| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is nadD [H]
Identifier: 116492474
GI number: 116492474
Start: 745908
End: 746552
Strand: Direct
Name: nadD [H]
Synonym: PEPE_0706
Alternate gene names: 116492474
Gene position: 745908-746552 (Clockwise)
Preceding gene: 116492473
Following gene: 116492475
Centisome position: 40.71
GC content: 37.36
Gene sequence:
>645_bases TTGATAGCAACAAAATCTAAAACAGTTTCTGGAGTACAAGTAGAAGTGGTTGAAGAGCCATTAATACAAAAGAAAGGCAA GAAAATTGGCATTCTGGGAGGGACGTTTAATCCGCCTCACATTGCTCATTTATTAATTGCTGAACAAGTAGGAAGCCAGT TGGGACTGGATAAGGTGCTATTTATTCCAGATTTTATTCCACCACATGTTGATGAGAAAAAAACCATTCCTGCTGAGCAC CGAGTTGAAATGGTCTGCTTAGCTATTCAGGATAACCCACTGTTTGATTTAGATTTAATCGAAATTAATCGTGGTGGCTC AAGTTATTCGTACGATACGGTTAAAGAATTAAAACAACTACATCCGGAAAATGACTATTATTTTATTATTGGTGGTGACA TGGCGGACTATTTACCGACTTGGCATCGAATTGACGAATTAGTTAAAATGGTTCAATTTGTGGGTGTTGATCGGCCGAAA TATCAACGCCAAGAACAATATCCGATTATTTGGGTAGATGTTCCTAAGATGGACATTAGTTCCACCAAAATTAGAAAAAA CGTTAAGAATGGGTGTTCAATTAGGTATCAAGTGCCCGAAAGTGTCGAAAAGTATATAAAGGAGCACCGTTTATATGAGC AATAA
Upstream 100 bases:
>100_bases ACCATTGGACGGGTACTAGTGTTGTTTAAAGTTTCTTCGGAAGCGGATAAACGTGAAATTTCAGATACAGTTAAGAAGAT ATAGATAAAGGTGATTAATC
Downstream 100 bases:
>100_bases TGAAGAATTAATTTATCAAAAAAACTACGTGCCTTTTACGCGAGCAGAATTAATCGACGCTGTTTCTAAAAGTATTACCG GAAGTCGATTCGAACATGTT
Product: nicotinate-nucleotide adenylyltransferase
Products: NA
Alternate protein names: Deamido-NAD(+) diphosphorylase; Deamido-NAD(+) pyrophosphorylase; Nicotinate mononucleotide adenylyltransferase; NaMN adenylyltransferase [H]
Number of amino acids: Translated: 214; Mature: 214
Protein sequence:
>214_residues MIATKSKTVSGVQVEVVEEPLIQKKGKKIGILGGTFNPPHIAHLLIAEQVGSQLGLDKVLFIPDFIPPHVDEKKTIPAEH RVEMVCLAIQDNPLFDLDLIEINRGGSSYSYDTVKELKQLHPENDYYFIIGGDMADYLPTWHRIDELVKMVQFVGVDRPK YQRQEQYPIIWVDVPKMDISSTKIRKNVKNGCSIRYQVPESVEKYIKEHRLYEQ
Sequences:
>Translated_214_residues MIATKSKTVSGVQVEVVEEPLIQKKGKKIGILGGTFNPPHIAHLLIAEQVGSQLGLDKVLFIPDFIPPHVDEKKTIPAEH RVEMVCLAIQDNPLFDLDLIEINRGGSSYSYDTVKELKQLHPENDYYFIIGGDMADYLPTWHRIDELVKMVQFVGVDRPK YQRQEQYPIIWVDVPKMDISSTKIRKNVKNGCSIRYQVPESVEKYIKEHRLYEQ >Mature_214_residues MIATKSKTVSGVQVEVVEEPLIQKKGKKIGILGGTFNPPHIAHLLIAEQVGSQLGLDKVLFIPDFIPPHVDEKKTIPAEH RVEMVCLAIQDNPLFDLDLIEINRGGSSYSYDTVKELKQLHPENDYYFIIGGDMADYLPTWHRIDELVKMVQFVGVDRPK YQRQEQYPIIWVDVPKMDISSTKIRKNVKNGCSIRYQVPESVEKYIKEHRLYEQ
Specific function: Catalyzes the reversible adenylation of nicotinate mononucleotide (NaMN) to nicotinic acid adenine dinucleotide (NaAD) [H]
COG id: COG1057
COG function: function code H; Nicotinic acid mononucleotide adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the nadD family [H]
Homologues:
Organism=Escherichia coli, GI1786858, Length=208, Percent_Identity=32.6923076923077, Blast_Score=103, Evalue=1e-23,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR005248 - InterPro: IPR019450 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2; PF10362 DUF2432 [H]
EC number: =2.7.7.18 [H]
Molecular weight: Translated: 24588; Mature: 24588
Theoretical pI: Translated: 6.63; Mature: 6.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIATKSKTVSGVQVEVVEEPLIQKKGKKIGILGGTFNPPHIAHLLIAEQVGSQLGLDKVL CCCCCCCCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEE FIPDFIPPHVDEKKTIPAEHRVEMVCLAIQDNPLFDLDLIEINRGGSSYSYDTVKELKQL ECCCCCCCCCCCCCCCCHHHCEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHH HPENDYYFIIGGDMADYLPTWHRIDELVKMVQFVGVDRPKYQRQEQYPIIWVDVPKMDIS CCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCC STKIRKNVKNGCSIRYQVPESVEKYIKEHRLYEQ HHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCC >Mature Secondary Structure MIATKSKTVSGVQVEVVEEPLIQKKGKKIGILGGTFNPPHIAHLLIAEQVGSQLGLDKVL CCCCCCCCCCCEEEEEHHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHHHHCCCCEEE FIPDFIPPHVDEKKTIPAEHRVEMVCLAIQDNPLFDLDLIEINRGGSSYSYDTVKELKQL ECCCCCCCCCCCCCCCCHHHCEEEEEEEECCCCCEEEEEEEEECCCCCCCHHHHHHHHHH HPENDYYFIIGGDMADYLPTWHRIDELVKMVQFVGVDRPKYQRQEQYPIIWVDVPKMDIS CCCCCEEEEECCCHHHHCCCHHHHHHHHHHHHHHCCCCCHHHHCCCCCEEEEECCCCCCC STKIRKNVKNGCSIRYQVPESVEKYIKEHRLYEQ HHHHHHHHCCCCEEEEECHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12566566 [H]