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The map label for this gene is ydeY [C]

Identifier: 116492082

GI number: 116492082

Start: 323676

End: 324587

Strand: Reverse

Name: ydeY [C]

Synonym: PEPE_0278

Alternate gene names: 116492082

Gene position: 324587-323676 (Counterclockwise)

Preceding gene: 116492083

Following gene: 116492081

Centisome position: 17.71

GC content: 40.68

Gene sequence:

>912_bases
ATGAACTTAATCACATCTTCTATTGGACAAGGGCTACTCTGGGGCCTTCTAGGGGTAGGACTATTTCTCACCTTTAGAAT
TTTAGATTTTCCTGATATGACGGTTGAAGGAACTTTTCCACTTGGCGCAGCCGTTAGCGTTACTGCCATCACTAACGGAC
TCAATCCACTGACCGCGACATTACTTGCTTTTCTAGCTGGTATGCTTGCTGGGCTAATTACTGGCCTCCTTTACACCAAA
GGCCGTATTCCAATCCTATTAGCCGGAATTTTAGTCATGACGGCTTGCTACTCCATTAATTTGCGGATTATGGGAACTTC
TAACGTTTCACTCCTAGGAAAACAAACCTTATTCAGTGGACAATTCTTTGCGTCACTACCTAAATTTTTTGATAGCGTAG
TCCTCGGACTGATCATCATTACCATTGTTGTAGCTATACTGGCCCTCTTTTTACAAACTAATCTTGGGCAAGCTTTTATT
GCCACAGGTGATAATGAAAAAATGGCGAAATCCTTAGGGATCAATACCGATCAAATGAAAAATATGGGACTTATGGTTTC
AAACGGTATGATTGCAGTATCTGGTGCACTCATCGCTCAAAGTGATGGATACGCAGATGTTAATATGGGGATTGGAATTA
TCGTAATTGGCTTGGCTTCCATTATTATTGGAGAAGTAGTTTTTGGCGAATTAACCATGAATCAACGTTTAGTAGCCGTA
GTATGTGGAAGTATTATTTATCGTTTCGTCCTCCTACTGGTACTCAAGGCTGGATTCAATACTAACGATTTAAACCTTAT
CTCATCGTTGGTCTTAGCGCTCTGCTTAATGCTACCAACGTTACGGAAAAAATTTCATTTTGACCGAATTTTAAAACATG
GGGTAGCCATGCCAACTAAGGAGCGTGATTAA

Upstream 100 bases:

>100_bases
ATGGTGATTTAACTATTAACCTTAAACAAGCTCAAAAACTAGGTATCAAGATTCCTAAAGATTTAATGCAAGAAGCACAA
AAGAAAGGGGAGTTAATTAA

Downstream 100 bases:

>100_bases
AATGGAACGACCTGTTATTTTAGAACTTAAAAATGTTTCAGTCTATGTTAATCGCCACACGACTGAAGAAATTCAAATTT
TGAAAAACATTAATCTAAAA

Product: ribose/xylose/arabinose/galactoside ABC-type transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 303; Mature: 303

Protein sequence:

>303_residues
MNLITSSIGQGLLWGLLGVGLFLTFRILDFPDMTVEGTFPLGAAVSVTAITNGLNPLTATLLAFLAGMLAGLITGLLYTK
GRIPILLAGILVMTACYSINLRIMGTSNVSLLGKQTLFSGQFFASLPKFFDSVVLGLIIITIVVAILALFLQTNLGQAFI
ATGDNEKMAKSLGINTDQMKNMGLMVSNGMIAVSGALIAQSDGYADVNMGIGIIVIGLASIIIGEVVFGELTMNQRLVAV
VCGSIIYRFVLLLVLKAGFNTNDLNLISSLVLALCLMLPTLRKKFHFDRILKHGVAMPTKERD

Sequences:

>Translated_303_residues
MNLITSSIGQGLLWGLLGVGLFLTFRILDFPDMTVEGTFPLGAAVSVTAITNGLNPLTATLLAFLAGMLAGLITGLLYTK
GRIPILLAGILVMTACYSINLRIMGTSNVSLLGKQTLFSGQFFASLPKFFDSVVLGLIIITIVVAILALFLQTNLGQAFI
ATGDNEKMAKSLGINTDQMKNMGLMVSNGMIAVSGALIAQSDGYADVNMGIGIIVIGLASIIIGEVVFGELTMNQRLVAV
VCGSIIYRFVLLLVLKAGFNTNDLNLISSLVLALCLMLPTLRKKFHFDRILKHGVAMPTKERD
>Mature_303_residues
MNLITSSIGQGLLWGLLGVGLFLTFRILDFPDMTVEGTFPLGAAVSVTAITNGLNPLTATLLAFLAGMLAGLITGLLYTK
GRIPILLAGILVMTACYSINLRIMGTSNVSLLGKQTLFSGQFFASLPKFFDSVVLGLIIITIVVAILALFLQTNLGQAFI
ATGDNEKMAKSLGINTDQMKNMGLMVSNGMIAVSGALIAQSDGYADVNMGIGIIVIGLASIIIGEVVFGELTMNQRLVAV
VCGSIIYRFVLLLVLKAGFNTNDLNLISSLVLALCLMLPTLRKKFHFDRILKHGVAMPTKERD

Specific function: Probably Part Of The Binding-Protein-Dependent Transport System Ego/Ydeyz. Probably Responsible For The Translocation Of The Substrate Across The Membrane. [C]

COG id: COG4120

COG function: function code R; ABC-type uncharacterized transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001851 [H]

Pfam domain/function: PF02653 BPD_transp_2 [H]

EC number: NA

Molecular weight: Translated: 32233; Mature: 32233

Theoretical pI: Translated: 9.19; Mature: 9.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
4.6 %Met     (Translated Protein)
5.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
4.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNLITSSIGQGLLWGLLGVGLFLTFRILDFPDMTVEGTFPLGAAVSVTAITNGLNPLTAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEHHHHHCCCCHHHHH
LLAFLAGMLAGLITGLLYTKGRIPILLAGILVMTACYSINLRIMGTSNVSLLGKQTLFSG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCC
QFFASLPKFFDSVVLGLIIITIVVAILALFLQTNLGQAFIATGDNEKMAKSLGINTDQMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCHHHHH
NMGLMVSNGMIAVSGALIAQSDGYADVNMGIGIIVIGLASIIIGEVVFGELTMNQRLVAV
CCCEEEECCEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VCGSIIYRFVLLLVLKAGFNTNDLNLISSLVLALCLMLPTLRKKFHFDRILKHGVAMPTK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ERD
CCC
>Mature Secondary Structure
MNLITSSIGQGLLWGLLGVGLFLTFRILDFPDMTVEGTFPLGAAVSVTAITNGLNPLTAT
CCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCCEEHHHHHCCCCHHHHH
LLAFLAGMLAGLITGLLYTKGRIPILLAGILVMTACYSINLRIMGTSNVSLLGKQTLFSG
HHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHHCC
QFFASLPKFFDSVVLGLIIITIVVAILALFLQTNLGQAFIATGDNEKMAKSLGINTDQMK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCHHHHHHHCCCHHHHH
NMGLMVSNGMIAVSGALIAQSDGYADVNMGIGIIVIGLASIIIGEVVFGELTMNQRLVAV
CCCEEEECCEEEEECEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH
VCGSIIYRFVLLLVLKAGFNTNDLNLISSLVLALCLMLPTLRKKFHFDRILKHGVAMPTK
HHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
ERD
CCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9823893 [H]