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The map label for this gene is yulF [H]

Identifier: 116491914

GI number: 116491914

Start: 105791

End: 106765

Strand: Direct

Name: yulF [H]

Synonym: PEPE_0096

Alternate gene names: 116491914

Gene position: 105791-106765 (Clockwise)

Preceding gene: 116491913

Following gene: 116491915

Centisome position: 5.77

GC content: 37.64

Gene sequence:

>975_bases
ATGAAATTAGGAATTGTTGGAGCAGGAATGATTGTAAAGGACTTTCTTACAATGACGCCGTTGTTACCAGAGATTGAATT
AAAAGCTATCACAGGAACCCCTCATGGTATAGATGACATGGAAAAATTACAAAAGCAATATGGGATTGATCGTGTATATA
CGGACATCGATGAATGTCTTGCAAATGAAGAAATTGATACCATCTATGTTGCTGTTCCCAATCATTTACATTTTGCTTTT
GCTAAAAAAGCCCTCGAAGCCGGTAAGAATGTTATCTGCGAAAAACCGTTCACTTTGAATTTAGCGGAGTTAGAAGAATT
AGCAGAACTAGCCCAAACGAAGCAATTAATTTTGCTGGAAGCTATCACCAATCAATACATGATGAATTATCAAAAAATTA
AAGAAGCCGTTCCAACCCTAGGCGAAATTAAGGTGATTGAATGTAACTATTCGCAATATTCATCTCGCTATGATGCTTTT
AAAGCAGGTGAAGTCCTACCAGCTTTTAACCCTAAGTTCGGTGGTGGGGCTTTGATGGACATCAATATTTATAACATTCA
TTTTGTTGTGGGGCTGTTGGGCGCCCCATCAAGCGTCAAATATCTAGCTAATATTGAAAAGGATATCGATACTTCAGGAA
TATTAATCTTAAATTATCCCGATACCAAAGTGGTTTGTATCGGAGCTAAAGACTCTACGGCTACGATTCGTTCGACGATT
CAAGGTACGAAAGGTTCAGTAATTGTGAATGGAGCAACCAATGTTCTTGATAATTTCGATATTGAAAGTAAAGCAGGAAT
TGAAAACTTTGATTTTAAACAAAATTCGCATCGCATGTATGAAGAATTCAAGGCATTTCAACGAATTATTGCAGAAAAGG
ATTTAAAAGAGGCCGCTCTACGTCTTCAACATAGTGAAGAGGTGCTTCGAGTTGTTGAGCAAGCTTTGGCAGATGCTCAC
ATTCAGCTAGGTTAA

Upstream 100 bases:

>100_bases
TTAAAGATGAAGAAACTTTATTGCAAATAAAAATGCTAGAAACAGGCATCAAGAAAATGCAAAAAAGCGAGTTTTAAAAG
GATAAATAGGAGAGCATGCG

Downstream 100 bases:

>100_bases
TAATGAGGTAAACAAATGAAAGAGATTGAAAAGTTAAAACAAGGTTTAGAATATTGCTTTTTAGATGAAGAAGTTGCCAA
GCTTAAGCAAGCAGCATTAA

Product: dehydrogenase related protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 324; Mature: 324

Protein sequence:

>324_residues
MKLGIVGAGMIVKDFLTMTPLLPEIELKAITGTPHGIDDMEKLQKQYGIDRVYTDIDECLANEEIDTIYVAVPNHLHFAF
AKKALEAGKNVICEKPFTLNLAELEELAELAQTKQLILLEAITNQYMMNYQKIKEAVPTLGEIKVIECNYSQYSSRYDAF
KAGEVLPAFNPKFGGGALMDINIYNIHFVVGLLGAPSSVKYLANIEKDIDTSGILILNYPDTKVVCIGAKDSTATIRSTI
QGTKGSVIVNGATNVLDNFDIESKAGIENFDFKQNSHRMYEEFKAFQRIIAEKDLKEAALRLQHSEEVLRVVEQALADAH
IQLG

Sequences:

>Translated_324_residues
MKLGIVGAGMIVKDFLTMTPLLPEIELKAITGTPHGIDDMEKLQKQYGIDRVYTDIDECLANEEIDTIYVAVPNHLHFAF
AKKALEAGKNVICEKPFTLNLAELEELAELAQTKQLILLEAITNQYMMNYQKIKEAVPTLGEIKVIECNYSQYSSRYDAF
KAGEVLPAFNPKFGGGALMDINIYNIHFVVGLLGAPSSVKYLANIEKDIDTSGILILNYPDTKVVCIGAKDSTATIRSTI
QGTKGSVIVNGATNVLDNFDIESKAGIENFDFKQNSHRMYEEFKAFQRIIAEKDLKEAALRLQHSEEVLRVVEQALADAH
IQLG
>Mature_324_residues
MKLGIVGAGMIVKDFLTMTPLLPEIELKAITGTPHGIDDMEKLQKQYGIDRVYTDIDECLANEEIDTIYVAVPNHLHFAF
AKKALEAGKNVICEKPFTLNLAELEELAELAQTKQLILLEAITNQYMMNYQKIKEAVPTLGEIKVIECNYSQYSSRYDAF
KAGEVLPAFNPKFGGGALMDINIYNIHFVVGLLGAPSSVKYLANIEKDIDTSGILILNYPDTKVVCIGAKDSTATIRSTI
QGTKGSVIVNGATNVLDNFDIESKAGIENFDFKQNSHRMYEEFKAFQRIIAEKDLKEAALRLQHSEEVLRVVEQALADAH
IQLG

Specific function: Unknown

COG id: COG0673

COG function: function code R; Predicted dehydrogenases and related proteins

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the gfo/idh/mocA family [H]

Homologues:

Organism=Homo sapiens, GI7657212, Length=256, Percent_Identity=25.390625, Blast_Score=92, Evalue=5e-19,
Organism=Escherichia coli, GI145693182, Length=250, Percent_Identity=30, Blast_Score=152, Evalue=4e-38,
Organism=Escherichia coli, GI87081947, Length=260, Percent_Identity=26.1538461538462, Blast_Score=84, Evalue=2e-17,
Organism=Escherichia coli, GI1789848, Length=150, Percent_Identity=32, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787574, Length=201, Percent_Identity=25.3731343283582, Blast_Score=66, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24581117, Length=255, Percent_Identity=24.7058823529412, Blast_Score=97, Evalue=2e-20,
Organism=Drosophila melanogaster, GI24581115, Length=258, Percent_Identity=25.5813953488372, Blast_Score=86, Evalue=3e-17,
Organism=Drosophila melanogaster, GI24584727, Length=257, Percent_Identity=21.011673151751, Blast_Score=71, Evalue=1e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016040
- InterPro:   IPR000683 [H]

Pfam domain/function: PF01408 GFO_IDH_MocA [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 35950; Mature: 35950

Theoretical pI: Translated: 4.83; Mature: 4.83

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLGIVGAGMIVKDFLTMTPLLPEIELKAITGTPHGIDDMEKLQKQYGIDRVYTDIDECL
CCEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHH
ANEEIDTIYVAVPNHLHFAFAKKALEAGKNVICEKPFTLNLAELEELAELAQTKQLILLE
CCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHHHHHHHH
AITNQYMMNYQKIKEAVPTLGEIKVIECNYSQYSSRYDAFKAGEVLPAFNPKFGGGALMD
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCHHHCCCCCCCCCCCCCCCEEEE
INIYNIHFVVGLLGAPSSVKYLANIEKDIDTSGILILNYPDTKVVCIGAKDSTATIRSTI
EEEEEEEEEEHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHH
QGTKGSVIVNGATNVLDNFDIESKAGIENFDFKQNSHRMYEEFKAFQRIIAEKDLKEAAL
CCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLQHSEEVLRVVEQALADAHIQLG
HHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure
MKLGIVGAGMIVKDFLTMTPLLPEIELKAITGTPHGIDDMEKLQKQYGIDRVYTDIDECL
CCEEEEECHHHHHHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHCHHHHHHHHHHHH
ANEEIDTIYVAVPNHLHFAFAKKALEAGKNVICEKPFTLNLAELEELAELAQTKQLILLE
CCCCCCEEEEECCCCHHHHHHHHHHHCCCCEEECCCCEECHHHHHHHHHHHHHHHHHHHH
AITNQYMMNYQKIKEAVPTLGEIKVIECNYSQYSSRYDAFKAGEVLPAFNPKFGGGALMD
HHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHHHCHHHCCCCCCCCCCCCCCCEEEE
INIYNIHFVVGLLGAPSSVKYLANIEKDIDTSGILILNYPDTKVVCIGAKDSTATIRSTI
EEEEEEEEEEHHHCCCHHHHHHHHHHHCCCCCCEEEEECCCCEEEEEECCCCHHHHHHHH
QGTKGSVIVNGATNVLDNFDIESKAGIENFDFKQNSHRMYEEFKAFQRIIAEKDLKEAAL
CCCCCCEEECCCHHHHHCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
RLQHSEEVLRVVEQALADAHIQLG
HHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9274030; 9384377 [H]