| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492308
Identifier: 116492308
GI number: 116492308
Start: 559792
End: 559923
Strand: Reverse
Name: 116492308
Synonym: PEPE_0508
Alternate gene names: NA
Gene position: 559923-559792 (Counterclockwise)
Preceding gene: 116492310
Following gene: 116492307
Centisome position: 30.56
GC content: 24.24
Gene sequence:
>132_bases ATGAAAAGATTTGGACTTTGGTCAAAATTATCAATTATCATTTCTATATCTCAACTTTTATTAGCCATTTTTAAAGAAAT TCAAAACTATAACAAATCTAAAAAACATCCTTCGAAAAATAAGAGAGGATGA
Upstream 100 bases:
>100_bases ATTTTAAAAAGAATGGCACAATCGAATAACTTGTATGCAAATATTCAATTGCCTATAATTAGATTTAGAAGAATGCAATT TAGATAATGGAGGATTTCAT
Downstream 100 bases:
>100_bases TGTTTTATGCATTGGTTATGGGTTTTAATTATTGGTGCCATCATTGGTGCTATTGCTGGAGCAATTACTAGCAAAGGAAA ATCAATGGGGTGGATTGCTA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 43; Mature: 43
Protein sequence:
>43_residues MKRFGLWSKLSIIISISQLLLAIFKEIQNYNKSKKHPSKNKRG
Sequences:
>Translated_43_residues MKRFGLWSKLSIIISISQLLLAIFKEIQNYNKSKKHPSKNKRG >Mature_43_residues MKRFGLWSKLSIIISISQLLLAIFKEIQNYNKSKKHPSKNKRG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 5045; Mature: 5045
Theoretical pI: Translated: 11.56; Mature: 11.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKRFGLWSKLSIIISISQLLLAIFKEIQNYNKSKKHPSKNKRG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure MKRFGLWSKLSIIISISQLLLAIFKEIQNYNKSKKHPSKNKRG CCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA