| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Click here to switch to the map view.
The map label for this gene is 116492424
Identifier: 116492424
GI number: 116492424
Start: 694562
End: 694840
Strand: Direct
Name: 116492424
Synonym: PEPE_0654
Alternate gene names: NA
Gene position: 694562-694840 (Clockwise)
Preceding gene: 116492423
Following gene: 116492426
Centisome position: 37.9
GC content: 36.56
Gene sequence:
>279_bases ATGTTTATCACAACCGAAGGTATCAATGCCGGTTATACAATTAAGGACGTGGTTGAAGCAACCAGTAGCTTGATGTTAGC TTCCGAAGACATCGATAAGTACAATATGTTTGATCAACTATTTGATGAAGCAAAACAAAAGTTGAAAAAGAAAGCTGATT TGCTTGAAGGCGACGGAATTATCGGCTTAAAGTACAATACAGAAGTAGTAGAAGTCAATGGAGCACCCAAGTTTTTGGTA GTCCATGGTTATGGTACAGTAATCTTAATTGATAAATAG
Upstream 100 bases:
>100_bases ATTTTCAATGATTGTAACTGCGGTGATTGAAATTCGAACACGAATGCAAGAATTTGCTAAGCAACAAAAAGAGGAAGAAA AGCAGCAGGGGGAAAAATAA
Downstream 100 bases:
>100_bases AAACGACTAAGAAACAGGATTGTAAATCCTGTTTCTTTTTTCGATACTTAATTGATTTTTCTGTAACATATTAAAGGACT TATTAGCCACAATAATCGCT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 92; Mature: 92
Protein sequence:
>92_residues MFITTEGINAGYTIKDVVEATSSLMLASEDIDKYNMFDQLFDEAKQKLKKKADLLEGDGIIGLKYNTEVVEVNGAPKFLV VHGYGTVILIDK
Sequences:
>Translated_92_residues MFITTEGINAGYTIKDVVEATSSLMLASEDIDKYNMFDQLFDEAKQKLKKKADLLEGDGIIGLKYNTEVVEVNGAPKFLV VHGYGTVILIDK >Mature_92_residues MFITTEGINAGYTIKDVVEATSSLMLASEDIDKYNMFDQLFDEAKQKLKKKADLLEGDGIIGLKYNTEVVEVNGAPKFLV VHGYGTVILIDK
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10174; Mature: 10174
Theoretical pI: Translated: 4.45; Mature: 4.45
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.3 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFITTEGINAGYTIKDVVEATSSLMLASEDIDKYNMFDQLFDEAKQKLKKKADLLEGDGI CEEECCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE IGLKYNTEVVEVNGAPKFLVVHGYGTVILIDK EEEEECCEEEEECCCCCEEEEECCCEEEEEEC >Mature Secondary Structure MFITTEGINAGYTIKDVVEATSSLMLASEDIDKYNMFDQLFDEAKQKLKKKADLLEGDGI CEEECCCCCCCCCHHHHHHHHHHEEEECCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCE IGLKYNTEVVEVNGAPKFLVVHGYGTVILIDK EEEEECCEEEEECCCCCEEEEECCCEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA