP000422_GR
- KEGG:   ppe:PEPE_0710
- NMPDR:   fig|278197.10.peg.633
- eggNOG:   COG1323
- HOGENOM:   HBG477465
- OMA:   PNNILGF
- BioCyc:   PPEN278197:PEPE_0710-MONOMER
- HAMAP:   MF_01539
- InterPro:   IPR004821
- InterPro:   IPR014729
- InterPro:   IPR008513
- Gene3D:   G3DSA:3.40.50.620
- TIGRFAMs:   TIGR00125

Pfam domain/function: PF05636 DUF795

EC number: NA

Molecular weight: Translated: 41662; Mature: 41662

Theoretical pI: Translated: 9.68; Mature: 9.68

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQACAVIAEFNPFHNGHQYLLEQARKVTKADLVIVIMSGNFVQRGEPALINKWERARVAI
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCEEEEE
NCGADLVVEIPTEYAIDSAKEFAHAGVEIAQKLGASFLAFGSENPDLDFENESKILDRQF
ECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHH
DQRAKKYNQNFAAQLFDDTAIMNSNDILGINYAYWNSKSKRGLQLIPLQREQADHRDTEI
HHHHHHHCCCHHHHHHCCCEEECCCCEEEEEEEEECCCCCCCEEEEECCHHHCCCCCCHH
KGSIASASAIRRAALEQSEYFNAVPKASLKAIRNAKLTSWEDFWIMLNYRLLTSTPQELR
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHH
HIKGVTEGFENRILNLVDKSNSFTELMQKLKTKRYTYTRIQRSLTNILLNIQATPFNLTK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHH
TRLLATNQLGRIFIREAALGSVVMTKVTKEDFENNYAITKRADDLYQLVSPYQWGKGPII
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCCCCC
KKNVKE
CCCCCC
>Mature Secondary Structure
MQACAVIAEFNPFHNGHQYLLEQARKVTKADLVIVIMSGNFVQRGEPALINKWERARVAI
CCCEEEEECCCCCCCHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCHHHCCCCCEEEEE
NCGADLVVEIPTEYAIDSAKEFAHAGVEIAQKLGASFLAFGSENPDLDFENESKILDRQF
ECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHH
DQRAKKYNQNFAAQLFDDTAIMNSNDILGINYAYWNSKSKRGLQLIPLQREQADHRDTEI
HHHHHHHCCCHHHHHHCCCEEECCCCEEEEEEEEECCCCCCCEEEEECCHHHCCCCCCHH
KGSIASASAIRRAALEQSEYFNAVPKASLKAIRNAKLTSWEDFWIMLNYRLLTSTPQELR
CCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCEEEEEEEEEECCCHHHHH
HIKGVTEGFENRILNLVDKSNSFTELMQKLKTKRYTYTRIQRSLTNILLNIQATPFNLTK
HHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCCCCHH
TRLLATNQLGRIFIREAALGSVVMTKVTKEDFENNYAITKRADDLYQLVSPYQWGKGPII
HHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHCCCCCCCCCCC
KKNVKE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA