Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

Click here to switch to the map view.

The map label for this gene is mfpsA [H]

Identifier: 116492407

GI number: 116492407

Start: 669125

End: 670141

Strand: Direct

Name: mfpsA [H]

Synonym: PEPE_0613

Alternate gene names: 116492407

Gene position: 669125-670141 (Clockwise)

Preceding gene: 116492406

Following gene: 116492408

Centisome position: 36.52

GC content: 37.07

Gene sequence:

>1017_bases
ATGCCAATTAAGGTCAACATGTTTTCATCAGCTAGTAAGGTAAAGGGGCAAGGTGTCGGCAGTGCGTATGAAGAACTCAT
TCGTTTGTTGAAGACCCATTTTCCAAAGCAAATCGATGTTTCAATCAATAAATTTACTAAGGCTGATATTAGTCACTATC
ACACCATCGACCCTAATTTCTATTTATCAACCTTTTCTAAAAAAAGGGGAATTAAGGTCGGTTATGTGCACTTTTTACCG
GAAACGATTGAGGGAAGTTTAAATATTCCACAACCTTTCCGTTCTATTTTTTATAAATACATTATCTCGTTTTATAAGCG
AATGGATCATATTGTAGTGGTGAACCCCACATTTATTGATAAATTAGTTGCTTATGGGATTAGTCGGGATATTATTACTT
ATATTCCCAATTTTGTCCGTAAGAATGAATTTTACCGTTTTACAGAGGCAAATCGGGATGCGGTACGGGAACGTTTGGAG
GTTAATAACCGTTTTACCGTGCTAGGCATCGGACAAGTCCAAGAACGTAAAGGGGTTAAAGATTTTATCAAACTTGCGGA
GAATAACCCTGATAAGTATTTTATCTGGGCAGGAGGTTTTTCATTTGGTCGATTAACCGATGGATATGCCGATTTGAAGC
AGGTGGTTGATAATCCACCTCGTAATTTAAAATTTACGGGGATTGTAGATCGTAATGCGTTGGTAGAATACTATAATGCG
GCCGACCTATTTCTATTACCTTCATACAACGAGTTATTTCCAATGTCGGTTTTAGAAGCCTTTAGCTGTGGTGTTCCAGT
CATGTTGAGGGACTTAGAGTTGTATCATTCCATTATTAAGGGGTACTATATACCTACTCAAGATTATGAGGATATGAATA
CTCAACTCAAATTAGTATCAGAAGATAAAGAAAGGCTGAATAAGTTTAAGCAGCTATCAGACGAAGCTTCGGAAGAATAC
TCTGAAGACCATCTAGCTGATATATGGTTAGACTTTTATTCATCTTTGACCAAATAG

Upstream 100 bases:

>100_bases
AGTGCAATTAGTACACATACAGATTTAGAGTTAGACGAAGATTCTGAATAGAATCGGGGTTAAAATCAGAATAATTTTGT
TTAATGTTAGGGGTTAAGGT

Downstream 100 bases:

>100_bases
GGGGAGTTTATCTATGTCAAGGAGGAATAAAGTAGTCCTTGCGGTGATGATTCTAGCTGGTATTATAATTTTTGGCTTTT
CATTACGAAACGTTAATTTG

Product: glycosyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 338; Mature: 337

Protein sequence:

>338_residues
MPIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNFYLSTFSKKRGIKVGYVHFLP
ETIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFIDKLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLE
VNNRFTVLGIGQVQERKGVKDFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNA
ADLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVSEDKERLNKFKQLSDEASEEY
SEDHLADIWLDFYSSLTK

Sequences:

>Translated_338_residues
MPIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNFYLSTFSKKRGIKVGYVHFLP
ETIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFIDKLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLE
VNNRFTVLGIGQVQERKGVKDFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNA
ADLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVSEDKERLNKFKQLSDEASEEY
SEDHLADIWLDFYSSLTK
>Mature_337_residues
PIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNFYLSTFSKKRGIKVGYVHFLPE
TIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFIDKLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLEV
NNRFTVLGIGQVQERKGVKDFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNAA
DLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVSEDKERLNKFKQLSDEASEEYS
EDHLADIWLDFYSSLTK

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG0438

COG function: function code M; Glycosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 1 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001296
- InterPro:   IPR000368 [H]

Pfam domain/function: PF00534 Glycos_transf_1; PF00862 Sucrose_synth [H]

EC number: =2.4.1.246 [H]

Molecular weight: Translated: 39266; Mature: 39135

Theoretical pI: Translated: 7.74; Mature: 7.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNF
CCEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCEEECCCCC
YLSTFSKKRGIKVGYVHFLPETIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFID
EEEHHHHCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHH
KLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLEVNNRFTVLGIGQVQERKGVK
HHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCEEEEECCHHHHHCCHH
DFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNA
HHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCC
ADLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVS
CCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEH
EDKERLNKFKQLSDEASEEYSEDHLADIWLDFYSSLTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PIKVNMFSSASKVKGQGVGSAYEELIRLLKTHFPKQIDVSINKFTKADISHYHTIDPNF
CEEEEECCCCHHHCCCCCCHHHHHHHHHHHHHCCCEEEEEHHHHHHHHCCCEEECCCCC
YLSTFSKKRGIKVGYVHFLPETIEGSLNIPQPFRSIFYKYIISFYKRMDHIVVVNPTFID
EEEHHHHCCCCEEEEEEECCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCEEEECHHHHH
KLVAYGISRDIITYIPNFVRKNEFYRFTEANRDAVRERLEVNNRFTVLGIGQVQERKGVK
HHHHHCCCHHHHHHHHHHHHCCCCEEECCCCHHHHHHHHHCCCCEEEEECCHHHHHCCHH
DFIKLAENNPDKYFIWAGGFSFGRLTDGYADLKQVVDNPPRNLKFTGIVDRNALVEYYNA
HHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEEEEECCHHHHHHHCC
ADLFLLPSYNELFPMSVLEAFSCGVPVMLRDLELYHSIIKGYYIPTQDYEDMNTQLKLVS
CCEEEECCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEEEH
EDKERLNKFKQLSDEASEEYSEDHLADIWLDFYSSLTK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11743193; 11743194 [H]