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The map label for this gene is yagA [C]

Identifier: 116332622

GI number: 116332622

Start: 230343

End: 230705

Strand: Direct

Name: yagA [C]

Synonym: LBJ_4199

Alternate gene names: 116332622

Gene position: 230343-230705 (Clockwise)

Preceding gene: 116332620

Following gene: 116332623

Centisome position: 76.84

GC content: 39.39

Gene sequence:

>363_bases
ATGCACCGGACTTTAAAACAAGAAACGGCTTTGCCTCCGCGTTCTTCTCTTAAAGAACAACAAGAAGCATTTGATCGGTT
CAGAATTGAATACAATTTAGAAAGACCGCATGAGGCTTTGGAATATAAAACTCCAGAAAAGATCTATATACCTTCAGAAA
GAGTTTTTCCAATCAGAATTCCTGAAATAGCGTATGCTACCAATATAGTAGTTGAAACAGTCTTAGACGACGGGACTGCC
AAATACGGTCCATATAGAATCTTCTTTGGTTCTCCATTGATCGGCGAACGGGTTGGTTTTGAAGAAGTCACAGAGCGTTT
GTGTAAGATCTATTTTACGAATGCAGTTCTCTGGGTATGTTAG

Upstream 100 bases:

>100_bases
TGCAGGCTTAACAAAACTTTCCGTTTGGCGGTTAAAGTTAGGAATCAGATTAGAGCGGATAGAACCAGGTAAGCCGCAAC
AGAATGGTCGTCATGAAAGG

Downstream 100 bases:

>100_bases
ATTTACTTACAGGAAAAGTATTGAAATACAAAACGTCTGTGTACAACTACAGCGAATAAAGTGTAATCCATGTGTCCAGT
CTAGAGTGTTACGGATGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: Transposase; ISHne2 Transposase; Transposase/Integrase

Number of amino acids: Translated: 120; Mature: 120

Protein sequence:

>120_residues
MHRTLKQETALPPRSSLKEQQEAFDRFRIEYNLERPHEALEYKTPEKIYIPSERVFPIRIPEIAYATNIVVETVLDDGTA
KYGPYRIFFGSPLIGERVGFEEVTERLCKIYFTNAVLWVC

Sequences:

>Translated_120_residues
MHRTLKQETALPPRSSLKEQQEAFDRFRIEYNLERPHEALEYKTPEKIYIPSERVFPIRIPEIAYATNIVVETVLDDGTA
KYGPYRIFFGSPLIGERVGFEEVTERLCKIYFTNAVLWVC
>Mature_120_residues
MHRTLKQETALPPRSSLKEQQEAFDRFRIEYNLERPHEALEYKTPEKIYIPSERVFPIRIPEIAYATNIVVETVLDDGTA
KYGPYRIFFGSPLIGERVGFEEVTERLCKIYFTNAVLWVC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 14085; Mature: 14085

Theoretical pI: Translated: 5.80; Mature: 5.80

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
0.8 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHRTLKQETALPPRSSLKEQQEAFDRFRIEYNLERPHEALEYKTPEKIYIPSERVFPIRI
CCCCCCHHHCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHCCCCCCEEECCCCCEEEEEC
PEIAYATNIVVETVLDDGTAKYGPYRIFFGSPLIGERVGFEEVTERLCKIYFTNAVLWVC
CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEEC
>Mature Secondary Structure
MHRTLKQETALPPRSSLKEQQEAFDRFRIEYNLERPHEALEYKTPEKIYIPSERVFPIRI
CCCCCCHHHCCCCHHHHHHHHHHHHHEEEEECCCCCHHHHCCCCCCEEECCCCCEEEEEC
PEIAYATNIVVETVLDDGTAKYGPYRIFFGSPLIGERVGFEEVTERLCKIYFTNAVLWVC
CCHHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHHEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA