Definition Pediococcus pentosaceus ATCC 25745, complete genome.
Accession NC_008525
Length 1,832,387

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The map label for this gene is 116491934

Identifier: 116491934

GI number: 116491934

Start: 144335

End: 144580

Strand: Reverse

Name: 116491934

Synonym: PEPE_0120

Alternate gene names: NA

Gene position: 144580-144335 (Counterclockwise)

Preceding gene: 116491935

Following gene: 116491933

Centisome position: 7.89

GC content: 36.18

Gene sequence:

>246_bases
ATGGAAAAATTAAGCGGAATTATTACTAGTGAAATTAAAAGTATCAGTTACTCTCCCATTTTATTTCGGTTTACCCTGAC
GAATATGCAAGATCAGCACTACAACATGCTGATTCATACCCATGCTCTAAACTTTTTTCAACAAGCCAAGATGGGATCAG
CTATTGAAGTATGGGCGGTCAAAAATAATCGCAATCAATACGTCATCCGACGTTTTAACGTCTTTGATTCGCATGTCTTA
GTATAA

Upstream 100 bases:

>100_bases
TTTAAATTAATGCCCACTTTGATTCCAAAATAGTCCGCTTGCTAATTGACAAAACGAACGTTTGTTCGTATAATTTACTT
ATCAAAAAGAGGTCGATTAT

Downstream 100 bases:

>100_bases
ATAGCTATCATAAAAACGCCATCCCTTCAGCAGGATGGCGTTTTTATTTACCTTCAGATTGGTTAATCCATCAAAAAATC
CCCAGTGCTAGATTTTCACC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 81; Mature: 81

Protein sequence:

>81_residues
MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAVKNNRNQYVIRRFNVFDSHVL
V

Sequences:

>Translated_81_residues
MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAVKNNRNQYVIRRFNVFDSHVL
V
>Mature_81_residues
MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAVKNNRNQYVIRRFNVFDSHVL
V

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 9533; Mature: 9533

Theoretical pI: Translated: 10.05; Mature: 10.05

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.9 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.9 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAV
CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEE
KNNRNQYVIRRFNVFDSHVLV
ECCCCEEEEEEECCCCCEECC
>Mature Secondary Structure
MEKLSGIITSEIKSISYSPILFRFTLTNMQDQHYNMLIHTHALNFFQQAKMGSAIEVWAV
CCCHHHHHHHHHHCCCCCCEEEEEEECCCCCCCEEEEEEHHHHHHHHHHCCCCEEEEEEE
KNNRNQYVIRRFNVFDSHVLV
ECCCCEEEEEEECCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA