| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is yqeL [H]
Identifier: 116492476
GI number: 116492476
Start: 747167
End: 747523
Strand: Direct
Name: yqeL [H]
Synonym: PEPE_0708
Alternate gene names: 116492476
Gene position: 747167-747523 (Clockwise)
Preceding gene: 116492475
Following gene: 116492477
Centisome position: 40.78
GC content: 36.13
Gene sequence:
>357_bases TTGAACAATTTAGAAGAATTAGAATTACTAGTAAAAGCAGCAGATAGCAAACGAGCTGAAAATACAATCGTTTTAAATGT ACGTGAGGTTAGCACCTTAGCAGACTACTTTATGATTACAAGTGCTGATTCTAACCGCCAAGTAGCTGCCATTGCAGATG CTATTATTGAAAAGGCTAAGGAAAACCAGATCGAAATCCGTCGTATTGAAGGAAATCGTGCTGCAGAATGGATTTTGATT GACTTAGGAAATATTGTTATTAATGTTTTCCAAACGGATCAAAGAAAGTACTATAATCTGGAAAAGCTTTGGTCCCAAGC TGAAGCAGTTGAAACAACTGATTGGATTGCAGAATAA
Upstream 100 bases:
>100_bases CTTGCATACTTAATCGCTGGAAATAAGCCAGTTTTTCCAGCTACGATTGAAAGTTATAACGCATGGATCTCAAAATTTAA TTAAAACTAGGAGAAATAGA
Downstream 100 bases:
>100_bases TGATATATCAAAGCTTTGCGGAGTTATATGACCAACTTTTTGATGAAGATGAATACCAAAATTGGTTTGAATATACGCAA AAAGAAGTTGATTTAAGTCA
Product: Iojap family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 118; Mature: 118
Protein sequence:
>118_residues MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAKENQIEIRRIEGNRAAEWILI DLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE
Sequences:
>Translated_118_residues MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAKENQIEIRRIEGNRAAEWILI DLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE >Mature_118_residues MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAKENQIEIRRIEGNRAAEWILI DLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE
Specific function: Unknown
COG id: COG0799
COG function: function code S; Uncharacterized homolog of plant Iojap protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Iojap family [H]
Homologues:
Organism=Escherichia coli, GI87081768, Length=98, Percent_Identity=31.6326530612245, Blast_Score=79, Evalue=1e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004394 [H]
Pfam domain/function: PF02410 DUF143 [H]
EC number: NA
Molecular weight: Translated: 13498; Mature: 13498
Theoretical pI: Translated: 4.26; Mature: 4.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 1.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAK CCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHC ENQIEIRRIEGNRAAEWILIDLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE CCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCHHHCCHHHHHHHHHHHCCHHHHCC >Mature Secondary Structure MNNLEELELLVKAADSKRAENTIVLNVREVSTLADYFMITSADSNRQVAAIADAIIEKAK CCCHHHHHHHHHHHCCCCCCCEEEEEHHHHHHHHHHHEEECCCCCCHHHHHHHHHHHHHC ENQIEIRRIEGNRAAEWILIDLGNIVINVFQTDQRKYYNLEKLWSQAEAVETTDWIAE CCCEEEEEECCCCCEEEEEEEECCCEEEEEECCCHHHCCHHHHHHHHHHHCCHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]