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The map label for this gene is yidA [C]

Identifier: 116492421

GI number: 116492421

Start: 693323

End: 694144

Strand: Direct

Name: yidA [C]

Synonym: PEPE_0651

Alternate gene names: 116492421

Gene position: 693323-694144 (Clockwise)

Preceding gene: 116492419

Following gene: 116492422

Centisome position: 37.84

GC content: 33.58

Gene sequence:

>822_bases
ATGATAAAACTAATCGTTAGTGATTTAGATGAAACTTTAGTAGGACCAGATGGAAATGTTTCGGAAGAAAACATTGAAGC
TATTAAAAAAGCAACTCAAAAAGGAGTTAAGTTTGTCCCTAATACCGGACGTGGATTTGAATCGGTACAACCTTTATTAG
AAACTTTGGGGTTGAAAGGGAAAGCAAATGAATTTGTGATTTCATATAATGGTGGAGTAATCGTCGAAAATCAAAATTTT
GATGTAATCCAAGCTAATGCATTTTCATTTGAGCAAGCCACTCAGATTTTTGATATAACCAAGCAGCATTTGGAGAATTC
GACGCATATTTATACGTTAAATGATGTTTATGTATTTAATGAAGTTGAAGAAGATAATGAATATATTCGTAGTCGTGGGG
TCCGTACCATTAGATTTGAGCATGATAATCTGGATACATTAAAAGATGAACCAATTTTTAAAATAATTACGATGAATCCT
GATTTTAATAAGAGAAAACAGATTAAAGCAGAAGTACTAGATAAAGTTAATTTCGATGTGAATGCTACTTTTTCTTCAGA
CCGATATACTGAATTTAATTTAAAAGGTGTCGATAAGGGTCAAGCTAGTCTAGAACTTGGACGGCATTTAGGTATAAAAG
CGGATGAAATAATGGCATTGGGCGATAATAACAATGATGTAGCAATGCTCAAGAGTGTGGGACTTCCTGTGGTAGTTTCC
AATGCTAGTGCATCTGCTAAAGCAAATGCTAAATATATTGCTAAAGGAAATTATGAAACGGGTGTGGCTGAGGCAATTAA
TAAATTTGTATTAGGGGAATAG

Upstream 100 bases:

>100_bases
CCCAAAAATGAAATGGTTTACTTAAAAAGTTAATTATTATTTGAAAAGCGCTACCAAATTCGATAGGCTAGAGATATGTT
AGATTGTGAGGAAGAATTTT

Downstream 100 bases:

>100_bases
TAGCATGCAAAAAAAGACTTATTACCGAAGTTCGCTAATTTTACTGATCCTATCAACGATTATTATGATAATGACTTGGG
TGTCATCGTTGAGTAAAACG

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 273

Protein sequence:

>273_residues
MIKLIVSDLDETLVGPDGNVSEENIEAIKKATQKGVKFVPNTGRGFESVQPLLETLGLKGKANEFVISYNGGVIVENQNF
DVIQANAFSFEQATQIFDITKQHLENSTHIYTLNDVYVFNEVEEDNEYIRSRGVRTIRFEHDNLDTLKDEPIFKIITMNP
DFNKRKQIKAEVLDKVNFDVNATFSSDRYTEFNLKGVDKGQASLELGRHLGIKADEIMALGDNNNDVAMLKSVGLPVVVS
NASASAKANAKYIAKGNYETGVAEAINKFVLGE

Sequences:

>Translated_273_residues
MIKLIVSDLDETLVGPDGNVSEENIEAIKKATQKGVKFVPNTGRGFESVQPLLETLGLKGKANEFVISYNGGVIVENQNF
DVIQANAFSFEQATQIFDITKQHLENSTHIYTLNDVYVFNEVEEDNEYIRSRGVRTIRFEHDNLDTLKDEPIFKIITMNP
DFNKRKQIKAEVLDKVNFDVNATFSSDRYTEFNLKGVDKGQASLELGRHLGIKADEIMALGDNNNDVAMLKSVGLPVVVS
NASASAKANAKYIAKGNYETGVAEAINKFVLGE
>Mature_273_residues
MIKLIVSDLDETLVGPDGNVSEENIEAIKKATQKGVKFVPNTGRGFESVQPLLETLGLKGKANEFVISYNGGVIVENQNF
DVIQANAFSFEQATQIFDITKQHLENSTHIYTLNDVYVFNEVEEDNEYIRSRGVRTIRFEHDNLDTLKDEPIFKIITMNP
DFNKRKQIKAEVLDKVNFDVNATFSSDRYTEFNLKGVDKGQASLELGRHLGIKADEIMALGDNNNDVAMLKSVGLPVVVS
NASASAKANAKYIAKGNYETGVAEAINKFVLGE

Specific function: Catalyzes the dephosphorylation of the artificial chromogenic substrate p-nitrophenyl phosphate (pNPP) and of the natural substrates erythrose 4-phosphate and mannose 1-phosphate [H]

COG id: COG0561

COG function: function code R; Predicted hydrolases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the HAD-like hydrolase superfamily. Cof family [H]

Homologues:

Organism=Escherichia coli, GI2367265, Length=271, Percent_Identity=29.520295202952, Blast_Score=106, Evalue=2e-24,
Organism=Escherichia coli, GI48994981, Length=247, Percent_Identity=23.8866396761134, Blast_Score=69, Evalue=3e-13,
Organism=Escherichia coli, GI87081790, Length=273, Percent_Identity=22.7106227106227, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR023214
- InterPro:   IPR013200
- InterPro:   IPR006379
- InterPro:   IPR000150 [H]

Pfam domain/function: PF08282 Hydrolase_3 [H]

EC number: NA

Molecular weight: Translated: 30285; Mature: 30285

Theoretical pI: Translated: 4.71; Mature: 4.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
1.5 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKLIVSDLDETLVGPDGNVSEENIEAIKKATQKGVKFVPNTGRGFESVQPLLETLGLKG
CEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCCCC
KANEFVISYNGGVIVENQNFDVIQANAFSFEQATQIFDITKQHLENSTHIYTLNDVYVFN
CCCEEEEEECCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECEEEEEE
EVEEDNEYIRSRGVRTIRFEHDNLDTLKDEPIFKIITMNPDFNKRKQIKAEVLDKVNFDV
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCE
NATFSSDRYTEFNLKGVDKGQASLELGRHLGIKADEIMALGDNNNDVAMLKSVGLPVVVS
EEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHEEEECCCCCCEEEEECCCCCEEEE
NASASAKANAKYIAKGNYETGVAEAINKFVLGE
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCC
>Mature Secondary Structure
MIKLIVSDLDETLVGPDGNVSEENIEAIKKATQKGVKFVPNTGRGFESVQPLLETLGLKG
CEEEEEECCHHHHCCCCCCCCHHHHHHHHHHHHCCCEECCCCCCCHHHHHHHHHHHCCCC
KANEFVISYNGGVIVENQNFDVIQANAFSFEQATQIFDITKQHLENSTHIYTLNDVYVFN
CCCEEEEEECCCEEEECCCCCEEEECCCCHHHHHHHHHHHHHHCCCCCEEEEECEEEEEE
EVEEDNEYIRSRGVRTIRFEHDNLDTLKDEPIFKIITMNPDFNKRKQIKAEVLDKVNFDV
CCCHHHHHHHHCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCE
NATFSSDRYTEFNLKGVDKGQASLELGRHLGIKADEIMALGDNNNDVAMLKSVGLPVVVS
EEEECCCCEEEEEECCCCCCHHHHHHHHHCCCCHHHEEEECCCCCCEEEEECCCCCEEEE
NASASAKANAKYIAKGNYETGVAEAINKFVLGE
CCCCCCCCCCEEEECCCCCCCHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA