| Definition | Leptospira borgpetersenii serovar Hardjo-bovis JB197 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008511 |
| Length | 299,762 |
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The map label for this gene is pstS [H]
Identifier: 116332641
GI number: 116332641
Start: 253739
End: 254644
Strand: Direct
Name: pstS [H]
Synonym: LBJ_4221
Alternate gene names: 116332641
Gene position: 253739-254644 (Clockwise)
Preceding gene: 116332636
Following gene: 116332642
Centisome position: 84.65
GC content: 42.05
Gene sequence:
>906_bases ATGAAATTTAAGTTTATGATTCTTACCGCAATCGTCGGCACACTTGTCGGAAATTGTAAGCCAAAAGAAACGATCACGGT CACCGGTTCGGAAACAATGCACGTAATGCTTCAAATGATCGGTTTGGAATATTCGCGTAAGAAATCGGAATTTCAAGTCC TAGTTCACGGCGGAGGATCGATCGAAGGAATCGAAAAATTATTTCAAGACAAAACGGACATTGCCGCAGCCAGCAGGCCT CTTACAGAAGCGGAGCTCAAGGAATTCAATTCCAAAGGTAAGTTCGAATCACTTGTGGTCGCCTATGACGGAATTGCAAT TATTGTTCATCCATCCAATCCGGTTCGTAGAATCAGCTTGGAAGAGGCTTCTAAAATTTTTGCGGGAGAAATCACGGACT GGTCCAAGGTCGGGGGAAAGTCTGAAAAGATAGACGTATTGATTCGAAACGACAAATCCGGAACCGCGGCCTACTTTGAA ACTCACGTTCTCAAACAAAAAGATTTAGGGATTAAAAACTTCGAGGCAAGAAAGAATTCGGTATATTCCAAAACCGCTAA AATCGTAGCGGACAATGACGCGATGACTGCAGCGATTGATTCCAACCCGAATACGATCGGATTTATGGGAATGGGAAGCG CTCTTTTTGAAAACAAAGGTAAAGTGCGTGCTTTAGAATATTCTCTTTCTGGAAAAGGTCCTTTCGTGATTCCTAACATC GAAAACGTGTACAACAGAAAGTATCAACTTTCCAGAGGACTCTATCTATTTTATCTTTCCGATCACGGACAAAAGATAGA CAATTTCATCACGTATGTTACAAGCGAAGAAGGACAGAAGGCGGTTCTCAAAAGCGGATATTTAAGAGGAACTCTTCCAA CCGTAGAAGTTGAAGTCAAAAGATAG
Upstream 100 bases:
>100_bases GTATGAATTTGTAATAATTCAATCTTGAATTGTAATGGACTTTTTTTATACGGGAAGTAGTATCCCGAACAACTTTTCAT AGGAACGTAAAAATAAGCGT
Downstream 100 bases:
>100_bases GTGAACAAAAAAATCTATTCGCTAATTCTCATTACAAAATACGAAAAAATCTCCGCATTCTAGCGATTAAACACCTGATT TCTTATTAACGCTACTGATC
Product: PstS ABC-type phosphate transport system protein
Products: NA
Alternate protein names: PBP [H]
Number of amino acids: Translated: 301; Mature: 301
Protein sequence:
>301_residues MKFKFMILTAIVGTLVGNCKPKETITVTGSETMHVMLQMIGLEYSRKKSEFQVLVHGGGSIEGIEKLFQDKTDIAAASRP LTEAELKEFNSKGKFESLVVAYDGIAIIVHPSNPVRRISLEEASKIFAGEITDWSKVGGKSEKIDVLIRNDKSGTAAYFE THVLKQKDLGIKNFEARKNSVYSKTAKIVADNDAMTAAIDSNPNTIGFMGMGSALFENKGKVRALEYSLSGKGPFVIPNI ENVYNRKYQLSRGLYLFYLSDHGQKIDNFITYVTSEEGQKAVLKSGYLRGTLPTVEVEVKR
Sequences:
>Translated_301_residues MKFKFMILTAIVGTLVGNCKPKETITVTGSETMHVMLQMIGLEYSRKKSEFQVLVHGGGSIEGIEKLFQDKTDIAAASRP LTEAELKEFNSKGKFESLVVAYDGIAIIVHPSNPVRRISLEEASKIFAGEITDWSKVGGKSEKIDVLIRNDKSGTAAYFE THVLKQKDLGIKNFEARKNSVYSKTAKIVADNDAMTAAIDSNPNTIGFMGMGSALFENKGKVRALEYSLSGKGPFVIPNI ENVYNRKYQLSRGLYLFYLSDHGQKIDNFITYVTSEEGQKAVLKSGYLRGTLPTVEVEVKR >Mature_301_residues MKFKFMILTAIVGTLVGNCKPKETITVTGSETMHVMLQMIGLEYSRKKSEFQVLVHGGGSIEGIEKLFQDKTDIAAASRP LTEAELKEFNSKGKFESLVVAYDGIAIIVHPSNPVRRISLEEASKIFAGEITDWSKVGGKSEKIDVLIRNDKSGTAAYFE THVLKQKDLGIKNFEARKNSVYSKTAKIVADNDAMTAAIDSNPNTIGFMGMGSALFENKGKVRALEYSLSGKGPFVIPNI ENVYNRKYQLSRGLYLFYLSDHGQKIDNFITYVTSEEGQKAVLKSGYLRGTLPTVEVEVKR
Specific function: Part of the ABC transporter complex pstSACB involved in phosphate import [H]
COG id: COG0226
COG function: function code P; ABC-type phosphate transport system, periplasmic component
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Probable) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the pstS family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR011862 [H]
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33297; Mature: 33297
Theoretical pI: Translated: 9.57; Mature: 9.57
Prosite motif: PS00430 TONB_DEPENDENT_REC_1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 3.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKFKFMILTAIVGTLVGNCKPKETITVTGSETMHVMLQMIGLEYSRKKSEFQVLVHGGGS CEEEEHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCHHCCCCCEEEEEEECCCC IEGIEKLFQDKTDIAAASRPLTEAELKEFNSKGKFESLVVAYDGIAIIVHPSNPVRRISL HHHHHHHHHCCHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCEEEEH EEASKIFAGEITDWSKVGGKSEKIDVLIRNDKSGTAAYFETHVLKQKDLGIKNFEARKNS HHHHHHHCCCCCCHHHCCCCCCEEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCHHHHHH VYSKTAKIVADNDAMTAAIDSNPNTIGFMGMGSALFENKGKVRALEYSLSGKGPFVIPNI HHHHEEEEEECCCCEEEEECCCCCEEEEEECCHHHHCCCCCEEEEEEEECCCCCEEECCH ENVYNRKYQLSRGLYLFYLSDHGQKIDNFITYVTSEEGQKAVLKSGYLRGTLPTVEVEVK HHHHCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHCCCEECCCCEEEEEEC R C >Mature Secondary Structure MKFKFMILTAIVGTLVGNCKPKETITVTGSETMHVMLQMIGLEYSRKKSEFQVLVHGGGS CEEEEHHHHHHHHHHHCCCCCCCEEEEECCHHHHHHHHHHCCHHCCCCCEEEEEEECCCC IEGIEKLFQDKTDIAAASRPLTEAELKEFNSKGKFESLVVAYDGIAIIVHPSNPVRRISL HHHHHHHHHCCHHHHHCCCCCCHHHHHHCCCCCCCEEEEEEECCEEEEEECCCCCEEEEH EEASKIFAGEITDWSKVGGKSEKIDVLIRNDKSGTAAYFETHVLKQKDLGIKNFEARKNS HHHHHHHCCCCCCHHHCCCCCCEEEEEEECCCCCCEEEHHHHHHHHCCCCCCCCHHHHHH VYSKTAKIVADNDAMTAAIDSNPNTIGFMGMGSALFENKGKVRALEYSLSGKGPFVIPNI HHHHEEEEEECCCCEEEEECCCCCEEEEEECCHHHHCCCCCEEEEEEEECCCCCEEECCH ENVYNRKYQLSRGLYLFYLSDHGQKIDNFITYVTSEEGQKAVLKSGYLRGTLPTVEVEVK HHHHCCEEEECCCEEEEEEECCCCCCCCEEEEEECCCCCHHHHHCCCEECCCCEEEEEEC R C
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA