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The map label for this gene is yfeT [C]

Identifier: 116492005

GI number: 116492005

Start: 229595

End: 230176

Strand: Direct

Name: yfeT [C]

Synonym: PEPE_0194

Alternate gene names: 116492005

Gene position: 229595-230176 (Clockwise)

Preceding gene: 116492004

Following gene: 116492006

Centisome position: 12.53

GC content: 31.1

Gene sequence:

>582_bases
ATGAATTTCTTCGATATTGTAGAGCCCCATCTTAAAATGTTAACTAAAAATGAACAGGTTTTATTTGATTATGTTGTATC
AAATATGAATAAAATTAAAAATCAAAGTATCCGTGAAGTGGCAGGAGAAACGTATGTATCGACAGCGACCTTTCTAAGAT
TCGTGAAGAAGATAGGTTTTGCCGGATTCAGTGAATTTACAACGGTTATTAAATATACAGTATTAAATGAGAATACTAAA
AAGACCGAACCCACACCTTTTGAAGTTTCACAAACTGATTATCGTGAAGAGTATTTAAAAAATATTATAGAGTCTGTGCG
GGTTATCCCAATAAAGAAACTACATGAAATAACTAAAAAGCTTTCAGATCATCCTACGATTTATTTATTTTCAAAGGGAG
TTAGTAAGTATGCTGCGGAGTATGTCTACTATATTTATACGATGGCTGGATTCAATGTTAAGTACCCAAGAGATTATGAT
TTTAGACAGATTGCTAGTAAACAGGTTAAACCGAATGATTTGGTTTTTATTCTAACGTATAATGGGAAAAATTTAGAATT
TGTTGAAATGATTAAGAACTAG

Upstream 100 bases:

>100_bases
CCGCAAAGTAATTGGTTTTGCAGCCAATGAAATTTTAACTGGTGGCGGGGGATTGCATACGATTGTACTTACTATGCCAG
GACGTTGATGGAGGTAGTTT

Downstream 100 bases:

>100_bases
GGGAACCTTGAAGAAAAACCGTTTCTAATTTCAATAACCGAACCTGATAATAATACTATTCAAAATTTAAGTGACATTAA
TTTATACATTTTCTCAGATA

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 193; Mature: 193

Protein sequence:

>193_residues
MNFFDIVEPHLKMLTKNEQVLFDYVVSNMNKIKNQSIREVAGETYVSTATFLRFVKKIGFAGFSEFTTVIKYTVLNENTK
KTEPTPFEVSQTDYREEYLKNIIESVRVIPIKKLHEITKKLSDHPTIYLFSKGVSKYAAEYVYYIYTMAGFNVKYPRDYD
FRQIASKQVKPNDLVFILTYNGKNLEFVEMIKN

Sequences:

>Translated_193_residues
MNFFDIVEPHLKMLTKNEQVLFDYVVSNMNKIKNQSIREVAGETYVSTATFLRFVKKIGFAGFSEFTTVIKYTVLNENTK
KTEPTPFEVSQTDYREEYLKNIIESVRVIPIKKLHEITKKLSDHPTIYLFSKGVSKYAAEYVYYIYTMAGFNVKYPRDYD
FRQIASKQVKPNDLVFILTYNGKNLEFVEMIKN
>Mature_193_residues
MNFFDIVEPHLKMLTKNEQVLFDYVVSNMNKIKNQSIREVAGETYVSTATFLRFVKKIGFAGFSEFTTVIKYTVLNENTK
KTEPTPFEVSQTDYREEYLKNIIESVRVIPIKKLHEITKKLSDHPTIYLFSKGVSKYAAEYVYYIYTMAGFNVKYPRDYD
FRQIASKQVKPNDLVFILTYNGKNLEFVEMIKN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 SIS domain [H]

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000281
- InterPro:   IPR001347
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01418 HTH_6; PF01380 SIS [H]

EC number: NA

Molecular weight: Translated: 22672; Mature: 22672

Theoretical pI: Translated: 9.54; Mature: 9.54

Prosite motif: PS51071 HTH_RPIR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNFFDIVEPHLKMLTKNEQVLFDYVVSNMNKIKNQSIREVAGETYVSTATFLRFVKKIGF
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGFSEFTTVIKYTVLNENTKKTEPTPFEVSQTDYREEYLKNIIESVRVIPIKKLHEITKK
CCHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSDHPTIYLFSKGVSKYAAEYVYYIYTMAGFNVKYPRDYDFRQIASKQVKPNDLVFILTY
HCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEE
NGKNLEFVEMIKN
CCCCCHHHHHHCC
>Mature Secondary Structure
MNFFDIVEPHLKMLTKNEQVLFDYVVSNMNKIKNQSIREVAGETYVSTATFLRFVKKIGF
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
AGFSEFTTVIKYTVLNENTKKTEPTPFEVSQTDYREEYLKNIIESVRVIPIKKLHEITKK
CCHHHHHHHHHHHEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHH
LSDHPTIYLFSKGVSKYAAEYVYYIYTMAGFNVKYPRDYDFRQIASKQVKPNDLVFILTY
HCCCCEEEEEECCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCCCCCEEEEEEE
NGKNLEFVEMIKN
CCCCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7542800 [H]