| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
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The map label for this gene is tagE [H]
Identifier: 116491885
GI number: 116491885
Start: 71661
End: 73109
Strand: Direct
Name: tagE [H]
Synonym: PEPE_0067
Alternate gene names: 116491885
Gene position: 71661-73109 (Clockwise)
Preceding gene: 116491884
Following gene: 116491886
Centisome position: 3.91
GC content: 36.65
Gene sequence:
>1449_bases ATGAATTTTTTTGTTAATGAAGCAATGGGAATTGGAAATTCTGGAGTAGAACATGCGCAATTTTATCGAGCTAAGCGTTT CGATCAGGCTGGATTAGATTATCGTTTTATATTTATGGAATTAGTGGATAATCTACACGAAGCCATGGATAAATGGAATT TAAGTGATAATCAGGTCATAAACATTTGGGAGTATTTTGTGTATGGGGATGAATACGCTCTAAATGGTTTAGAAAAAAGA AGTGCAACAGAACACCAGTCGGTCATTGATAGTACGCAAACGATTCGTTCAGATAATAAGATTACTTCGTCAGGGATGCG AGTTGTACGCCATTACGTTAAATATACAAATCCGAAAAAGAACCCTCCATTACTGGTGAGTGTCGATCGGGTGGAAATAT ATAACAATGCTACTAATGAACGAAAAATTATGTTTGAACAATTAACGGATCCACATAACGAGGGTGAGGTTGAGATCAAA AATATTCATTTATATAATCAACCGGAACAGTTATTTTTCCCTAATTTAATTCAATTCCGAAGATATTTTTTCCATCGATT AGAAAAGCTTTTTCCTGAGAAAAATGTATTTATATTAGATCGTGGCGAAGCTAATGAAGTGGCCTTGATGGATGATGATG TTAGAGATCAAAACAGACGTAAATTAATTTCGATTGTCCATGCGGACCACTTAGGAGATCGCAATGATCCGGCTAACCCA TTGTGGAATAACTATTATGAATACGTTCTAACTCACCTTGATCAATTAGAAGGATTAGTTGTGGCAACCGAATTACAACG GCAAGATTTGTTAGTCGATTTCCCAAATTTGGCTAAAAAAATCGTTACAATTCCGGTGGGGGGAGTCCAAGATGTTCGCC AAAAATTAGTACCTAAAGCACACGCAGATTTTAAATTAGTTACAATTTCCCGTTTGGCTGAAGAAAAGCATATCGATTTG ATTATTAAAGCAGTCATTAATCTTCATCAAGCCGGTAAAAAAGTTAGCTTGGATATTTATGGTGCTGGTGGAGAAGAGAA AAAACTTAAAAAGATTATTGATGAAAGTAAGGCTGGATCATACATTGAACTAAAGGGACTTACGCATCATGCCGATCAAG TTTATCCAAAATATGATGCATTTGTATCCGCCTCATTTTCCGAAGGCTTTGGCCTAACCTACATTGAAGCTTTGAATGCT GGATTACCAGTTGTGACCTTTAAGGCACGCTTTGGCGCAATGGAAATGATTGAAGATGGTGTGAATGGTTTCTTAATGGA CTTCAAGCGTGAAGATACTGACTATAATGTCAGTCAATTAGAAGTAGGAATTGAAAAACTAATGAATACCGATATCGCCA CGATGGAAGACGCTATTCTTCAATCCGTAGACAAGTTTCGGGATAGCGTAATTGCCGATAAATGGAGGAAATTGATTGAT GAACTATGA
Upstream 100 bases:
>100_bases AATGTTAGTGGAGAAAACTGCAAGTATCGAGTTAGCAAAAATCTTGCATTATTATCGAGGGCAATCTTTCTAATAATCTA GGTAACATTCGGAGGAAAAT
Downstream 100 bases:
>100_bases GTTGGTGAGTGTTTTAAGAGTTGAGACAGATAATTGGAAGCAGCAAAAGCAGCGGGCAATCAATAATAATAGTAAAGTAA TCACGCTTCTTCCCGATCCT
Product: glycosyltransferase
Products: NA
Alternate protein names: Major teichoic acid biosynthesis protein E [H]
Number of amino acids: Translated: 482; Mature: 482
Protein sequence:
>482_residues MNFFVNEAMGIGNSGVEHAQFYRAKRFDQAGLDYRFIFMELVDNLHEAMDKWNLSDNQVINIWEYFVYGDEYALNGLEKR SATEHQSVIDSTQTIRSDNKITSSGMRVVRHYVKYTNPKKNPPLLVSVDRVEIYNNATNERKIMFEQLTDPHNEGEVEIK NIHLYNQPEQLFFPNLIQFRRYFFHRLEKLFPEKNVFILDRGEANEVALMDDDVRDQNRRKLISIVHADHLGDRNDPANP LWNNYYEYVLTHLDQLEGLVVATELQRQDLLVDFPNLAKKIVTIPVGGVQDVRQKLVPKAHADFKLVTISRLAEEKHIDL IIKAVINLHQAGKKVSLDIYGAGGEEKKLKKIIDESKAGSYIELKGLTHHADQVYPKYDAFVSASFSEGFGLTYIEALNA GLPVVTFKARFGAMEMIEDGVNGFLMDFKREDTDYNVSQLEVGIEKLMNTDIATMEDAILQSVDKFRDSVIADKWRKLID EL
Sequences:
>Translated_482_residues MNFFVNEAMGIGNSGVEHAQFYRAKRFDQAGLDYRFIFMELVDNLHEAMDKWNLSDNQVINIWEYFVYGDEYALNGLEKR SATEHQSVIDSTQTIRSDNKITSSGMRVVRHYVKYTNPKKNPPLLVSVDRVEIYNNATNERKIMFEQLTDPHNEGEVEIK NIHLYNQPEQLFFPNLIQFRRYFFHRLEKLFPEKNVFILDRGEANEVALMDDDVRDQNRRKLISIVHADHLGDRNDPANP LWNNYYEYVLTHLDQLEGLVVATELQRQDLLVDFPNLAKKIVTIPVGGVQDVRQKLVPKAHADFKLVTISRLAEEKHIDL IIKAVINLHQAGKKVSLDIYGAGGEEKKLKKIIDESKAGSYIELKGLTHHADQVYPKYDAFVSASFSEGFGLTYIEALNA GLPVVTFKARFGAMEMIEDGVNGFLMDFKREDTDYNVSQLEVGIEKLMNTDIATMEDAILQSVDKFRDSVIADKWRKLID EL >Mature_482_residues MNFFVNEAMGIGNSGVEHAQFYRAKRFDQAGLDYRFIFMELVDNLHEAMDKWNLSDNQVINIWEYFVYGDEYALNGLEKR SATEHQSVIDSTQTIRSDNKITSSGMRVVRHYVKYTNPKKNPPLLVSVDRVEIYNNATNERKIMFEQLTDPHNEGEVEIK NIHLYNQPEQLFFPNLIQFRRYFFHRLEKLFPEKNVFILDRGEANEVALMDDDVRDQNRRKLISIVHADHLGDRNDPANP LWNNYYEYVLTHLDQLEGLVVATELQRQDLLVDFPNLAKKIVTIPVGGVQDVRQKLVPKAHADFKLVTISRLAEEKHIDL IIKAVINLHQAGKKVSLDIYGAGGEEKKLKKIIDESKAGSYIELKGLTHHADQVYPKYDAFVSASFSEGFGLTYIEALNA GLPVVTFKARFGAMEMIEDGVNGFLMDFKREDTDYNVSQLEVGIEKLMNTDIATMEDAILQSVDKFRDSVIADKWRKLID EL
Specific function: Slime polysaccharide colanic acid biosynthesis. [C]
COG id: COG0438
COG function: function code M; Glycosyltransferase
Gene ontology:
Cell location: Cytoplasm (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyltransferase 1 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015397 - InterPro: IPR001296 [H]
Pfam domain/function: PF09318 DUF1975; PF00534 Glycos_transf_1 [H]
EC number: =2.4.1.52 [H]
Molecular weight: Translated: 55504; Mature: 55504
Theoretical pI: Translated: 5.38; Mature: 5.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.5 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNFFVNEAMGIGNSGVEHAQFYRAKRFDQAGLDYRFIFMELVDNLHEAMDKWNLSDNQVI CCEECCHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE NIWEYFVYGDEYALNGLEKRSATEHQSVIDSTQTIRSDNKITSSGMRVVRHYVKYTNPKK EEEEHEEECCHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC NPPLLVSVDRVEIYNNATNERKIMFEQLTDPHNEGEVEIKNIHLYNQPEQLFFPNLIQFR CCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHCHHHHHHH RYFFHRLEKLFPEKNVFILDRGEANEVALMDDDVRDQNRRKLISIVHADHLGDRNDPANP HHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCH LWNNYYEYVLTHLDQLEGLVVATELQRQDLLVDFPNLAKKIVTIPVGGVQDVRQKLVPKA HHHHHHHHHHHHHHHHCCEEEEEHHHHCCCEEECHHHHHHEEEECCCCHHHHHHHHCCCC HADFKLVTISRLAEEKHIDLIIKAVINLHQAGKKVSLDIYGAGGEEKKLKKIIDESKAGS CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCCCC YIELKGLTHHADQVYPKYDAFVSASFSEGFGLTYIEALNAGLPVVTFKARFGAMEMIEDG EEEECCCCHHHHHCCCCHHHHEECCCCCCCCHHHHHHHCCCCCEEEEHHHHCHHHHHHCC VNGFLMDFKREDTDYNVSQLEVGIEKLMNTDIATMEDAILQSVDKFRDSVIADKWRKLID CCCEEEHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EL CC >Mature Secondary Structure MNFFVNEAMGIGNSGVEHAQFYRAKRFDQAGLDYRFIFMELVDNLHEAMDKWNLSDNQVI CCEECCHHCCCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCEE NIWEYFVYGDEYALNGLEKRSATEHQSVIDSTQTIRSDNKITSSGMRVVRHYVKYTNPKK EEEEHEEECCHHHHCCHHHHCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCC NPPLLVSVDRVEIYNNATNERKIMFEQLTDPHNEGEVEIKNIHLYNQPEQLFFPNLIQFR CCCEEEEEEEEEEECCCCCHHHHHHHHHCCCCCCCCEEEEEEEEECCCHHHHCHHHHHHH RYFFHRLEKLFPEKNVFILDRGEANEVALMDDDVRDQNRRKLISIVHADHLGDRNDPANP HHHHHHHHHHCCCCCEEEEECCCCCCEEEECCCCCCHHHHHHHHHHHHHHCCCCCCCCCH LWNNYYEYVLTHLDQLEGLVVATELQRQDLLVDFPNLAKKIVTIPVGGVQDVRQKLVPKA HHHHHHHHHHHHHHHHCCEEEEEHHHHCCCEEECHHHHHHEEEECCCCHHHHHHHHCCCC HADFKLVTISRLAEEKHIDLIIKAVINLHQAGKKVSLDIYGAGGEEKKLKKIIDESKAGS CCCEEEEHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHCCCCC YIELKGLTHHADQVYPKYDAFVSASFSEGFGLTYIEALNAGLPVVTFKARFGAMEMIEDG EEEECCCCHHHHHCCCCHHHHEECCCCCCCCHHHHHHHCCCCCEEEEHHHHCHHHHHHCC VNGFLMDFKREDTDYNVSQLEVGIEKLMNTDIATMEDAILQSVDKFRDSVIADKWRKLID CCCEEEHHCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH EL CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2507871; 9384377 [H]