| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492430
Identifier: 116492430
GI number: 116492430
Start: 700585
End: 701841
Strand: Direct
Name: 116492430
Synonym: PEPE_0661
Alternate gene names: NA
Gene position: 700585-701841 (Clockwise)
Preceding gene: 116492429
Following gene: 116492431
Centisome position: 38.23
GC content: 34.92
Gene sequence:
>1257_bases ATGGAAAGACCAACTAACAATTTTACGCCAATTCTATTAGGTAGTGATTTTAATGCTTATGGGATGGCTCGTTCATTTTA CGAAATTACAGGAAGACGTGTTCAAGCGTATGCCGGGACCGTGCTAGCACCCACACGTTTTACTAAAATCGTGAATGTTG ATATTATTCCTGGTTTTTCAGAAGACCCTGTTTTTATTGAATCAATGCGTAAAATTGCTAAAAAATACGAAAATTCTGAC GAGAAGGTTGTTTTACTAGGGATGGGCGATGGCTATGCTGAATTGATTTCAAAGCATAAAGAAGAGTTGTCAAAAACTTT CATCTGTCCCTACATCGATTATGATTTATTGAAACAATTGAATAATAAAGAACGTTTTTATTCAATTTGTGATGAATATA ATTTACCATATCCAGCAACCCATTTTATTACGAAGGCACAATATGAAAGTGGTGAGAAATTCATCTCACCTTTTGAATTT CCAGTTGCTTTGAAGCCAGCTGACAGTGTAGAATGGCTCGATATTCATTTTGAAGGTCGTAAAAAAGCTTTCAGAATTAA AACTCAAGCAGAACTTGATGAAGTCATTGGTAAAATCTATGACAATGGCTATACTTCTGATTTGATTTTACAAGATTTTA TTCCAGGTGATGATAGCAACATGCGAGTTTTGAATGCTTATGTTGATCAAAATCATCAAGTAAAAATGATGTGTTTAGGT CATCCATTATTGGAGGATCCAGCTCCATCAGCAATTGGAAACTACGTAGCAATTATTCCTGAATTTAACCAAGAAATTTA TGACACGGTTAAAAACTTTCTTGAAAGTATCAATTACGTTGGATATGCCAACTTTGATATGAAATATGACAGTCGGGATG GTAAGTTTAAATTATTTGAAATCAATATTCGTCAAGGCCGTAGTAGCTTCTTTGTTACATTAAATGGATACAACCTAGCT CGTTGGGTGGTTGAAGACCGAGTTAACAATGCGTTGGCTGATCGTGAAACTGTATACGCTAATGATGTTCCAGGCAACTG GAAGTTATGGTTGGGCGTTCCAGTTAAGGTCTTCAAAAAGTATGCTAAAAATAATGATGATAAGCAAAAGGCGCTTGAAC TAATTAACAATGATCAATATGGATTTACCGCTATCTACGATGAGGATATGAACTTTAAGCGTAGCTTATTAATGTGGTGG ATGAACCATAATTATGTTAAGAACTTTAGGAAGTATTTTAAGGAAAATAAGGGGTAA
Upstream 100 bases:
>100_bases CCGGAAAAGGTGAAGATCCATACCAAAAAGTTGGAGGGGTAGATACTCCTTGGCCAACTGATATGGGAGTAGCAGAAGAA GTGAAGAGGGGATTAAGTTA
Downstream 100 bases:
>100_bases GACCTGTGAAAAAATTCTTTACGATTATTGGTGGAATGGGGACTCCAGCAACTGAAAGTTACATTAGGTTATTAAATGCT AGAACTCCTACCCATCGCGA
Product: ATP-grasp protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFSEDPVFIESMRKIAKKYENSD EKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQLNNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEF PVALKPADSVEWLDIHFEGRKKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFEINIRQGRSSFFVTLNGYNLA RWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKKYAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWW MNHNYVKNFRKYFKENKG
Sequences:
>Translated_418_residues MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFSEDPVFIESMRKIAKKYENSD EKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQLNNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEF PVALKPADSVEWLDIHFEGRKKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFEINIRQGRSSFFVTLNGYNLA RWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKKYAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWW MNHNYVKNFRKYFKENKG >Mature_418_residues MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFSEDPVFIESMRKIAKKYENSD EKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQLNNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEF PVALKPADSVEWLDIHFEGRKKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFEINIRQGRSSFFVTLNGYNLA RWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKKYAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWW MNHNYVKNFRKYFKENKG
Specific function: Unknown
COG id: COG3919
COG function: function code R; Predicted ATP-grasp enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48602; Mature: 48602
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS50975 ATP_GRASP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFS CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCEECCCCEEEEEEEEEECCCC EDPVFIESMRKIAKKYENSDEKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQL CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHC NNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEFPVALKPADSVEWLDIHFEGR CCHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCHHCCCCCCCEEECCCCCCEEEEEEECCC KKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG CEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEC HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFE CCCCCCCCCCHHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEE INIRQGRSSFFVTLNGYNLARWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKK EEEECCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCHHHHHH YAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWWMNHNYVKNFRKYFKENKG HHCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC >Mature Secondary Structure MERPTNNFTPILLGSDFNAYGMARSFYEITGRRVQAYAGTVLAPTRFTKIVNVDIIPGFS CCCCCCCCCEEEECCCCCHHHHHHHHHHHCCCEEEECCCCEECCCCEEEEEEEEEECCCC EDPVFIESMRKIAKKYENSDEKVVLLGMGDGYAELISKHKEELSKTFICPYIDYDLLKQL CCCHHHHHHHHHHHHHCCCCCEEEEEECCCCHHHHHHHHHHHHHHEEECCCCCHHHHHHC NNKERFYSICDEYNLPYPATHFITKAQYESGEKFISPFEFPVALKPADSVEWLDIHFEGR CCHHHHHHHHHCCCCCCCHHHHEEEHHHCCCCHHCCCCCCCEEECCCCCCEEEEEEECCC KKAFRIKTQAELDEVIGKIYDNGYTSDLILQDFIPGDDSNMRVLNAYVDQNHQVKMMCLG CEEEEEEHHHHHHHHHHHHHCCCCCCHHHHHHCCCCCCCCEEEEEEECCCCCCEEEEEEC HPLLEDPAPSAIGNYVAIIPEFNQEIYDTVKNFLESINYVGYANFDMKYDSRDGKFKLFE CCCCCCCCCCHHCCEEEEEECCCHHHHHHHHHHHHHCCCCEEEEEEEEECCCCCCEEEEE INIRQGRSSFFVTLNGYNLARWVVEDRVNNALADRETVYANDVPGNWKLWLGVPVKVFKK EEEECCCCEEEEEEECCCHHHHHHHHHHHHHHCCCCEEEECCCCCCEEEEECCCHHHHHH YAKNNDDKQKALELINNDQYGFTAIYDEDMNFKRSLLMWWMNHNYVKNFRKYFKENKG HHCCCCHHHHHHHHHCCCCCCEEEEEECCCCHHHHHHHHHHCCHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA