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The map label for this gene is lacM [H]

Identifier: 116492012

GI number: 116492012

Start: 242363

End: 243322

Strand: Reverse

Name: lacM [H]

Synonym: PEPE_0204

Alternate gene names: 116492012

Gene position: 243322-242363 (Counterclockwise)

Preceding gene: 116492013

Following gene: 116491995

Centisome position: 13.28

GC content: 44.38

Gene sequence:

>960_bases
ATGGATTACACAAATAATCAATTACACGTCATATATGGCGATGCCAGTTTAGGATTAGAAGGTCCTAACTTTCACTACCT
TTTTAGTTACGAACGAGGCGGGCTTGAATCTTTAGTGGTTAACCAAAAAGAGTGGCTCTACCGCACACCAACTCCGCTAT
TTTGGCGAGCAACTACTGATAATGATCATGGAAATGGTTTTGATGTTAAAGCTGCACAATGGTACGCAGCCGATCGATTC
ACAACTTGCCAAAAGATTGACTTAACAGTGGATGGGCAACTCGTTCAACCGCTTCCTATTGCTCCCCTTAATAATCGCTA
TACCAACCATGAAATGGCAAATCAAGTGGCGTTAACCTACCATTTCGTTACTCCGACGGTGCCAAGCACTTCGGTAAGCA
TTACCTATACGGTTGCTAGTGATGGTAATATTAAGATCATGACCCATTTTGCAGGACGTGAAGGTTTACCTGAGCTACCA
GCATTTGGACTACGTTTCATTATGCCCACGACCGCTACCGGTTTTGACTACCAAGGACTTTCTGGGGAAACTTATCCCGA
TCGTCTAGCAGGGGCAACTCAAGGTCAATTCCACGTTGACGGATTACCAGTGACTCCCTATCTTGTTCCTCAAGAATGTG
GCATGCACATGCAAACCAGTCAACTAACGGTAACTCGTTCGACTACTCAAAATAACGCCGATCAAAGCAAGCAACCTTTT
AGCCTTACTTTCAGCCAGGCAGATCAGCCGTTTGCTTTCAGTTGTTTACCATATACTGCTGCAGAGCTTGAACAAGCCAC
TCATCTTGAAGAACTACCATTACCAAGACGAACCGTGCTTTCGATCTACGGGGCGGTTCGCGGTGTCGGTGGAATCGATA
GTTGGGGAGCAGATGTTGAAGCAAAATACCACATCCCTGCTAACCAAGATTTAGATTTCAGTTTTAATATTCATTTCTAA

Upstream 100 bases:

>100_bases
GATTTCGATGAACGCCATTCCGACTATGAGTTTTCTGGTGATGGATTACTATTTGCTGATCGAACCCCTAAACCAGCAAT
GCAGGAGGTGAAATACTATT

Downstream 100 bases:

>100_bases
GATAAAGCCGATGCTGGAAAGATTTAAATTCTCCAACATCGGCTTTTAATATGCAAAAAAAGAACAATCAATGAATAAAT
CATTGATTGTCCTTTTAAAA

Product: Beta-galactosidase

Products: NA

Alternate protein names: Beta-gal small subunit; Lactase small subunit [H]

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MDYTNNQLHVIYGDASLGLEGPNFHYLFSYERGGLESLVVNQKEWLYRTPTPLFWRATTDNDHGNGFDVKAAQWYAADRF
TTCQKIDLTVDGQLVQPLPIAPLNNRYTNHEMANQVALTYHFVTPTVPSTSVSITYTVASDGNIKIMTHFAGREGLPELP
AFGLRFIMPTTATGFDYQGLSGETYPDRLAGATQGQFHVDGLPVTPYLVPQECGMHMQTSQLTVTRSTTQNNADQSKQPF
SLTFSQADQPFAFSCLPYTAAELEQATHLEELPLPRRTVLSIYGAVRGVGGIDSWGADVEAKYHIPANQDLDFSFNIHF

Sequences:

