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The map label for this gene is yybT [H]

Identifier: 116491828

GI number: 116491828

Start: 10367

End: 12367

Strand: Direct

Name: yybT [H]

Synonym: PEPE_0010

Alternate gene names: 116491828

Gene position: 10367-12367 (Clockwise)

Preceding gene: 116491827

Following gene: 116491829

Centisome position: 0.57

GC content: 40.93

Gene sequence:

>2001_bases
ATGAAATTAGTAGATCATCTACCTGCATTTATCCGTAACCCGCGGGTCGGGATTTTAACAGCAGTTATTATTTTGCTGTC
GTTGATTGGGCTGGGATTAGCTTTTTATATTAACTTATTAATCGGCATCATCATGCTAGTATTGGTTATTGTTACTGGCA
TTTTTAGTGTTCGCACGTTGCGTTTACTGAGTGATGAGACTGATAAATATATTTCTGAATTGTCGTTTCGAATTGATCAG
GCTGAAGAAGACGCTACGTTGTCTATGCCAATTGGAATTTTAATTTATAGTGAACAGCATCGAGTGGAATGGGTTAACCC
TAATTTCCAAAGTTATTTTGAAGGACAAAAACTTTTGGGACATCCATTGGATGAAATTGATGAAGATTTGGCGAAGATTA
TTGAAGAACATCAAGATGACGAGAAAGTTAGCCGTGTGAAATGGAACGATCACGTTTTTGATATTTCAATTCAAAAGGAT
GATCGCGTAGTTTACTTCCTAGATTCGACTAAATACGCGAAAATGGAAGAGCAATTCGATGACCGTCAAGTGGTAATTGG
TCAAATCTTTATTGATAACTATGATGAAATTACACAGTCGATGGCTGATTCGGAAGTTTCTAATTTAAACAACTTTGTTA
CCAACCAGATTTCTAGTTGGGCGCAATCGTTTGGGATGTATTTAAGGCGCGTTGATGATGATCATTTCTTTGTCATCATG
TACAACGAAACGTTAGCTAAGGTGGAAGAGGATAGTTTTAAGCTCTTGGATACTATCCGAGAAGCAACTTCTAAACAAAA
CTCTCCAGTTACATTAAGTATCGGGATTGCTTACGGGGATGATAATCTTAATAAGCTTGCCGATGTTTCGCAAAGTAATC
TGGATTTAGCGCTAGGACGAGGTGGTGACCAAGTTGTCGTCAAAGCTGAAGATGAACAAGCTCGTTTCTACGGCGGTAAA
ACTAATCCGATGGAAAAACGGACTCGCGTTCGAGCGCGGATGATTGGACAAGCCGTTCAAGAATTAATGAACCAAGCAGA
TCAAGTCTTTGTAATGGGGCACTCCCATGCGGACTTAGATTCAGTGGGTTCAGCGCTCGGGATTCGGCGAATTGCGCAAA
TGAATAAAAAAGAGTGTTGGATTGTCTTAGACCAAGAAGGCGTGCATTCGGATGTAGCGCGTTTGATTGAAAAAATGGAT
GAGCATGAAGACCTTAAAGAGTCCATTATTAGTGCAGATCAAGCCGTAGAGCTCGCTAATAGCCAAAGTTTGTTAGTGAT
GGTTGATCATTCTAAACGTTCCATAACGACATCTGAGGAGCTATTTGATAAGCTTAGTAATCGGGTGATTATCATTGATC
ATCATCGCCGTGGAACGGAGTTTCCAGAAAATCCCGTGTTGGTTTACATTGAACCATATGCATCATCGACGGGTGAGTTG
ATTACGGAAATGTTTGAATACCAGTCCCATGATGGTGAACCAATTCAACCGATTGAGGCCACTGCTATTTTGGCAGGGAT
TGAAGTGGATACTAAATCGTTCACGGAACGTACGGGGACAAGAACTTTTGATGCAGCCAGTTATCTTCGTTCAGTGGGGG
CTAACGAGAAGACGATTCGTTACCTCTTAAAAGAGAATGTTGATAGCTATATGCAACGAAACCATTTAATTGATACAATG
CAGTTTATTGAAGATAAATATGCAATTTGTACCGGTGAAGATGATCGAATGTATGATCCAGTGATTGCGGCTCAGGCAGC
CGATTCACTACTGAATATTTCAGGCGTAGAAGCCTCATTTGTGATCACACGTCGTGGAGACCATGCTGTGGGTATTTCGG
CGCGAAGCGCAGGAACGGAAAACGTCCAGGTTATCATGGAAAAACTTGGTGGAGGCGGTCATTTAGCAATGGCAGCAACT
CAGATAGAAGATGTGAGTGTTGAAGAAGCCGAGCAACAATTGGTTGAAATTTTACAAGAAAATCAAAAAGATGAGGAGTG
A

Upstream 100 bases:

>100_bases
TATTTTTATTAGAATAACCTTCCAACAAACGATTTTAATTATTGGTTATAAGTATGGTAAAATCAGAGATAGTTAGACAC
AATTTTTTAGGAGAAGTGCT

Downstream 100 bases:

>100_bases
TTCTGATGAAAGTAATTTTTTTGGAAGATGTCAAAGGTAAGGGGAAACGTGGCGAAGTTAAGAACGTTTCCGATGGTTAC
GCCCAAAATTTCTTAATTAA

Product: signal protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 666; Mature: 666

Protein sequence:

>666_residues
MKLVDHLPAFIRNPRVGILTAVIILLSLIGLGLAFYINLLIGIIMLVLVIVTGIFSVRTLRLLSDETDKYISELSFRIDQ
AEEDATLSMPIGILIYSEQHRVEWVNPNFQSYFEGQKLLGHPLDEIDEDLAKIIEEHQDDEKVSRVKWNDHVFDISIQKD
DRVVYFLDSTKYAKMEEQFDDRQVVIGQIFIDNYDEITQSMADSEVSNLNNFVTNQISSWAQSFGMYLRRVDDDHFFVIM
YNETLAKVEEDSFKLLDTIREATSKQNSPVTLSIGIAYGDDNLNKLADVSQSNLDLALGRGGDQVVVKAEDEQARFYGGK
TNPMEKRTRVRARMIGQAVQELMNQADQVFVMGHSHADLDSVGSALGIRRIAQMNKKECWIVLDQEGVHSDVARLIEKMD
EHEDLKESIISADQAVELANSQSLLVMVDHSKRSITTSEELFDKLSNRVIIIDHHRRGTEFPENPVLVYIEPYASSTGEL
ITEMFEYQSHDGEPIQPIEATAILAGIEVDTKSFTERTGTRTFDAASYLRSVGANEKTIRYLLKENVDSYMQRNHLIDTM
QFIEDKYAICTGEDDRMYDPVIAAQAADSLLNISGVEASFVITRRGDHAVGISARSAGTENVQVIMEKLGGGGHLAMAAT
QIEDVSVEEAEQQLVEILQENQKDEE

Sequences:

>Translated_666_residues
MKLVDHLPAFIRNPRVGILTAVIILLSLIGLGLAFYINLLIGIIMLVLVIVTGIFSVRTLRLLSDETDKYISELSFRIDQ
AEEDATLSMPIGILIYSEQHRVEWVNPNFQSYFEGQKLLGHPLDEIDEDLAKIIEEHQDDEKVSRVKWNDHVFDISIQKD
DRVVYFLDSTKYAKMEEQFDDRQVVIGQIFIDNYDEITQSMADSEVSNLNNFVTNQISSWAQSFGMYLRRVDDDHFFVIM
YNETLAKVEEDSFKLLDTIREATSKQNSPVTLSIGIAYGDDNLNKLADVSQSNLDLALGRGGDQVVVKAEDEQARFYGGK
TNPMEKRTRVRARMIGQAVQELMNQADQVFVMGHSHADLDSVGSALGIRRIAQMNKKECWIVLDQEGVHSDVARLIEKMD
EHEDLKESIISADQAVELANSQSLLVMVDHSKRSITTSEELFDKLSNRVIIIDHHRRGTEFPENPVLVYIEPYASSTGEL
ITEMFEYQSHDGEPIQPIEATAILAGIEVDTKSFTERTGTRTFDAASYLRSVGANEKTIRYLLKENVDSYMQRNHLIDTM
QFIEDKYAICTGEDDRMYDPVIAAQAADSLLNISGVEASFVITRRGDHAVGISARSAGTENVQVIMEKLGGGGHLAMAAT
QIEDVSVEEAEQQLVEILQENQKDEE
>Mature_666_residues
MKLVDHLPAFIRNPRVGILTAVIILLSLIGLGLAFYINLLIGIIMLVLVIVTGIFSVRTLRLLSDETDKYISELSFRIDQ
AEEDATLSMPIGILIYSEQHRVEWVNPNFQSYFEGQKLLGHPLDEIDEDLAKIIEEHQDDEKVSRVKWNDHVFDISIQKD
DRVVYFLDSTKYAKMEEQFDDRQVVIGQIFIDNYDEITQSMADSEVSNLNNFVTNQISSWAQSFGMYLRRVDDDHFFVIM
YNETLAKVEEDSFKLLDTIREATSKQNSPVTLSIGIAYGDDNLNKLADVSQSNLDLALGRGGDQVVVKAEDEQARFYGGK
TNPMEKRTRVRARMIGQAVQELMNQADQVFVMGHSHADLDSVGSALGIRRIAQMNKKECWIVLDQEGVHSDVARLIEKMD
EHEDLKESIISADQAVELANSQSLLVMVDHSKRSITTSEELFDKLSNRVIIIDHHRRGTEFPENPVLVYIEPYASSTGEL
ITEMFEYQSHDGEPIQPIEATAILAGIEVDTKSFTERTGTRTFDAASYLRSVGANEKTIRYLLKENVDSYMQRNHLIDTM
QFIEDKYAICTGEDDRMYDPVIAAQAADSLLNISGVEASFVITRRGDHAVGISARSAGTENVQVIMEKLGGGGHLAMAAT
QIEDVSVEEAEQQLVEILQENQKDEE

Specific function: Unknown

COG id: COG3887

COG function: function code T; Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 GGDEF domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000160
- InterPro:   IPR003156
- InterPro:   IPR001667
- InterPro:   IPR014528 [H]

Pfam domain/function: PF01368 DHH; PF02272 DHHA1 [H]

EC number: NA

Molecular weight: Translated: 75080; Mature: 75080

Theoretical pI: Translated: 4.37; Mature: 4.37

Prosite motif: PS50887 GGDEF

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLVDHLPAFIRNPRVGILTAVIILLSLIGLGLAFYINLLIGIIMLVLVIVTGIFSVRTL
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLSDETDKYISELSFRIDQAEEDATLSMPIGILIYSEQHRVEWVNPNFQSYFEGQKLLG
HHHHCHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCCCEEEECCCHHHHHCCHHHHC
HPLDEIDEDLAKIIEEHQDDEKVSRVKWNDHVFDISIQKDDRVVYFLDSTKYAKMEEQFD
CCHHHHHHHHHHHHHHCCCCHHHHHEEECCEEEEEEEECCCEEEEEECCCCHHHHHHHCC
DRQVVIGQIFIDNYDEITQSMADSEVSNLNNFVTNQISSWAQSFGMYLRRVDDDHFFVIM
CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
YNETLAKVEEDSFKLLDTIREATSKQNSPVTLSIGIAYGDDNLNKLADVSQSNLDLALGR
ECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCEEEECC
GGDQVVVKAEDEQARFYGGKTNPMEKRTRVRARMIGQAVQELMNQADQVFVMGHSHADLD
CCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
SVGSALGIRRIAQMNKKECWIVLDQEGVHSDVARLIEKMDEHEDLKESIISADQAVELAN
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SQSLLVMVDHSKRSITTSEELFDKLSNRVIIIDHHRRGTEFPENPVLVYIEPYASSTGEL
CCEEEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHH
ITEMFEYQSHDGEPIQPIEATAILAGIEVDTKSFTERTGTRTFDAASYLRSVGANEKTIR
HHHHHHHHCCCCCCCCCHHHHHEEEECEECCHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
YLLKENVDSYMQRNHLIDTMQFIEDKYAICTGEDDRMYDPVIAAQAADSLLNISGVEASF
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEE
VITRRGDHAVGISARSAGTENVQVIMEKLGGGGHLAMAATQIEDVSVEEAEQQLVEILQE
EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHH
NQKDEE
CCCCCC
>Mature Secondary Structure
MKLVDHLPAFIRNPRVGILTAVIILLSLIGLGLAFYINLLIGIIMLVLVIVTGIFSVRTL
CCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RLLSDETDKYISELSFRIDQAEEDATLSMPIGILIYSEQHRVEWVNPNFQSYFEGQKLLG
HHHHCHHHHHHHHHHHHHCCCCCCCEEECCEEEEEECCCCCEEEECCCHHHHHCCHHHHC
HPLDEIDEDLAKIIEEHQDDEKVSRVKWNDHVFDISIQKDDRVVYFLDSTKYAKMEEQFD
CCHHHHHHHHHHHHHHCCCCHHHHHEEECCEEEEEEEECCCEEEEEECCCCHHHHHHHCC
DRQVVIGQIFIDNYDEITQSMADSEVSNLNNFVTNQISSWAQSFGMYLRRVDDDHFFVIM
CCEEEEEEEEECCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEEE
YNETLAKVEEDSFKLLDTIREATSKQNSPVTLSIGIAYGDDNLNKLADVSQSNLDLALGR
ECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEEECCCCHHHHHHCCCCCCEEEECC
GGDQVVVKAEDEQARFYGGKTNPMEKRTRVRARMIGQAVQELMNQADQVFVMGHSHADLD
CCCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCCCCHH
SVGSALGIRRIAQMNKKECWIVLDQEGVHSDVARLIEKMDEHEDLKESIISADQAVELAN
HHHHHHHHHHHHHCCCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
SQSLLVMVDHSKRSITTSEELFDKLSNRVIIIDHHRRGTEFPENPVLVYIEPYASSTGEL
CCEEEEEEECCCCCCCCHHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEECCCCCHHHH
ITEMFEYQSHDGEPIQPIEATAILAGIEVDTKSFTERTGTRTFDAASYLRSVGANEKTIR
HHHHHHHHCCCCCCCCCHHHHHEEEECEECCHHHHHHCCCCCHHHHHHHHHCCCCHHHHH
YLLKENVDSYMQRNHLIDTMQFIEDKYAICTGEDDRMYDPVIAAQAADSLLNISGVEASF
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCHHHHHHHHHHHHCCCCCCEEE
VITRRGDHAVGISARSAGTENVQVIMEKLGGGGHLAMAATQIEDVSVEEAEQQLVEILQE
EEEECCCCEEEEECCCCCCHHHHHHHHHCCCCCEEEEEEHHHHCCCHHHHHHHHHHHHHH
NQKDEE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 7584024; 9384377 [H]