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The map label for this gene is pinQ [H]

Identifier: 116492297

GI number: 116492297

Start: 551558

End: 552118

Strand: Direct

Name: pinQ [H]

Synonym: PEPE_0497

Alternate gene names: 116492297

Gene position: 551558-552118 (Clockwise)

Preceding gene: 116492294

Following gene: 116492300

Centisome position: 30.1

GC content: 39.93

Gene sequence:

>561_bases
ATGAAATATGGCTATGCGCGGGTCAGTACCACTGATCAAAAATTAGCAACTCAAATTGAGCTATTACAAGTAGCCGGTGC
CCAAAAAATTTTCCAAGAAAAGTATACCGGCACAACTACTGAACGACCAGAGTTCCAAAAACTATTGCGGGTTCTAAAAA
TAGGTGATACTTTAATTGTGACTAAGTTAGATCGGTTTGCACGGAACACGCGCGAGGCATTAGCCATTATCCAAGAGTTG
TTTAAAGAAAATGTCAAAGTTAATATTTTGAATATGGGGTTAATTGATAATACGCCGACTGGCCAACTCATTTTTACAAT
ATTTAGTGCCTTTGCACAGTTTGAACGCGATATGATTGTCACACGCACACAAGAAGGTAAATTGTATGCCAAGCAACACG
ATCCGTTGTTTCGGGAAGGGCGACCGAAAACGTATTCTGATGAACAGATCAGATTTGCCTACGAATTACGAAAACAGGGC
ATGACCTATAAAATGATTGAACGAAAGACGGGGATTAGTAAACGCACGCAGCAGCGACGGTTTAAGTTAATTGAAAAATA
G

Upstream 100 bases:

>100_bases
AAGGTCACAACTTAACAGTTGTGGCCTGTTTTTTGATGCTGTATAATTAAAGGGTTAGAACCGTGCCATTACTTAATGAC
ATAAGTTAGGAGATAAAAGA

Downstream 100 bases:

>100_bases
GTATGCTAAGAATTGCAAAAGATTGATCCTAAAATTACTCAAGATGGCTTAAATAGTTTAAAAATGAAGACTCAAATAAC
CCCTCATATAGAAGAATTAT

Product: site-specific recombinase, DNA invertase Pin related proteins

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 186; Mature: 186

Protein sequence:

>186_residues
MKYGYARVSTTDQKLATQIELLQVAGAQKIFQEKYTGTTTERPEFQKLLRVLKIGDTLIVTKLDRFARNTREALAIIQEL
FKENVKVNILNMGLIDNTPTGQLIFTIFSAFAQFERDMIVTRTQEGKLYAKQHDPLFREGRPKTYSDEQIRFAYELRKQG
MTYKMIERKTGISKRTQQRRFKLIEK

Sequences:

>Translated_186_residues
MKYGYARVSTTDQKLATQIELLQVAGAQKIFQEKYTGTTTERPEFQKLLRVLKIGDTLIVTKLDRFARNTREALAIIQEL
FKENVKVNILNMGLIDNTPTGQLIFTIFSAFAQFERDMIVTRTQEGKLYAKQHDPLFREGRPKTYSDEQIRFAYELRKQG
MTYKMIERKTGISKRTQQRRFKLIEK
>Mature_186_residues
MKYGYARVSTTDQKLATQIELLQVAGAQKIFQEKYTGTTTERPEFQKLLRVLKIGDTLIVTKLDRFARNTREALAIIQEL
FKENVKVNILNMGLIDNTPTGQLIFTIFSAFAQFERDMIVTRTQEGKLYAKQHDPLFREGRPKTYSDEQIRFAYELRKQG
MTYKMIERKTGISKRTQQRRFKLIEK

Specific function: Unknown

COG id: COG1961

COG function: function code L; Site-specific recombinases, DNA invertase Pin homologs

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the site-specific recombinase resolvase family [H]

Homologues:

Organism=Escherichia coli, GI1787638, Length=181, Percent_Identity=36.4640883977901, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787827, Length=181, Percent_Identity=36.4640883977901, Blast_Score=115, Evalue=2e-27,
Organism=Escherichia coli, GI1787404, Length=126, Percent_Identity=42.0634920634921, Blast_Score=109, Evalue=1e-25,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR006118
- InterPro:   IPR006119
- InterPro:   IPR006120 [H]

Pfam domain/function: PF02796 HTH_7; PF00239 Resolvase [H]

EC number: NA

Molecular weight: Translated: 21810; Mature: 21810

Theoretical pI: Translated: 10.56; Mature: 10.56

Prosite motif: PS00397 RECOMBINASES_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKYGYARVSTTDQKLATQIELLQVAGAQKIFQEKYTGTTTERPEFQKLLRVLKIGDTLIV
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH
TKLDRFARNTREALAIIQELFKENVKVNILNMGLIDNTPTGQLIFTIFSAFAQFERDMIV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEE
TRTQEGKLYAKQHDPLFREGRPKTYSDEQIRFAYELRKQGMTYKMIERKTGISKRTQQRR
EECCCCCEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
FKLIEK
HHHCCC
>Mature Secondary Structure
MKYGYARVSTTDQKLATQIELLQVAGAQKIFQEKYTGTTTERPEFQKLLRVLKIGDTLIV
CCCCCEECCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCHHHH
TKLDRFARNTREALAIIQELFKENVKVNILNMGLIDNTPTGQLIFTIFSAFAQFERDMIV
HHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHEE
TRTQEGKLYAKQHDPLFREGRPKTYSDEQIRFAYELRKQGMTYKMIERKTGISKRTQQRR
EECCCCCEEECCCCCHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHH
FKLIEK
HHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]