>Translated_319_residues
MDYTNNQLHVIYGDASLGLEGPNFHYLFSYERGGLESLVVNQKEWLYRTPTPLFWRATTDNDHGNGFDVKAAQWYAADRF
TTCQKIDLTVDGQLVQPLPIAPLNNRYTNHEMANQVALTYHFVTPTVPSTSVSITYTVASDGNIKIMTHFAGREGLPELP
AFGLRFIMPTTATGFDYQGLSGETYPDRLAGATQGQFHVDGLPVTPYLVPQECGMHMQTSQLTVTRSTTQNNADQSKQPF
SLTFSQADQPFAFSCLPYTAAELEQATHLEELPLPRRTVLSIYGAVRGVGGIDSWGADVEAKYHIPANQDLDFSFNIHF
>Mature_319_residues
MDYTNNQLHVIYGDASLGLEGPNFHYLFSYERGGLESLVVNQKEWLYRTPTPLFWRATTDNDHGNGFDVKAAQWYAADRF
TTCQKIDLTVDGQLVQPLPIAPLNNRYTNHEMANQVALTYHFVTPTVPSTSVSITYTVASDGNIKIMTHFAGREGLPELP
AFGLRFIMPTTATGFDYQGLSGETYPDRLAGATQGQFHVDGLPVTPYLVPQECGMHMQTSQLTVTRSTTQNNADQSKQPF
SLTFSQADQPFAFSCLPYTAAELEQATHLEELPLPRRTVLSIYGAVRGVGGIDSWGADVEAKYHIPANQDLDFSFNIHF

Specific function: Unknown

COG id: COG3250

COG function: function code G; Beta-galactosidase/beta-glucuronidase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial beta-galactosidase small subunit family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011013
- InterPro:   IPR014718
- InterPro:   IPR004199 [H]

Pfam domain/function: PF02929 Bgal_small_N [H]

EC number: =3.2.1.23 [H]

Molecular weight: Translated: 35472; Mature: 35472

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDYTNNQLHVIYGDASLGLEGPNFHYLFSYERGGLESLVVNQKEWLYRTPTPLFWRATTD
CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHEEECCHHHEEECCCCEEEEEECC
NDHGNGFDVKAAQWYAADRFTTCQKIDLTVDGQLVQPLPIAPLNNRYTNHEMANQVALTY
CCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCHHHHCEEEEEE
HFVTPTVPSTSVSITYTVASDGNIKIMTHFAGREGLPELPAFGLRFIMPTTATGFDYQGL
EEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC
SGETYPDRLAGATQGQFHVDGLPVTPYLVPQECGMHMQTSQLTVTRSTTQNNADQSKQPF
CCCCCHHHHCCCCCCCEEECCCCCCCEECHHHCCCEEECCEEEEEECCCCCCCCCCCCCE
SLTFSQADQPFAFSCLPYTAAELEQATHLEELPLPRRTVLSIYGAVRGVGGIDSWGADVE
EEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCE
AKYHIPANQDLDFSFNIHF
EEEECCCCCCCCEEEEEEC
>Mature Secondary Structure
MDYTNNQLHVIYGDASLGLEGPNFHYLFSYERGGLESLVVNQKEWLYRTPTPLFWRATTD
CCCCCCEEEEEECCCCCCCCCCCEEEEEEECCCCCHHEEECCHHHEEECCCCEEEEEECC
NDHGNGFDVKAAQWYAADRFTTCQKIDLTVDGQLVQPLPIAPLNNRYTNHEMANQVALTY
CCCCCCEEEEEEEEEECCCCCCEEEEEEEECCCEECCCCCCCCCCCCCCHHHHCEEEEEE
HFVTPTVPSTSVSITYTVASDGNIKIMTHFAGREGLPELPAFGLRFIMPTTATGFDYQGL
EEECCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCCCEEEEECCCCCCCCCCCC
SGETYPDRLAGATQGQFHVDGLPVTPYLVPQECGMHMQTSQLTVTRSTTQNNADQSKQPF
CCCCCHHHHCCCCCCCEEECCCCCCCEECHHHCCCEEECCEEEEEECCCCCCCCCCCCCE
SLTFSQADQPFAFSCLPYTAAELEQATHLEELPLPRRTVLSIYGAVRGVGGIDSWGADVE
EEEECCCCCCEEEEECCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCE
AKYHIPANQDLDFSFNIHF
EEEECCCCCCCCEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1624440 [H]