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The map label for this gene is padR [H]

Identifier: 116492293

GI number: 116492293

Start: 545561

End: 546091

Strand: Direct

Name: padR [H]

Synonym: PEPE_0492

Alternate gene names: 116492293

Gene position: 545561-546091 (Clockwise)

Preceding gene: 116492292

Following gene: 116492294

Centisome position: 29.77

GC content: 35.4

Gene sequence:

>531_bases
ATGCCAAGACCAAGAGTTTTACCGTACATTATTTTAGGATTATTAAATAAAAATGGAACGATGTCTGGTAAAGATATGAT
TAGTGAGTTTAAAACTGATATAAGTGAGTTTTGGACGGTATCACATAGTCAGCTCTATCCCGAATTACAACGGATGGTGG
ATGAAAAGCAGATTAAGGTGGCTGAAGATGTGGAAGTTAAGGATCGGAAAGTCATCAATTACGTGATTGAAGCTAAAGGG
CAAGAGACGCTAAAAAGATGGCTTGCCGAACCGATTACTTTAAAGAATGATGAATTAACATCATTGAAACTTTATTGTAT
TTCAGATCAACGAGCCCCAATCTTGCAACAAATTTTAAAACAGTGTTTGGCGTTGCATCAACAAAAGGTAGTTCATTTAA
AAGCTCGAAAAGAATTATTATTTGGAGACGAATCAGCGATTAAAGGTAATTACGGACACTATTTGATTTTATCCAGAGCC
ATCGAACGTGAATCGGACTATGTTAATTGGCTCCAATCTAAAATAAACTAA

Upstream 100 bases:

>100_bases
CATACGAAGGTATGACTGACGACATCCGCGCTGGTAAGTACTTTGATGAAAACTACAAACGCATTAACAAATAAAGTTTA
GATTTGGAGAGAAACCAATA

Downstream 100 bases:

>100_bases
TAAAAAGCGTTGAATCTAAGCTGAGTTAGGCTGATAATTCAACGCTTTTTTTGATGGTTTGTTGTTGTGAAATAGCCCAA
AGAATTAGTAACAAAATAGT

Product: PadR family transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 176; Mature: 175

Protein sequence:

>176_residues
MPRPRVLPYIILGLLNKNGTMSGKDMISEFKTDISEFWTVSHSQLYPELQRMVDEKQIKVAEDVEVKDRKVINYVIEAKG
QETLKRWLAEPITLKNDELTSLKLYCISDQRAPILQQILKQCLALHQQKVVHLKARKELLFGDESAIKGNYGHYLILSRA
IERESDYVNWLQSKIN

Sequences:

>Translated_176_residues
MPRPRVLPYIILGLLNKNGTMSGKDMISEFKTDISEFWTVSHSQLYPELQRMVDEKQIKVAEDVEVKDRKVINYVIEAKG
QETLKRWLAEPITLKNDELTSLKLYCISDQRAPILQQILKQCLALHQQKVVHLKARKELLFGDESAIKGNYGHYLILSRA
IERESDYVNWLQSKIN
>Mature_175_residues
PRPRVLPYIILGLLNKNGTMSGKDMISEFKTDISEFWTVSHSQLYPELQRMVDEKQIKVAEDVEVKDRKVINYVIEAKGQ
ETLKRWLAEPITLKNDELTSLKLYCISDQRAPILQQILKQCLALHQQKVVHLKARKELLFGDESAIKGNYGHYLILSRAI
ERESDYVNWLQSKIN

Specific function: Negative transcriptional regulator of padC phenolic acid decarboxylase [H]

COG id: COG1695

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018309
- InterPro:   IPR005149
- InterPro:   IPR011991 [H]

Pfam domain/function: PF03551 PadR; PF10400 Vir_act_alpha_C [H]

EC number: NA

Molecular weight: Translated: 20469; Mature: 20338

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.4 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRPRVLPYIILGLLNKNGTMSGKDMISEFKTDISEFWTVSHSQLYPELQRMVDEKQIKV
CCCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AEDVEVKDRKVINYVIEAKGQETLKRWLAEPITLKNDELTSLKLYCISDQRAPILQQILK
HCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
QCLALHQQKVVHLKARKELLFGDESAIKGNYGHYLILSRAIERESDYVNWLQSKIN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PRPRVLPYIILGLLNKNGTMSGKDMISEFKTDISEFWTVSHSQLYPELQRMVDEKQIKV
CCCHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
AEDVEVKDRKVINYVIEAKGQETLKRWLAEPITLKNDELTSLKLYCISDQRAPILQQILK
HCCCCHHHHHHHHHHHHCCCHHHHHHHHCCCCCCCCCCCCEEEEEEECCCCCHHHHHHHH
QCLALHQQKVVHLKARKELLFGDESAIKGNYGHYLILSRAIERESDYVNWLQSKIN
HHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8973323; 9384377 [H]