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The map label for this gene is yqkD [H]

Identifier: 116491916

GI number: 116491916

Start: 107735

End: 108685

Strand: Direct

Name: yqkD [H]

Synonym: PEPE_0099

Alternate gene names: 116491916

Gene position: 107735-108685 (Clockwise)

Preceding gene: 116491915

Following gene: 116491917

Centisome position: 5.88

GC content: 40.9

Gene sequence:

>951_bases
ATGAATAAAAGTACTAAATATATGTTAGCTGGCTTAGGTGCCGCAGCTTTCGGAATTACTGCTGGAATGGGAATTGGCGG
ATATATTAGTTTTTTAGTTGGGATCAAAAATACGGAAAAAGCTAAGAATAAAGCCATTGAACGTTCACGATCTCAAGATA
ATAATGCCCTCAATATTGAATGGTTTAATAATTTAAATCCAGAAGAAATCAGTATGCTTAGTGAAGATGGCCTTCAATTG
CGAGCATCATTTTTACGACAACCAGAAGCCAAACAGTCTAAAAAGACGGTTATTTTAGCCCACGGATACCATCACGCCCG
GATGCAAATGATTCCGTATGCCAAAATCTTCTATAATATGGGCTACAACGTCTTGATGCCCGATGCACGCAGTCATGGTG
AAAGCGAAGGCAATCTAATTGGTTTTGGGTGGCTGGATCGCCGCGACTATGTACGTTGGGTTCAACGCGCTGTTTTATTA
ACCCATACGGATGAAAAAATTGTTTTAATGGGGATTAGCATGGGTGCCGCAACCGTGATTTCTGCGGCAGGGGAACCAGA
TATGGCGACTAACTTAACTGCTGTGATTGAAGATAGTAGTTTTAACCGTTTAGACAAACAATTCCGGCATCGTTTGAAAC
GCTACTATCATTTACCATCGCAAGAATTTGAGGCGATTGCTAGTGCATTAACCAAAAAAGAAGCTGGTTATTCATTTAAA
GAAGCTAATATTCAAGAGCAAGTTAAAAAAGTTCGAGTTCCGATCATGTTTATCCATGGCGAAGCCGATCGTTATGTTCC
AATCGAAATGCTGGATGATTTAGTGGAAGCAGCTCGTGTTCCTAGCCAAGTTTATTTGGTTGACCAAGCCGATCACGTGC
AAGCTCTCCCAACTAATCCGCATCGCTATCAAATCGAGGTAGCAAATTTTTTGGAGAAGTATGTAGACTAG

Upstream 100 bases:

>100_bases
ATACCACTTTTAACTCAAAAATTGATATTATAATGAGAGAAAGTTACCATTAACGGATAATGTTTTTTAGCAAGTTGGCT
AAAGATAAGGAGCGTTATTA

Downstream 100 bases:

>100_bases
CATGAATGAACAGATTAAATATTATTTTATTGTAAATAAATGGGCGGGAGCGCACCATTCAGCCCAGACGTGGGAGCGAC
TCCATCAACTCCTCGTGCAA

Product: alpha/beta fold family hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNKSTKYMLAGLGAAAFGITAGMGIGGYISFLVGIKNTEKAKNKAIERSRSQDNNALNIEWFNNLNPEEISMLSEDGLQL
RASFLRQPEAKQSKKTVILAHGYHHARMQMIPYAKIFYNMGYNVLMPDARSHGESEGNLIGFGWLDRRDYVRWVQRAVLL
THTDEKIVLMGISMGAATVISAAGEPDMATNLTAVIEDSSFNRLDKQFRHRLKRYYHLPSQEFEAIASALTKKEAGYSFK
EANIQEQVKKVRVPIMFIHGEADRYVPIEMLDDLVEAARVPSQVYLVDQADHVQALPTNPHRYQIEVANFLEKYVD

Sequences:

>Translated_316_residues
MNKSTKYMLAGLGAAAFGITAGMGIGGYISFLVGIKNTEKAKNKAIERSRSQDNNALNIEWFNNLNPEEISMLSEDGLQL
RASFLRQPEAKQSKKTVILAHGYHHARMQMIPYAKIFYNMGYNVLMPDARSHGESEGNLIGFGWLDRRDYVRWVQRAVLL
THTDEKIVLMGISMGAATVISAAGEPDMATNLTAVIEDSSFNRLDKQFRHRLKRYYHLPSQEFEAIASALTKKEAGYSFK
EANIQEQVKKVRVPIMFIHGEADRYVPIEMLDDLVEAARVPSQVYLVDQADHVQALPTNPHRYQIEVANFLEKYVD
>Mature_316_residues
MNKSTKYMLAGLGAAAFGITAGMGIGGYISFLVGIKNTEKAKNKAIERSRSQDNNALNIEWFNNLNPEEISMLSEDGLQL
RASFLRQPEAKQSKKTVILAHGYHHARMQMIPYAKIFYNMGYNVLMPDARSHGESEGNLIGFGWLDRRDYVRWVQRAVLL
THTDEKIVLMGISMGAATVISAAGEPDMATNLTAVIEDSSFNRLDKQFRHRLKRYYHLPSQEFEAIASALTKKEAGYSFK
EANIQEQVKKVRVPIMFIHGEADRYVPIEMLDDLVEAARVPSQVYLVDQADHVQALPTNPHRYQIEVANFLEKYVD

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001375 [H]

Pfam domain/function: PF00326 Peptidase_S9 [H]

EC number: NA

Molecular weight: Translated: 35716; Mature: 35716

Theoretical pI: Translated: 7.98; Mature: 7.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
4.1 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKSTKYMLAGLGAAAFGITAGMGIGGYISFLVGIKNTEKAKNKAIERSRSQDNNALNIE
CCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEE
WFNNLNPEEISMLSEDGLQLRASFLRQPEAKQSKKTVILAHGYHHARMQMIPYAKIFYNM
ECCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC
GYNVLMPDARSHGESEGNLIGFGWLDRRDYVRWVQRAVLLTHTDEKIVLMGISMGAATVI
CCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHEEECCCEEEEEEECCCHHHHH
SAAGEPDMATNLTAVIEDSSFNRLDKQFRHRLKRYYHLPSQEFEAIASALTKKEAGYSFK
HCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHH
EANIQEQVKKVRVPIMFIHGEADRYVPIEMLDDLVEAARVPSQVYLVDQADHVQALPTNP
HCCHHHHHHHHCCCEEEEECCCCCEECHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCC
HRYQIEVANFLEKYVD
CEEEEEHHHHHHHHCC
>Mature Secondary Structure
MNKSTKYMLAGLGAAAFGITAGMGIGGYISFLVGIKNTEKAKNKAIERSRSQDNNALNIE
CCCCCCCHHHHCCHHHHHHHHCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEEE
WFNNLNPEEISMLSEDGLQLRASFLRQPEAKQSKKTVILAHGYHHARMQMIPYAKIFYNM
ECCCCCHHHHHHHHHCCHHHHHHHHCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHC
GYNVLMPDARSHGESEGNLIGFGWLDRRDYVRWVQRAVLLTHTDEKIVLMGISMGAATVI
CCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHEEECCCEEEEEEECCCHHHHH
SAAGEPDMATNLTAVIEDSSFNRLDKQFRHRLKRYYHLPSQEFEAIASALTKKEAGYSFK
HCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCHH
EANIQEQVKKVRVPIMFIHGEADRYVPIEMLDDLVEAARVPSQVYLVDQADHVQALPTNP
HCCHHHHHHHHCCCEEEEECCCCCEECHHHHHHHHHHHCCCCEEEEEECCCCCEECCCCC
HRYQIEVANFLEKYVD
CEEEEEHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8969508; 9384377 [H]