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The map label for this gene is yrxA [H]

Identifier: 116492022

GI number: 116492022

Start: 255222

End: 255731

Strand: Direct

Name: yrxA [H]

Synonym: PEPE_0214

Alternate gene names: 116492022

Gene position: 255222-255731 (Clockwise)

Preceding gene: 116492019

Following gene: 116492023

Centisome position: 13.93

GC content: 38.24

Gene sequence:

>510_bases
ATGAAAATTAATCGAAAAGTAGCTATCAAAAATCAACTATTAGAAACTAAAACACCAATCAAAGCAGGCACATTGGCTAA
ACAATTTGAGGTTAGCCGACAAACTATTGTTGGAGATATAGCTTTGTTGCGTGCGCAAGGGGAGCCGATTATTTCAACTT
CGAGAGGCTATGAATATGCCAAAAATCATCGATTTGAAGAAATGATCGTTTGTCGTCATTTCCCCGATCAAGCAGAGCGA
GAAATGGAACTAATTGTTAAAGAACAGGTGACGATCAAAGACGTTATGATTGACCACCCACTTTACGGACAGCTAGTGGG
ACAAATCCGTGTGCAAAATAGCAATGATGTCAAACAATTTATGCAACATGTACGGGAAGCTAAAGGGCACTTGCTATCTG
AATTAACCGATGGTATCCACAGTCATACTTTAGCAGCGGATAAGATGGAAAATATCGAAAAAGCTAAGGAACAGTTAAAA
AAAGTGGGAATTCTATACAAAGAAGGTTAA

Upstream 100 bases:

>100_bases
ACAACATAAAACAATATTTATCAATGATTTATTTAAAATTAATGTCTTGACACTTGTAACGGGGATTTTCTGATAAAATA
TACTCAAGGAGCAATGACTT

Downstream 100 bases:

>100_bases
CTAAAGGATTTTTACTGGATTTTGTAGTATAGTACAGCCAAATCATTTTGACGGAGGGATGAAATGTATCGAATTGTACT
CATCATTTTTATAATTTATG

Product: small molecule binding protein

Products: NA

Alternate protein names: ORF1 [H]

Number of amino acids: Translated: 169; Mature: 169

Protein sequence:

>169_residues
MKINRKVAIKNQLLETKTPIKAGTLAKQFEVSRQTIVGDIALLRAQGEPIISTSRGYEYAKNHRFEEMIVCRHFPDQAER
EMELIVKEQVTIKDVMIDHPLYGQLVGQIRVQNSNDVKQFMQHVREAKGHLLSELTDGIHSHTLAADKMENIEKAKEQLK
KVGILYKEG

Sequences:

>Translated_169_residues
MKINRKVAIKNQLLETKTPIKAGTLAKQFEVSRQTIVGDIALLRAQGEPIISTSRGYEYAKNHRFEEMIVCRHFPDQAER
EMELIVKEQVTIKDVMIDHPLYGQLVGQIRVQNSNDVKQFMQHVREAKGHLLSELTDGIHSHTLAADKMENIEKAKEQLK
KVGILYKEG
>Mature_169_residues
MKINRKVAIKNQLLETKTPIKAGTLAKQFEVSRQTIVGDIALLRAQGEPIISTSRGYEYAKNHRFEEMIVCRHFPDQAER
EMELIVKEQVTIKDVMIDHPLYGQLVGQIRVQNSNDVKQFMQHVREAKGHLLSELTDGIHSHTLAADKMENIEKAKEQLK
KVGILYKEG

Specific function: Unknown

COG id: COG1827

COG function: function code R; Predicted small molecule binding protein (contains 3H domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004173
- InterPro:   IPR013196
- InterPro:   IPR011991
- ProDom:   PD469575 [H]

Pfam domain/function: PF02829 3H; PF08279 HTH_11 [H]

EC number: NA

Molecular weight: Translated: 19332; Mature: 19332

Theoretical pI: Translated: 9.38; Mature: 9.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKINRKVAIKNQLLETKTPIKAGTLAKQFEVSRQTIVGDIALLRAQGEPIISTSRGYEYA
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHH
KNHRFEEMIVCRHFPDQAEREMELIVKEQVTIKDVMIDHPLYGQLVGQIRVQNSNDVKQF
HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHHH
MQHVREAKGHLLSELTDGIHSHTLAADKMENIEKAKEQLKKVGILYKEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC
>Mature Secondary Structure
MKINRKVAIKNQLLETKTPIKAGTLAKQFEVSRQTIVGDIALLRAQGEPIISTSRGYEYA
CCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCHHH
KNHRFEEMIVCRHFPDQAEREMELIVKEQVTIKDVMIDHPLYGQLVGQIRVQNSNDVKQF
HCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHEECCCHHHHHH
MQHVREAKGHLLSELTDGIHSHTLAADKMENIEKAKEQLKKVGILYKEG
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8444804; 9384377 [H]