| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is yqeG [H]
Identifier: 116492471
GI number: 116492471
Start: 743920
End: 744444
Strand: Direct
Name: yqeG [H]
Synonym: PEPE_0703
Alternate gene names: 116492471
Gene position: 743920-744444 (Clockwise)
Preceding gene: 116492469
Following gene: 116492472
Centisome position: 40.6
GC content: 34.29
Gene sequence:
>525_bases ATGAATATTTTTAAACCAACGTGGATGATTGAAAAAATATATAATTTATCTGCAAAAGATTTAAACCAAAAAGGAATTAC GACTGTCTTAACCGATTTAGATAATACGTTAATTGCCTGGAATAATCCGGATGGAACTCCCGAATTAAGACAATGGATCG AAGATCTAAAACAAGAAAATATTAGAGTAATCGTAGTTTCTAACAATAACCATGCTCGCGTTAAGAAAGCAGTTGAAGGC TTTGGACTTGAATTTGATTCAAGAGCTTTAAAACCATTGACTGTTGGTATTAATCGAGTGGTACGCAAAAATAAATTGGA TAAGAACTCCACCATTATGGTTGGAGACCAATTAATTACGGATATGGCCGCTGCAAATTTAGCTGGAGTGCGGGGAGTTT TAGTGAAACCGTTAATTGAAACGGACGCTTGGAATACTAAATTCAACCGTTTTTTGGAATTCTTTGTAAAGCGTTCTTTA AAAAAGAAGTATCCGGAATTAGTTTGGCATAAGGAGTTACAATAA
Upstream 100 bases:
>100_bases TGAAATAAAAGATTTAAGCTTGCAAGTATAGGTTGCTCTCTTTCCAAAAGAGTCTACTATCGTTTATAATTAGACAGATA GCATTTATGGGAGAAGATTA
Downstream 100 bases:
>100_bases ATGGACGAACAAAATGAATTACGTTGTATTGGTTGTGGAGCAATTCTACAAGTGACTGATAAAAAAGCGCCTGGATATAC ACCAGAATCAGCCTTAAAAA
Product: HAD superfamily hydrolase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 174; Mature: 174
Protein sequence:
>174_residues MNIFKPTWMIEKIYNLSAKDLNQKGITTVLTDLDNTLIAWNNPDGTPELRQWIEDLKQENIRVIVVSNNNHARVKKAVEG FGLEFDSRALKPLTVGINRVVRKNKLDKNSTIMVGDQLITDMAAANLAGVRGVLVKPLIETDAWNTKFNRFLEFFVKRSL KKKYPELVWHKELQ
Sequences:
>Translated_174_residues MNIFKPTWMIEKIYNLSAKDLNQKGITTVLTDLDNTLIAWNNPDGTPELRQWIEDLKQENIRVIVVSNNNHARVKKAVEG FGLEFDSRALKPLTVGINRVVRKNKLDKNSTIMVGDQLITDMAAANLAGVRGVLVKPLIETDAWNTKFNRFLEFFVKRSL KKKYPELVWHKELQ >Mature_174_residues MNIFKPTWMIEKIYNLSAKDLNQKGITTVLTDLDNTLIAWNNPDGTPELRQWIEDLKQENIRVIVVSNNNHARVKKAVEG FGLEFDSRALKPLTVGINRVVRKNKLDKNSTIMVGDQLITDMAAANLAGVRGVLVKPLIETDAWNTKFNRFLEFFVKRSL KKKYPELVWHKELQ
Specific function: Unknown
COG id: COG2179
COG function: function code R; Predicted hydrolase of the HAD superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR023214 - InterPro: IPR006439 - InterPro: IPR006549 - InterPro: IPR010021 [H]
Pfam domain/function: PF09419 DUF2010 [H]
EC number: NA
Molecular weight: Translated: 20019; Mature: 20019
Theoretical pI: Translated: 10.35; Mature: 10.35
Prosite motif: PS00678 WD_REPEATS_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNIFKPTWMIEKIYNLSAKDLNQKGITTVLTDLDNTLIAWNNPDGTPELRQWIEDLKQEN CCCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCC IRVIVVSNNNHARVKKAVEGFGLEFDSRALKPLTVGINRVVRKNKLDKNSTIMVGDQLIT EEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHH DMAAANLAGVRGVLVKPLIETDAWNTKFNRFLEFFVKRSLKKKYPELVWHKELQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNIFKPTWMIEKIYNLSAKDLNQKGITTVLTDLDNTLIAWNNPDGTPELRQWIEDLKQEN CCCCCHHHHHHHHHCCCHHHCCCCCHHHHHHHCCCEEEEECCCCCCHHHHHHHHHHHHCC IRVIVVSNNNHARVKKAVEGFGLEFDSRALKPLTVGINRVVRKNKLDKNSTIMVGDQLIT EEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEHHHHHH DMAAANLAGVRGVLVKPLIETDAWNTKFNRFLEFFVKRSLKKKYPELVWHKELQ HHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8969508; 9384377 [H]