| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is 116492216
Identifier: 116492216
GI number: 116492216
Start: 461396
End: 461788
Strand: Reverse
Name: 116492216
Synonym: PEPE_0413
Alternate gene names: NA
Gene position: 461788-461396 (Counterclockwise)
Preceding gene: 116492221
Following gene: 116492211
Centisome position: 25.2
GC content: 32.06
Gene sequence:
>393_bases ATGAGTAATATCCTTATCAGTCTTTTGACATTGATAGCTATTTTATTTTGTTGGAAATCGCTTTATCAAAATCCAGCTAG ACAGATAGCTGGACGAAAATTTTATATTACCAAAGAATATCCTACTACTTATGCTAATGCTGTCGATAACTTAGACCATG CTACTATTCAATTTAAAAAGGATGGTAGTATCAAGTATGAAGTAATTAATGATTATTCCAATGATAAATGGACAATCAAT GGCCACAAAGTTGAAACGGGTAACATTGCTGATCCCGATCGCACTTATATTGATCTGAATGATGAACGTCAAATTGACGG CCACACCTTCTATGAAATAAAATTTGAAGATGATATAAACATTTTCCAATATTTCCTAGTTTCAGAGAACTAA
Upstream 100 bases:
>100_bases TACCTATTTTATAAAAAAATATTGCTAAAAGTAACTAACTAATCTACCATTAGAGGTGTGAATACATCGGATTTGTAGGT ACTAATTTAGGAGGTTTCAA
Downstream 100 bases:
>100_bases TACTTTACAATTTAATTAAAACTATAAAAAACTTCAGAAAGTTAGTCTTTCTGAAGTTTTTTATTTTGGTAATCTATTTT GTTTAGTTTCTGACACTAAA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 130; Mature: 129
Protein sequence:
>130_residues MSNILISLLTLIAILFCWKSLYQNPARQIAGRKFYITKEYPTTYANAVDNLDHATIQFKKDGSIKYEVINDYSNDKWTIN GHKVETGNIADPDRTYIDLNDERQIDGHTFYEIKFEDDINIFQYFLVSEN
Sequences:
>Translated_130_residues MSNILISLLTLIAILFCWKSLYQNPARQIAGRKFYITKEYPTTYANAVDNLDHATIQFKKDGSIKYEVINDYSNDKWTIN GHKVETGNIADPDRTYIDLNDERQIDGHTFYEIKFEDDINIFQYFLVSEN >Mature_129_residues SNILISLLTLIAILFCWKSLYQNPARQIAGRKFYITKEYPTTYANAVDNLDHATIQFKKDGSIKYEVINDYSNDKWTING HKVETGNIADPDRTYIDLNDERQIDGHTFYEIKFEDDINIFQYFLVSEN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 15226; Mature: 15095
Theoretical pI: Translated: 4.71; Mature: 4.71
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNILISLLTLIAILFCWKSLYQNPARQIAGRKFYITKEYPTTYANAVDNLDHATIQFKK CCHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEEEC DGSIKYEVINDYSNDKWTINGHKVETGNIADPDRTYIDLNDERQIDGHTFYEIKFEDDIN CCCEEEEEECCCCCCEEEECCEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCC IFQYFLVSEN EEEEEEEECC >Mature Secondary Structure SNILISLLTLIAILFCWKSLYQNPARQIAGRKFYITKEYPTTYANAVDNLDHATIQFKK CHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEEEEEECCCCHHHHHHCCCCCEEEEEEC DGSIKYEVINDYSNDKWTINGHKVETGNIADPDRTYIDLNDERQIDGHTFYEIKFEDDIN CCCEEEEEECCCCCCEEEECCEEEEECCCCCCCCEEEECCCCCCCCCCEEEEEEECCCCC IFQYFLVSEN EEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA