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The map label for this gene is yidC [H]

Identifier: 116514957

GI number: 116514957

Start: 8129

End: 8986

Strand: Direct

Name: yidC [H]

Synonym: BCc_007

Alternate gene names: 116514957

Gene position: 8129-8986 (Clockwise)

Preceding gene: 116514956

Following gene: 116514958

Centisome position: 1.95

GC content: 17.83

Gene sequence:

>858_bases
ATGTTACAAAAATATTTTTTCACTACTAGAATATTAAAATATCTAAAATTATATACTTTTTATTCACATCAATTAAATGA
TTTTTTTTCTTCTTTTAATTTTATTTCTAAGTTGTCTTATTTTAAATCGTATATTTTATATAATATATTTTCTAATTTTT
TATGTAAATTAGAAATGCAAATAAATTTATCAAAAATTTCTGATAATTTATCATTAATAAATCGATATGGAAAATTACAT
ATTATTGCTTATCCTTTATTTCACTTATTAAATTTTTTTTATAAATTTTTTAATAATTGGGGAATAGCAATTATTTTTGT
TACTATTCTTATTAAAATTATTATATATCCTTTGACTAAATTACAATATACTTCAGTTTTACAAATGAAATTATTACAAC
CAAAAATTGATATATTAAAAAATAAATATGCTGATAATAAAGATAAAATGAATAAAAAAATTTTAGAATTATATTCTTCT
AAAAAATTTAATCCATTTAATAGTTTTTTTTCATTTTTAATTCAAACTCCTATATTTTTAGCTTTTTATTCTGTTTTGTC
TTCTTCTGTAGAATTAAAAAATGCACCTTTTTTTTTATGGATTAAAGACTTATCTAGTTATGATCCATATCATGTATTAC
CATTACTAATGGGTATTAGTATTTTATTAACACAAATAAGTGAGATTGATGATAAAACTACTAGAAAAAGAAAATTTTTA
AGTTTTTTTTCTGTTTTTTTTGCAGCCTTTTTTTTATGGTTTCCGTCTGGATTAATTTTATATTATATTACAAGTAATAT
AGTTACATTAATACAGCATTGGTTTATACGTATACAGTTTTTCAAAAAAAATACTTAA

Upstream 100 bases:

>100_bases
TTTATATATTTTATAAACAATTATAAATAATTAGAAAATATAATTTTTAATATAATGATTATAAAAGAAAATAATAATAA
ATTAAAATAGGTAAATTACT

Downstream 100 bases:

>100_bases
TTTTATTAAAATTTTTTTTTTATTTTATTAAATTATTTAAAAAAGAGTTTTATTATATATGGAATAAAATAGTTATGAAA
TTTTTTGATACTATAGTTTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 285; Mature: 285

Protein sequence:

>285_residues
MLQKYFFTTRILKYLKLYTFYSHQLNDFFSSFNFISKLSYFKSYILYNIFSNFLCKLEMQINLSKISDNLSLINRYGKLH
IIAYPLFHLLNFFYKFFNNWGIAIIFVTILIKIIIYPLTKLQYTSVLQMKLLQPKIDILKNKYADNKDKMNKKILELYSS
KKFNPFNSFFSFLIQTPIFLAFYSVLSSSVELKNAPFFLWIKDLSSYDPYHVLPLLMGISILLTQISEIDDKTTRKRKFL
SFFSVFFAAFFLWFPSGLILYYITSNIVTLIQHWFIRIQFFKKNT

Sequences:

>Translated_285_residues
MLQKYFFTTRILKYLKLYTFYSHQLNDFFSSFNFISKLSYFKSYILYNIFSNFLCKLEMQINLSKISDNLSLINRYGKLH
IIAYPLFHLLNFFYKFFNNWGIAIIFVTILIKIIIYPLTKLQYTSVLQMKLLQPKIDILKNKYADNKDKMNKKILELYSS
KKFNPFNSFFSFLIQTPIFLAFYSVLSSSVELKNAPFFLWIKDLSSYDPYHVLPLLMGISILLTQISEIDDKTTRKRKFL
SFFSVFFAAFFLWFPSGLILYYITSNIVTLIQHWFIRIQFFKKNT
>Mature_285_residues
MLQKYFFTTRILKYLKLYTFYSHQLNDFFSSFNFISKLSYFKSYILYNIFSNFLCKLEMQINLSKISDNLSLINRYGKLH
IIAYPLFHLLNFFYKFFNNWGIAIIFVTILIKIIIYPLTKLQYTSVLQMKLLQPKIDILKNKYADNKDKMNKKILELYSS
KKFNPFNSFFSFLIQTPIFLAFYSVLSSSVELKNAPFFLWIKDLSSYDPYHVLPLLMGISILLTQISEIDDKTTRKRKFL
SFFSVFFAAFFLWFPSGLILYYITSNIVTLIQHWFIRIQFFKKNT

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1790140, Length=285, Percent_Identity=40, Blast_Score=230, Evalue=9e-62,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR019998
- InterPro:   IPR001708 [H]

Pfam domain/function: PF02096 60KD_IMP [H]

EC number: NA

Molecular weight: Translated: 34197; Mature: 34197

Theoretical pI: Translated: 10.28; Mature: 10.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC
>Mature Secondary Structure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HHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA